tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.146852 (127 seq.)
>W1710802917 LJYE01000037 Alphaproteobacteria Bradyrhizobium pachyrhizi [LJYE] 39753 39829 + Asp GTC [ENA] ¡û
>W1710854926 LLXX01000033 Alphaproteobacteria Bradyrhizobium valentinum [LLXX] 136552 136628 + Asp GTC [ENA] ¡û
>W1710854990 LLXY01000167 Alphaproteobacteria Bradyrhizobium valentinum [LLXY] 29141 29217 + Asp GTC [ENA] ¡û
>W1710855077 LLXZ01000219 Alphaproteobacteria Bradyrhizobium jicamae [LLXZ] 15919 15995 + Asp GTC [ENA] ¡û
>W1710855101 LLYA01000155 Alphaproteobacteria Bradyrhizobium retamae [LLYA] 49564 49640 + Asp GTC [ENA] ¡û
>W1710855131 LLYB01000040 Alphaproteobacteria Bradyrhizobium lablabi [LLYB] 17996 18072 + Asp GTC [ENA] ¡û
>W1710891423 LNCU01000096 Alphaproteobacteria Bradyrhizobium macuxiense BR 10303 [LNCU] 35143 35219 + Asp GTC [ENA] ¡û
>W1710893740 LNFA01000285 Alphaproteobacteria Rhizobiales bacterium Ga0077549 [LNFA] 13604 13528 - Asp GTC [ENA] ¡û
>W1711193139 LWUI01000011 Alphaproteobacteria Bradyrhizobium elkanii [LWUI] 254297 254221 - Asp GTC [ENA] ¡û
>W1711206742 LXEM01000022 Alphaproteobacteria Bradyrhizobium elkanii [LXEM] 203354 203430 + Asp GTC [ENA] ¡û
>W1711317156 MAXB01000012 Alphaproteobacteria Bradyrhizobium paxllaeri [MAXB] 104157 104233 + Asp GTC [ENA] ¡û
>W1711317230 MAXC01000033 Alphaproteobacteria Bradyrhizobium sp. LMTR 3 [MAXC] 318910 318986 + Asp GTC [ENA] ¡û
>W1711487046 MKFI01000001 Alphaproteobacteria Bradyrhizobium mercantei SEMIA 6399 [MKFI] 127977 127901 - Asp GTC [ENA] ¡û
>W1711501355 MKRN01000046 Alphaproteobacteria Nitrobacter sp. 62-13 [MKRN] 3056 2980 - Asp GTC [ENA] ¡û
>W1711502244 MKSM01000071 Alphaproteobacteria Nitrobacter sp. 62-23 [MKSM] 10522 10446 - Asp GTC [ENA] ¡û
>W1711575774 MNJL01000113 Alphaproteobacteria Alphaproteobacteria bacterium 13_1_20CM_3_64_12 [MNJL] 8089 8165 + Asp GTC [ENA] ¡û
>W1711612980 MOXO01000025 Alphaproteobacteria Bradyrhizobium elkanii [MOXO] 22966 22890 - Asp GTC [ENA] ¡û
>W1711636724 MPVQ01000020 Alphaproteobacteria Bradyrhizobium brasilense UFLA 03-321 [MPVQ] 79919 79995 + Asp GTC [ENA] ¡û
>W1711795372 MWPQ01000039 Alphaproteobacteria Nitrobacter vulgaris [MWPQ] 70308 70232 - Asp GTC [ENA] ¡û
>W131164110 ARAG01000009 Alphaproteobacteria Bradyrhizobium elkanii USDA 76 [ARAG] 1325836 1325760 - Asp GTC [ENA] ¡û
>W131184839 ARTG01000005 Alphaproteobacteria Hyphomicrobium zavarzinii ATCC 27496 [ARTG] 62686 62762 + Asp GTC [ENA] ¡û
>W131226877 AUES01000004 Alphaproteobacteria Bradyrhizobium sp. URHA0002 [AUES] 162726 162802 + Asp GTC [ENA] ¡û
>W131228564 AUGA01000033 Alphaproteobacteria Bradyrhizobium sp. th.b2 [AUGA] 79119 79195 + Asp GTC [ENA] ¡û
>C014948 CP000319 Alphaproteobacteria Nitrobacter hamburgensis X14 [CP000319] 2471687 2471611 - Asp GTC [Ensembl] ¡û
>C015380 CP000115 Alphaproteobacteria Nitrobacter winogradskyi Nb-255 [CP000115] 2073412 2073336 - Asp GTC [Ensembl] ¡û
