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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146641 (4 seq.)
>WENV170009089
APHM01021264
[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
2079
2005
-
Glu
CTC
[ENA]
¡û
>W2012375965
WMEH01000001
Methanobacteriota
Nanohaloarchaea archaeon E09 [WMEH]
20851
20925
+
Glu
CTC
[ENA]
¡û
>W2012375995
WMEK01000003
Methanobacteriota
Nanohaloarchaea archaeon M06 [WMEK]
44571
44645
+
Glu
CTC
[ENA]
¡û
>W1610002226
AEIY01000157
Unclassified
hypersaline lake metagenome sp. J07AB43 [AEIY]
12186
12112
-
Glu
CTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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