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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146785 (12 seq.)
>W1730034123
MSEN01000012
Gammaproteobacteria
Vibrio cholerae [MSEN]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034130
MSEP01000012
Gammaproteobacteria
Vibrio cholerae [MSEP]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034134
MSEQ01000011
Gammaproteobacteria
Vibrio cholerae [MSEQ]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034137
MSER01000012
Gammaproteobacteria
Vibrio cholerae [MSER]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034143
MSET01000012
Gammaproteobacteria
Vibrio cholerae [MSET]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034153
MSEW01000012
Gammaproteobacteria
Vibrio cholerae [MSEW]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034162
MSEZ01000012
Gammaproteobacteria
Vibrio cholerae [MSEZ]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034201
MSGF01000012
Gammaproteobacteria
Vibrio cholerae [MSGF]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034212
MSGI01000012
Gammaproteobacteria
Vibrio cholerae [MSGI]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730034237
MSGN01000012
Gammaproteobacteria
Vibrio cholerae [MSGN]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730036002
MWGW01000044
Gammaproteobacteria
Vibrio cholerae [MWGW]
155040
154964
-
Pro
TGG
[ENA]
¡û
>W1730036079
MWIB01000080
Gammaproteobacteria
Vibrio cholerae [MWIB]
50822
50746
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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