>w013004 AAMY01000019 Alphaproteobacteria Nitrobacter sp. Nb-311A [AAMY] 69933 70011 + Asp GTC [ENA] ¡û
>WENV180022028 FTFL01000062 [FTFL] metagenome; soil 3000 3076 + Asp GTC [ENA] ¢þ
>WENV180285797 OBID01717578 [OBID] metagenome; sludge 51 127 + Asp GTC [ENA] ¢þ
>W141043069 AMFB01000036 Alphaproteobacteria Bradyrhizobium sp. DFCI-1 [AMFB] 101174 101250 + Asp GTC [ENA] ¡û
>W141063666 APJD01000020 Alphaproteobacteria Bradyrhizobium sp. OHSU_III [APJD] 155089 155013 - Asp GTC [ENA] ¡û
>WENV180695461 OCZS013504422 [OCZS] soil metagenome; soil 108 32 - Asp GTC [ENA] ¢þ
>WENV181166981 OEIU01005440 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 3782 3858 + Asp GTC [ENA] ¢þ
>WENV181167272 OEIU01017196 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 2 78 + Asp GTC [ENA] ¢þ
>WENV181167902 OEIU01101784 [OEIU] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 74 150 + Asp GTC [ENA] ¢þ
>WENV181169913 OEIV010014510 [OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex 1067 1143 + Asp GTC [ENA] ¢þ
>WENV181188329 OEOE01087264 [OEOE] activated sludge metagenome; Activated Sludge 218 294 + Asp GTC [ENA] ¢þ
>WENV181222607 OFDC01000025 [OFDC] hot springs metagenome; Water 106318 106242 - Asp GTC [ENA] ¢þ
>WENV181226712 OFDN01000015 [OFDN] hot springs metagenome; Water 204166 204090 - Asp GTC [ENA] ¢þ
>WENV181379284 OFRD01000266 [OFRD] wastewater metagenome; Exp Tend CN 100WW 18384 18460 + Asp GTC [ENA] ¢þ
>WENV181381311 OFRE01059142 [OFRE] wastewater metagenome; Exp Tend NO 50WW 457 533 + Asp GTC [ENA] ¢þ
>WENV181385992 OFRL01000292 [OFRL] wastewater metagenome; Lake Maggiore Cannobio 6112 6036 - Asp GTC [ENA] ¢þ
>WENV181399837 OFSF01000017 [OFSF] wastewater metagenome; Exp Tend VB 100WW 58549 58625 + Asp GTC [ENA] ¢þ
>W141149743 AWZU01000003 Alphaproteobacteria Bradyrhizobium sp. ARR65 [AWZU] 79970 80046 + Asp GTC [ENA] ¡û
>W141150322 AXAH01000008 Alphaproteobacteria Bradyrhizobium elkanii USDA 3254 [AXAH] 185791 185867 + Asp GTC [ENA] ¡û
>W141150362 AXAI01000004 Alphaproteobacteria Bradyrhizobium sp. Tv2a-2 [AXAI] 222736 222660 - Asp GTC [ENA] ¡û
>W141151075 AXAU01000001 Alphaproteobacteria Bradyrhizobium murdochi WSM1741 [AXAU] 368447 368523 + Asp GTC [ENA] ¡û
>W141151190 AXAW01000007 Alphaproteobacteria Bradyrhizobium elkanii USDA 3259 [AXAW] 185789 185865 + Asp GTC [ENA] ¡û
>W141278106 JAFC01000013 Alphaproteobacteria Bradyrhizobium elkanii USDA 94 [JAFC] 28176 28100 - Asp GTC [ENA] ¡û
>W141278401 JAFM01000001 Alphaproteobacteria Hyphomicrobium sp. 802 [JAFM] 3278048 3277972 - Asp GTC [ENA] ¡û
>WENV183724144 PJQE01000364 [PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane 4614 4538 - Asp GTC [ENA] ¢þ
>WENV183725775 PJQF01015265 [PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm 304 380 + Asp GTC [ENA] ¢þ
>WENV183746482 POYD01028887 [POYD] biofilm metagenome; PVC pipe from biofilm reactor 1 77 + Asp GTC [ENA] ¢þ
>WENV170000014 AERA01000858 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 363 287 - Asp GTC [ENA] ¢þ
