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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.144625 (4 seq.)
>WENV183665861
ORJL010498554
[ORJL] groundwater metagenome; groundwater
21957
22031
+
Arg
TCT
[ENA]
¡û
>WENV183680687
ORMF010212553
[ORMF] groundwater metagenome; groundwater
220376
220450
+
Arg
TCT
[ENA]
¡û
>W1910765809
MNVX01000036
Unclassified
Candidatus Pacearchaeota archaeon CG1_02_32_21 [MNVX]
42206
42280
+
Arg
TCT
[ENA]
¡û
>W2010888136
MNVX01000036
Unclassified
Candidatus Pacearchaeota archaeon CG1_02_32_21 [MNVX]
42206
42280
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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