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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.13120 (5 seq.)
>C181164853
CP028374
Gammaproteobacteria
Candidatus Purcelliella pentastirinorum OLIH [CP028374]
369052
368961
-
Ser
GGA
-
¡û
>C231533603
CP110496
Unclassified
Candidatus Purcelliella pentastirinorum [CP110496]
362061
362150
+
Ser
GGA
-
¡û
>C231533646
CP110497
Unclassified
Candidatus Purcelliella pentastirinorum [CP110497]
12932
12843
-
Ser
GGA
-
¡û
>C231533668
CP110498
Unclassified
Candidatus Purcelliella pentastirinorum [CP110498]
369070
368979
-
Ser
GGA
-
¡û
>C231533698
CP110499
Unclassified
Candidatus Purcelliella pentastirinorum [CP110499]
375683
375592
-
Ser
GGA
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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