>WENV170225901 CEQE01189685 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 310 234 - Asp GTC [ENA] ¢þ
>WENV170301029 CESG01235176 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1391 1315 - Asp GTC [ENA] ¢þ
>WENV170450599 CEUZ01127720 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 23152 23076 - Asp GTC [ENA] ¢þ
>WENV170452227 CEUZ01247083 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4174 4098 - Asp GTC [ENA] ¢þ
>WENV170553027 CXWK01005847 [CXWK] wastewater metagenome; activated sludge 44554 44478 - Asp GTC [ENA] ¢þ
>WENV170554457 CXWK01071299 [CXWK] wastewater metagenome; activated sludge 1275 1199 - Asp GTC [ENA] ¢þ
>WENV170577725 FSSH01000631 [FSSH] freshwater metagenome; drinking water 4735 4659 - Asp GTC [ENA] ¢þ
>WENV170648346 JRHI01000188 [JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced 18539 18615 + Asp GTC [ENA] ¢þ
>WENV170649552 JRYC01019889 [JRYC] activated sludge metagenome; activated biomass of a common effluent treatment plant treating industrial wastewater 1122 1046 - Asp GTC [ENA] ¢þ
>WENV170650136 JRYD01014095 [JRYD] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 2 ppm DO 184 108 - Asp GTC [ENA] ¢þ
>WENV170652224 JRYH01000123 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 57052 57128 + Asp GTC [ENA] ¢þ
>WENV170652267 JRYH01000430 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 1223 1147 - Asp GTC [ENA] ¢þ
>WENV170653166 JRYI01009083 [JRYI] activated sludge metagenome; activated biomass in a lab-scale reactor treating industrial wastewater at 1 ppm DO 1284 1208 - Asp GTC [ENA] ¢þ
>WENV170705780 LNAP01000271 [LNAP] soil metagenome; Soil samples (1 kg each in a 20% v/v slurry with milli Q water) were incubated in the dark with 55220 55144 - Asp GTC [ENA] ¢þ
>WENV170709252 LNFM01000216 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 181490 181414 - Asp GTC [ENA] ¢þ
>WENV170711671 LNFM01006432 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 13479 13403 - Asp GTC [ENA] ¢þ
>WENV170711811 LNFM01007550 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 11945 11869 - Asp GTC [ENA] ¢þ
>WENV170713412 LNFM01030539 [LNFM] activated carbon metagenome; dual media filters at the Ann Arbor, Michigan drinking water treatment plant 90 14 - Asp GTC [ENA] ¢þ
>WENV170779474 LZQP01000001 [LZQP] oil field metagenome; sample BH-FW-16 from oil reservoir 389047 389123 + Asp GTC [ENA] ¢þ
>WENV170932703 MDTG01207493 [MDTG] marine metagenome; seawater 1209 1285 + Asp GTC [ENA] ¢þ
>C181113184 CP025113 Alphaproteobacteria Bradyrhizobium sp. SK17 [CP025113] 5661490 5661566 + Asp GTC - ¡û
>W141730480 JNIJ01000025 Alphaproteobacteria Bradyrhizobium sp. URHD0069 [JNIJ] 25010 25086 + Asp GTC [ENA] ¡û
>W09103024 AAIS01000006 Alphaproteobacteria Nitrobacter hamburgensis X14 [AAIS] 154573 154649 + Asp GTC [ENA] ¡û
>W09135215 ACVL01000009 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [ACVL] 61624 61700 + Asp GTC [ENA] ¡û
