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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147565 (274 seq.)
>A171003553
CP004050
Euryarchaeota
Methanobrevibacter sp. AbM4 [CP004050]
412435
412510
+
Tyr
GTA
-
¡û
>A171004003
CP006933
Euryarchaeota
Methanobacterium formicicum BRM9 [CP006933]
2131980
2131906
-
Tyr
GTA
-
¡û
>A171005845
CP010834
Euryarchaeota
Methanobrevibacter sp. YE315 [CP010834]
1891804
1891729
-
Tyr
GTA
-
¡û
>A171006082
CP011266
Euryarchaeota
Methanobrevibacter millerae SM9 [CP011266]
2051135
2051060
-
Tyr
GTA
-
¡û
>A171006560
CP014265
Euryarchaeota
Methanobrevibacter olleyae YLM1 [CP014265]
1547878
1547803
-
Tyr
GTA
-
¡û
>A171007303
HG425166
Euryarchaeota
Methanobacterium sp. MB1 [HG425166]
224333
224407
+
Tyr
GTA
-
¡û
>A171007357
LN515531
Euryarchaeota
Methanobacterium formicicum [LN515531]
1603804
1603878
+
Tyr
GTA
-
¡û
>A171007388
LN734822
Euryarchaeota
Methanobacterium formicicum [LN734822]
260837
260911
+
Tyr
GTA
-
¡û
>WENV180204530
OBAH01000611
[OBAH] human gut metagenome; human gut
11449
11374
-
Tyr
GTA
[ENA]
¢þ
>WENV180206311
OBAI01000153
[OBAI] human gut metagenome; human gut
52627
52702
+
Tyr
GTA
[ENA]
¢þ
>WENV180220913
OBAX01000143
[OBAX] human gut metagenome; human gut
11193
11118
-
Tyr
GTA
[ENA]
¢þ
>WENV180220934
OBAX01000394
[OBAX] human gut metagenome; human gut
6927
6854
-
Tyr
GTA
[ENA]
¢þ
>WENV180221420
OBAZ01000009
[OBAZ] human gut metagenome; human gut
18229
18154
-
Tyr
GTA
[ENA]
¢þ
>WENV180221592
OBBA01000009
[OBBA] human gut metagenome; human gut
298
373
+
Tyr
GTA
[ENA]
¢þ
>WENV180223248
OBBG01000017
[OBBG] human gut metagenome; human gut
11215
11140
-
Tyr
GTA
[ENA]
¢þ
>WENV180223887
OBBI01000099
[OBBI] human gut metagenome; human gut
8939
8864
-
Tyr
GTA
[ENA]
¢þ
>WENV180240455
OBDD01000101
[OBDD] human gut metagenome; human gut
155
230
+
Tyr
GTA
[ENA]
¢þ
>WENV180244875
OBDM01000278
[OBDM] human gut metagenome; human gut
10840
10915
+
Tyr
GTA
[ENA]
¢þ
>WENV180246334
OBDN01135073
[OBDN] human gut metagenome; human gut
143
218
+
Tyr
GTA
[ENA]
¢þ
>WENV180246458
OBDP01000133
[OBDP] human gut metagenome; human gut
325
400
+
Tyr
GTA
[ENA]
¢þ
>WENV180246495
OBDP01000386
[OBDP] human gut metagenome; human gut
6927
6854
-
Tyr
GTA
[ENA]
¢þ
>WENV180274539
OBHE01000014
[OBHE] human gut metagenome; human gut
18173
18098
-
Tyr
GTA
[ENA]
¢þ
>WENV180278465
OBHX01004307
[OBHX] metagenome; feces
358
433
+
Tyr
GTA
[ENA]
¢þ
>WENV180321241
OBKR01000001
[OBKR] human gut metagenome; feces
