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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.145365 (8 seq.)
>WENV180618008
OCQA01128470
[OCQA] human gut metagenome; human gut
240
163
-
Pro
GGG
[ENA]
¡û
>WENV180942122
ODTZ01044907
[ODTZ] human metagenome; G_DNA_Stool
201
278
+
Pro
GGG
[ENA]
¡û
>WENV181089305
OEBA01020329
[OEBA] human metagenome; G_DNA_Stool
1197
1274
+
Pro
GGG
[ENA]
¡û
>WENV181688599
OGOX01088652
[OGOX] human gut metagenome; faeces
181
258
+
Pro
GGG
[ENA]
¡û
>WENV181751303
OGQP01045298
[OGQP] human gut metagenome; faeces
614
691
+
Pro
GGG
[ENA]
¡û
>WENV182072460
OHFM01056017
[OHFM] human gut metagenome; feces
400
477
+
Pro
GGG
[ENA]
¡û
>WENV183045144
OLGE01005613
[OLGE] human gut metagenome; faeces
7311
7388
+
Pro
GGG
[ENA]
¡û
>WENV170050200
CDZB01017939
[CDZB] gut metagenome; human stools
70
147
+
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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