>W1910182846 BJNF01000050 Alphaproteobacteria Nitrobacter winogradskyi NBRC 14297 [BJNF] 19569 19493 - Asp GTC [ENA] ¡û
>W1910183120 BJNL01000014 Alphaproteobacteria Bradyrhizobium elkanii NBRC 14791 [BJNL] 83061 82985 - Asp GTC [ENA] ¡û
>W1910236458 FPHO01000002 Alphaproteobacteria Hyphomicrobium sp. CS1GBMeth3 [FPHO] 299940 300016 + Asp GTC [ENA] ¡û
>W1910693451 MDEP01000040 Alphaproteobacteria Bradyrhizobium sp. UASWS1016 [MDEP] 131077 131001 - Asp GTC [ENA] ¡û
>W1911245294 NSJY01000016 Alphaproteobacteria Bradyrhizobium sp. UFLA03-84 [NSJY] 6855 6779 - Asp GTC [ENA] ¡û
>W1911409907 NWTG01000008 Alphaproteobacteria Bradyrhizobium sp. C9 [NWTG] 209091 209167 + Asp GTC [ENA] ¡û
>W1810089273 PGEQ01000001 Alphaproteobacteria Bradyrhizobium lablabi GAS165 [PGEQ] 2689926 2690002 + Asp GTC [ENA] ¡û
>W1810367853 PVYZ01000001 Alphaproteobacteria Rhizobium tropici NFR14 [PVYZ] 374209 374133 - Asp GTC [ENA] ¡û
>W1810395539 PYCM01000445 Alphaproteobacteria Bradyrhizobium algeriense RST89 [PYCM] 133 57 - Asp GTC [ENA] ¡û
>W1810395600 PYCN01000003 Alphaproteobacteria Bradyrhizobium algeriense RST91 [PYCN] 214 138 - Asp GTC [ENA] ¡û
>W1810400130 PYFV01000038 Alphaproteobacteria Bradyrhizobium sp. MOS004 [PYFV] 9609 9685 + Asp GTC [ENA] ¡û
>SRA1015213 SRR023845.500631 Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120) 64 140 + Asp GTC [SRA]
>W1510072636 CDHO01000002 Alphaproteobacteria Hyphomicrobium sp. GJ21 [CDHO] 365777 365853 + Asp GTC [ENA] ¡û
>C10107556 CP002083 Alphaproteobacteria Hyphomicrobium denitrificans ATCC 51888 [CP002083] 1994199 1994123 - Asp GTC [Ensembl] ¡û
>WENV11100372 AERA01000858 [AERA] activated sludge metagenome; activated biomass of an industrial wastewater treatment plant 363 287 - Asp GTC [ENA] ¡û
>C11111395 FQ859181 Alphaproteobacteria Hyphomicrobium sp. MC1 [FQ859181] 2776078 2776002 - Asp GTC [Ensembl] ¡û
>W1511508007 JXOF01000187 Alphaproteobacteria Bradyrhizobium elkanii UASWS1015 [JXOF] 181835 181911 + Asp GTC [ENA] ¡û
>W1511533382 JYMT01000042 Alphaproteobacteria Bradyrhizobium sp. LTSP885 [JYMT] 781779 781703 - Asp GTC [ENA] ¡û
>W1511533419 JYMU01000034 Alphaproteobacteria Bradyrhizobium sp. LTSPM299 [JYMU] 37943 37867 - Asp GTC [ENA] ¡û
>W1511576784 LAPV01000043 Alphaproteobacteria Devosia psychrophila Cr7-05 [LAPV] 13611 13687 + Asp GTC [ENA] ¡û
>W1511681441 LFIP01000135 Alphaproteobacteria Bradyrhizobium embrapense SEMIA 6208 [LFIP] 4834 4758 - Asp GTC [ENA] ¡û
>W1511681473 LFIQ01000077 Alphaproteobacteria Bradyrhizobium pachyrhizi PAC 48 [LFIQ] 81313 81237 - Asp GTC [ENA] ¡û
>W1511684046 LFLZ01000073 Alphaproteobacteria Bradyrhizobium tropiciagri SEMIA 6148 [LFLZ] 37191 37267 + Asp GTC [ENA] ¡û
>W1511705983 LGTB01000004 Alphaproteobacteria Bradyrhizobium viridifuturi SEMIA 690 [LGTB] 22960 23036 + Asp GTC [ENA] ¡û
>W11181111 AGIS01000003 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [AGIS] 103903 103827 - Asp GTC [ENA] ¡û
>C161097195 CP016428 Alphaproteobacteria Bradyrhizobium icense LMTR 13 [CP016428] 3966934 3967010 + Asp GTC [Ensembl] ¡û
>W121062472 AJJK01002196 Alphaproteobacteria Bradyrhizobium elkanii 587 [AJJK] 2958 3034 + Asp GTC [ENA] ¡û
>W121065204 AJPV01000251 Alphaproteobacteria Bradyrhizobium elkanii CCBAU 05737 [AJPV] 28546 28622 + Asp GTC [ENA] ¡û
>W121065260 AJPW01000450 Alphaproteobacteria Bradyrhizobium elkanii CCBAU 43297 [AJPW] 4473 4397 - Asp GTC [ENA] ¡û
>W1610049399 BBEX01000380 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 3018 3094 + Asp GTC [ENA] ¡û
>C131015801 CP005587 Alphaproteobacteria Hyphomicrobium denitrificans 1NES1 [CP005587] 1217063 1217139 + Asp GTC [Ensembl] ¡û
>W1610666774 LJYE01000037 Alphaproteobacteria Bradyrhizobium pachyrhizi [LJYE] 39753 39829 + Asp GTC [ENA] ¡û
>W1610717267 LLXX01000033 Alphaproteobacteria Bradyrhizobium valentinum [LLXX] 136552 136628 + Asp GTC [ENA] ¡û
>W1610717331 LLXY01000167 Alphaproteobacteria Bradyrhizobium valentinum [LLXY] 29141 29217 + Asp GTC [ENA] ¡û
>W1610717418 LLXZ01000219 Alphaproteobacteria Bradyrhizobium jicamae [LLXZ] 15919 15995 + Asp GTC [ENA] ¡û
>W1610717442 LLYA01000155 Alphaproteobacteria Bradyrhizobium retamae [LLYA] 49564 49640 + Asp GTC [ENA] ¡û
>W1610717472 LLYB01000040 Alphaproteobacteria Bradyrhizobium lablabi [LLYB] 17996 18072 + Asp GTC [ENA] ¡û
>W1610751788 LNCU01000096 Alphaproteobacteria Bradyrhizobium macuxiense BR 10303 [LNCU] 35143 35219 + Asp GTC [ENA] ¡û
>W1610754006 LNFA01000285 Alphaproteobacteria Rhizobiales bacterium Ga0077549 [LNFA] 13604 13528 - Asp GTC [ENA] ¡û
>W1611061226 MAXB01000012 Alphaproteobacteria Bradyrhizobium paxllaeri [MAXB] 104157 104233 + Asp GTC [ENA] ¡û
>W1611061300 MAXC01000033 Alphaproteobacteria Bradyrhizobium sp. LMTR 3 [MAXC] 318910 318986 + Asp GTC [ENA] ¡û
>W1710045798 BBEX01000380 Alphaproteobacteria Bradyrhizobium sp. 17-4 [BBEX] 3018 3094 + Asp GTC [ENA] ¡û
>W1710513035 FMZW01000001 Alphaproteobacteria Bradyrhizobium brasilense R5 [FMZW] 204014 203938 - Asp GTC [ENA] ¡û
>W1710536605 FNTH01000001 Alphaproteobacteria Bradyrhizobium erythrophlei [FNTH] 1113172 1113096 - Asp GTC [ENA] ¡û
>W1710536658 FNTI01000002 Alphaproteobacteria Bradyrhizobium lablabi [FNTI] 75921 75997 + Asp GTC [ENA] ¡û
>W1710540674 FNWZ01000003 Alphaproteobacteria Tardiphaga sp. OK245 [FNWZ] 845050 844974 - Asp GTC [ENA] ¡û
>W1710558686 FOMB01000035 Alphaproteobacteria Devosia psychrophila [FOMB] 17999 17923 - Asp GTC [ENA] ¡û
>W1710579353 FPCH01000002 Alphaproteobacteria Hyphomicrobium facile [FPCH] 715844 715768 - Asp GTC [ENA] ¡û
>W1710594256 FSRD01000001 Alphaproteobacteria Bradyrhizobium erythrophlei [FSRD] 7173715 7173791 + Asp GTC [ENA] ¡û
>W1710735598 LGHK01000134 Alphaproteobacteria Bradyrhizobium sp. NAS96.2 [LGHK] 11837 11913 + Asp GTC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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