333685
333610
-
Tyr
GTA
[ENA]
¢þ
>WENV180330405
OBKV01054790
[OBKV] human gut metagenome; human gut
613
688
+
Tyr
GTA
[ENA]
¢þ
>WENV180335728
OBLG01000208
[OBLG] human gut metagenome; human gut
40216
40291
+
Tyr
GTA
[ENA]
¢þ
>WENV180349481
OBLO01048325
[OBLO] metagenome; feces
736
661
-
Tyr
GTA
[ENA]
¢þ
>WENV180469559
OBYM01004899
[OBYM] human gut metagenome; faeces
509
434
-
Tyr
GTA
[ENA]
¢þ
>WENV180526829
OCHI01081894
[OCHI] human gut metagenome; human gut
238
313
+
Tyr
GTA
[ENA]
¢þ
>WENV180529246
OCHJ01172333
[OCHJ] human gut metagenome; human gut
36
111
+
Tyr
GTA
[ENA]
¢þ
>WENV180535680
OCHN01000682
[OCHN] human gut metagenome; human gut
32083
32158
+
Tyr
GTA
[ENA]
¢þ
>WENV180543810
OCIO01002019
[OCIO] human gut metagenome; human gut
178
253
+
Tyr
GTA
[ENA]
¢þ
>WENV180544041
OCIP01000322
[OCIP] human gut metagenome; human gut
97
172
+
Tyr
GTA
[ENA]
¢þ
>WENV180544340
OCIQ01000014
[OCIQ] human gut metagenome; human gut
253
328
+
Tyr
GTA
[ENA]
¢þ
>WENV180545266
OCIT01000195
[OCIT] human gut metagenome; human gut
267
342
+
Tyr
GTA
[ENA]
¢þ
>WENV180545302
OCIT01000634
[OCIT] human gut metagenome; human gut
71
144
+
Tyr
GTA
[ENA]
¢þ
>WENV180545615
OCIU01000008
[OCIU] human gut metagenome; human gut
224089
224014
-
Tyr
GTA
[ENA]
¢þ
>WENV180629019
OCQP01016451
[OCQP] human gut metagenome; human gut
1358
1283
-
Tyr
GTA
[ENA]
¢þ
>WENV180654219
OCVV010292256
[OCVV] gut metagenome; gut
11
84
+
Tyr
GTA
[ENA]
¢þ
>WENV180654222
OCVV010292256
[OCVV] gut metagenome; gut
11
84
+
Tyr
GTA
[ENA]
¢þ
>WENV180656725
OCVV010590465
[OCVV] gut metagenome; gut
1195
1122
-
Tyr
GTA
[ENA]
¢þ
>WENV180656732
OCVV010590465
[OCVV] gut metagenome; gut
1195
1122
-
Tyr
GTA
[ENA]
¢þ
>WENV180656796
OCVV010598069
[OCVV] gut metagenome; gut
197
124
-
Tyr
GTA
[ENA]
¢þ
>WENV180656798
OCVV010598069
[OCVV] gut metagenome; gut
197
124
-
Tyr
GTA
[ENA]
¢þ
>WENV180669961
OCVV011291347
[OCVV] gut metagenome; gut
368
295
-
Tyr
GTA
[ENA]
¢þ
>WENV180669964
OCVV011291347
[OCVV] gut metagenome; gut
368
295
-
Tyr
GTA
[ENA]
¢þ
>WENV180829685
ODKA01320869
[ODKA] human metagenome; G_DNA_Stool
186
111
-
Tyr
GTA
[ENA]
¢þ
>WENV180871502
ODLN01081411
[ODLN] human metagenome; G_DNA_Stool
106
33
-
Tyr
GTA
[ENA]
¢þ
>WENV180962381
ODUN01010318
[ODUN] human metagenome; G_DNA_Stool
3277
3202
-
Tyr
GTA
[ENA]
¢þ
>WENV181089549
OEBA01043989
[OEBA] human metagenome; G_DNA_Stool
77
2
-
Tyr
GTA
[ENA]
¢þ
>WENV181186951
OEMZ01132025
[OEMZ] gut metagenome; human stools
201
126
-
Tyr
GTA
