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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146764 (7 seq.)
>W1810057229
PDHU01000001
Actinomycetota
Micromonospora sp. WMMA1996 [PDHU]
183553
183631
+
Leu
TAG
[ENA]
¡û
>W1810418071
PYPS01000074
Actinomycetota
Micromonospora sp. RP3T [PYPS]
745
668
-
Leu
TAG
[ENA]
¡û
>W2010364381
CADEAU010000393
Actinomycetota
Micromonospora maritima [CADEAU]
1692
1767
+
Leu
TAG
[ENA]
¡û
>W2110591998
JAHCDI010000004
Actinomycetota
Micromonospora sp. Llam7 [JAHCDI]
3857287
3857362
+
Leu
TAG
[ENA]
¡û
>W1610506895
FLRH01000004
Actinomycetota
Micromonospora sediminicola [FLRH]
1224549
1224627
+
Leu
TAG
[ENA]
¡û
>W1710499113
FLRH01000004
Actinomycetota
Micromonospora sediminicola [FLRH]
1224549
1224627
+
Leu
TAG
[ENA]
¡û
>W1710504535
FMIA01000002
Actinomycetota
Micromonospora yangpuensis [FMIA]
1563972
1563895
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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