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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147499 (6 seq.)
>WENV180301026
OBJE01001182
[OBJE] human gut metagenome; faeces
12225
12302
+
Leu
TAG
[ENA]
¡û
>WENV182013584
OHBO01001609
[OHBO] human gut metagenome; feces
4286
4209
-
Leu
TAG
[ENA]
¡û
>WENV182019896
OHBZ01001914
[OHBZ] human gut metagenome; feces
1611
1688
+
Leu
TAG
[ENA]
¡û
>WENV182047727
OHDY01000884
[OHDY] human gut metagenome; feces
103
180
+
Leu
TAG
[ENA]
¡û
>WENV182114694
OHIZ01002081
[OHIZ] human gut metagenome; feces
1732
1809
+
Leu
TAG
[ENA]
¡û
>WENV182157175
OHLW01003656
[OHLW] human gut metagenome; feces
1601
1678
+
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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