This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.145317 (4 seq.)
>WENV170018687
BBPD01000345
[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
35890
35816
-
Pro
CGG
[ENA]
¡û
>WENV170019967
BBPE01002000
[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
38121
38047
-
Pro
CGG
[ENA]
¡û
>WENV170021244
BBPF01004516
[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
11506
11432
-
Pro
CGG
[ENA]
¡û
>WENV170021788
BBPG01001997
[BBPG] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
42209
42283
+
Pro
CGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK