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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.141635 (21 seq.)
>C181000140
AP014609
Bacteroidota
Blattabacterium cuenoti BPAY [AP014609]
300158
300233
+
His
GTG
-
¡û
>C191000052
AP014608
Bacteroidota
Blattabacterium cuenoti STAT [AP014608]
299393
299470
+
His
GTG
-
¡û
>C141003943
CP005488
Bacteroidota
Blattabacterium sp. [Nauphoeta cinerea] [CP005488]
348450
348373
-
His
GTG
[Ensembl]
¡û
>C211119877
CP059182
Bacteroidota
Blattabacterium cuenoti THEREAreg [CP059182]
296674
296749
+
His
GTG
-
¡û
>C211119942
CP059188
Bacteroidota
Blattabacterium cuenoti PLATYZsp [CP059188]
305072
305147
+
His
GTG
-
¡û
>C211119976
CP059191
Bacteroidota
Blattabacterium cuenoti PARATEMsp [CP059191]
298450
298525
+
His
GTG
-
¡û
>C211120010
CP059194
Bacteroidota
Blattabacterium cuenoti OPISTHori [CP059194]
301021
301096
+
His
GTG
-
¡û
>C211120044
CP059196
Bacteroidota
Blattabacterium cuenoti METHAsp [CP059196]
302464
302541
+
His
GTG
-
¡û
>C211120078
CP059197
Bacteroidota
Blattabacterium cuenoti MELANOZsp [CP059197]
302250
302325
+
His
GTG
-
¡û
>C211120144
CP059201
Bacteroidota
Blattabacterium cuenoti GYNAcap [CP059201]
294011
294086
+
His
GTG
-
¡û
>C211120177
CP059202
Bacteroidota
Blattabacterium cuenoti GROMPgra [CP059202]
291840
291915
+
His
GTG
-
¡û
>C211120244
CP059205
Bacteroidota
Blattabacterium cuenoti ESCALves [CP059205]
293132
293207
+
His
GTG
-
¡û
>C211120275
CP059206
Bacteroidota
Blattabacterium cuenoti EPILAmay [CP059206]
297918
297993
+
His
GTG
-
¡û
>C211120308
CP059208
Bacteroidota
Blattabacterium cuenoti ECTOBIsp [CP059208]
288122
288197
+
His
GTG
-
¡û
>C211120340
CP059212
Bacteroidota
Blattabacterium cuenoti COSMOsp [CP059212]
302773
302848
+
His
GTG
-
¡û
>C10101592
CP001429
Bacteroidota
Blattabacterium sp. [Periplaneta americana] str. BPLAN [CP001429]
301467
301543
+
His
GTG
[Ensembl]
¡û
>C10101644
CP001487
Bacteroidota
Blattabacterium sp. [Blattella germanica] str. Bge Alboraia [CP001487]
354430
354354
-
His
GTG
[Ensembl]
¡û
>C121004027
CP003000
Bacteroidota
Blattabacterium sp. [Mastotermes darwiniensis] str. MADAR [CP003000]
99352
99276
-
His
GTG
[Ensembl]
¡û
>C121014236
CP003535
Bacteroidota
Blattabacterium sp. [Blaberus giganteus] BGIGA [CP003535]
297183
297259
+
His
GTG
[Ensembl]
¡û
>C131000700
AP012548
Bacteroidota
Blattabacterium cuenoti BPAA [AP012548]
300285
300361
+
His
GTG
[Ensembl]
¡û
>C131004622
CP003605
Bacteroidota
Blattabacterium sp. [Blatta orientalis] str. Tarazona [CP003605]
354710
354634
-
His
GTG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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