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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146864 (4 seq.)
>W1711581609
MNUI01000030
Unclassified
Candidatus Beckwithbacteria bacterium CG1_02_47_37 [MNUI]
9877
9954
+
Glu
TTC
[ENA]
¡û
>W1910703148
MEZQ01000011
Unclassified
Candidatus Beckwithbacteria bacterium RIFCSPLOWO2_02_FULL_47_23 [MEZQ]
8568
8491
-
Glu
TTC
[ENA]
¡û
>W2010836574
MEZQ01000011
Unclassified
Candidatus Beckwithbacteria bacterium RIFCSPLOWO2_02_FULL_47_23 [MEZQ]
8568
8491
-
Glu
TTC
[ENA]
¡û
>W1511614207
LCLI01000043
Unclassified
Microgenomates group bacterium GW2011_GWC2_45_8 GW2011_GWC2_45_8 [LCLI]
6351
6274
-
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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