[ENA]
¢þ
>WENV181230175
OFEK01000389
[OFEK] activated sludge metagenome; Anaerobic digester
3228
3302
+
Tyr
GTA
[ENA]
¢þ
>WENV181334854
OFMC01000379
[OFMC] human gut metagenome; human gut
31578
31653
+
Tyr
GTA
[ENA]
¢þ
>WENV181336082
OFMD01000010
[OFMD] human gut metagenome; human gut
167586
167661
+
Tyr
GTA
[ENA]
¢þ
>WENV181345272
OFML01000013
[OFML] human gut metagenome; human gut
189053
189128
+
Tyr
GTA
[ENA]
¢þ
>WENV181346743
OFMM01000053
[OFMM] human gut metagenome; human gut
58484
58559
+
Tyr
GTA
[ENA]
¢þ
>WENV181355960
OFMT01015114
[OFMT] human gut metagenome; human gut
325
250
-
Tyr
GTA
[ENA]
¢þ
>WENV181361833
OFOK01000006
[OFOK] human gut metagenome; human gut
186409
186484
+
Tyr
GTA
[ENA]
¢þ
>WENV181672411
OGON01085063
[OGON] human gut metagenome; faeces
349
424
+
Tyr
GTA
[ENA]
¢þ
>WENV181675251
OGOP01002487
[OGOP] human gut metagenome; faeces
1991
2066
+
Tyr
GTA
[ENA]
¢þ
>WENV181681859
OGOU01001062
[OGOU] human gut metagenome; faeces
3256
3331
+
Tyr
GTA
[ENA]
¢þ
>WENV181690853
OGOZ01000802
[OGOZ] human gut metagenome; faeces
19126
19051
-
Tyr
GTA
[ENA]
¢þ
>WENV181714577
OGPR01003004
[OGPR] human gut metagenome; faeces
9219
9144
-
Tyr
GTA
[ENA]
¢þ
>WENV181737961
OGQI01000817
[OGQI] human gut metagenome; faeces
1581
1656
+
Tyr
GTA
[ENA]
¢þ
>WENV181741087
OGQJ01060992
[OGQJ] human gut metagenome; faeces
156
231
+
Tyr
GTA
[ENA]
¢þ
>WENV181753826
OGQR01002710
[OGQR] human gut metagenome; faeces
1385
1460
+
Tyr
GTA
[ENA]
¢þ
>WENV181779963
OGRI01038924
[OGRI] human gut metagenome; faeces
580
505
-
Tyr
GTA
[ENA]
¢þ
>WENV181798111
OGRU01050754
[OGRU] human gut metagenome; faeces
330
405
+
Tyr
GTA
[ENA]
¢þ
>WENV181872324
OGWZ01002234
[OGWZ] human gut metagenome; faeces
2862
2937
+
Tyr
GTA
[ENA]
¢þ
>WENV181885080
OGXJ01005541
[OGXJ] human gut metagenome; faeces
4534
4459
-
Tyr
GTA
[ENA]
¢þ
>WENV181893144
OGXQ01000368
[OGXQ] human gut metagenome; faeces
10471
10546
+
Tyr
GTA
[ENA]
¢þ
>WENV181905109
OGXX01091345
[OGXX] human gut metagenome; faeces
475
550
+
Tyr
GTA
[ENA]
¢þ
>WENV181909747
OGYC01000639
[OGYC] human gut metagenome; faeces
34016
33941
-
Tyr
GTA
[ENA]
¢þ
>WENV181942368
OGYZ01000079
[OGYZ] human gut metagenome; faeces
44585
44660
+
Tyr
GTA
[ENA]
¢þ
>WENV181954447
OGZK01000003
[OGZK] human gut metagenome; faeces
32142
32067
-
Tyr
GTA
[ENA]
¢þ
>WENV181998578
OHAV01000216
[OHAV] human gut metagenome; feces
420
495
+
Tyr
GTA
[ENA]
¢þ
>WENV182004307
OHBD01036522
[OHBD] human gut metagenome; feces
358
283
-
Tyr
