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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146662 (4 seq.)
>W1910006894
BBMP01000001
Euryarchaeota
Halococcus sediminicola CBA1101 [BBMP]
40244
40167
-
Thr
TGT
[ENA]
¡û
>W2010075252
BBMP01000001
Euryarchaeota
Halococcus sediminicola CBA1101 [BBMP]
40244
40167
-
Thr
TGT
[ENA]
¡û
>W1610014654
AOMF01000049
Euryarchaeota
Halococcus thailandensis JCM 13552 [AOMF]
755
679
-
Thr
TGT
[ENA]
¡û
>W1610014656
AOMF01000102
Euryarchaeota
Halococcus thailandensis JCM 13552 [AOMF]
2293
2217
-
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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