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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.146875 (5 seq.)
>W1910734333
MHJS01000001
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_01_FULL_44_13 [MHJS]
18265
18341
+
Asp
GTC
[ENA]
¡û
>W1910734375
MHJT01000003
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_43_9 [MHJT]
5171
5095
-
Asp
GTC
[ENA]
¡û
>W2010867763
MHJS01000001
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_01_FULL_44_13 [MHJS]
18265
18341
+
Asp
GTC
[ENA]
¡û
>W2010867805
MHJT01000003
Unclassified
Candidatus Jacksonbacteria bacterium RIFCSPLOWO2_02_FULL_43_9 [MHJT]
5171
5095
-
Asp
GTC
[ENA]
¡û
>W1511609574
LCFM01000001
Unclassified
Parcubacteria group bacterium GW2011_GWA2_43_13 GW2011_GWA2_43_13 [LCFM]
71935
72011
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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