GTA
[ENA]
¢þ
>WENV182004791
OHBE01000535
[OHBE] human gut metagenome; faeces
30619
30694
+
Tyr
GTA
[ENA]
¢þ
>WENV182030763
OHCS01000138
[OHCS] human gut metagenome; feces
35968
36043
+
Tyr
GTA
[ENA]
¢þ
>WENV182055797
OHEM01000226
[OHEM] human gut metagenome; feces
420
495
+
Tyr
GTA
[ENA]
¢þ
>WENV182058500
OHEP01015507
[OHEP] human gut metagenome; feces
501
426
-
Tyr
GTA
[ENA]
¢þ
>WENV182068648
OHFG01001071
[OHFG] human gut metagenome; feces
14302
14227
-
Tyr
GTA
[ENA]
¢þ
>WENV182072167
OHFM01012295
[OHFM] human gut metagenome; feces
1388
1463
+
Tyr
GTA
[ENA]
¢þ
>WENV182074403
OHFP01023645
[OHFP] human gut metagenome; feces
309
384
+
Tyr
GTA
[ENA]
¢þ
>WENV182082024
OHGK01014839
[OHGK] human gut metagenome; feces
238
313
+
Tyr
GTA
[ENA]
¢þ
>WENV182087818
OHGW01038809
[OHGW] human gut metagenome; feces
274
199
-
Tyr
GTA
[ENA]
¢þ
>WENV182089034
OHGZ01001023
[OHGZ] human gut metagenome; feces
12440
12365
-
Tyr
GTA
[ENA]
¢þ
>WENV182102243
OHHU01031716
[OHHU] human gut metagenome; feces
126
201
+
Tyr
GTA
[ENA]
¢þ
>WENV182107680
OHIK01035663
[OHIK] human gut metagenome; feces
305
230
-
Tyr
GTA
[ENA]
¢þ
>WENV182114405
OHIY01026481
[OHIY] human gut metagenome; feces
377
450
+
Tyr
GTA
[ENA]
¢þ
>WENV182127307
OHJU01013109
[OHJU] human gut metagenome; feces
411
336
-
Tyr
GTA
[ENA]
¢þ
>WENV182179581
OHNN01001449
[OHNN] human gut metagenome; feces
9139
9064
-
Tyr
GTA
[ENA]
¢þ
>WENV182180325
OHNO01000470
[OHNO] human gut metagenome; feces
10831
10906
+
Tyr
GTA
[ENA]
¢þ
>WENV182185024
OHOA01028724
[OHOA] human gut metagenome; feces
340
415
+
Tyr
GTA
[ENA]
¢þ
>WENV182192613
OHOZ01024955
[OHOZ] human gut metagenome; feces
629
554
-
Tyr
GTA
[ENA]
¢þ
>WENV182202349
OHPO01005422
[OHPO] human gut metagenome; feces
2904
2979
+
Tyr
GTA
[ENA]
¢þ
>WENV182204499
OHPR01000223
[OHPR] human gut metagenome; feces
420
495
+
Tyr
GTA
[ENA]
¢þ
>WENV182212507
OHQG01001046
[OHQG] human gut metagenome; feces
9238
9163
-
Tyr
GTA
[ENA]
¢þ
>WENV182215410
OHQM01000036
[OHQM] human gut metagenome; feces
76080
76155
+
Tyr
GTA
[ENA]
¢þ
>WENV182219612
OHQR01003845
[OHQR] human gut metagenome; feces
1161
1236
+
Tyr
GTA
[ENA]
¢þ
>WENV182235452
OHRT01000187
[OHRT] human gut metagenome; feces
420
495
+
Tyr
GTA
[ENA]
¢þ
>WENV182245146
OHSJ01037582
[OHSJ] human gut metagenome; feces
578
653
+
Tyr
GTA
[ENA]
¢þ
>WENV182257630
OHTF01060904
[OHTF] human gut metagenome; feces
353
428
+
Tyr
GTA
[ENA]
¢þ
>WENV182280809
OHUY01014591
[OHUY] human gut metagenome; feces
600
525
-
Tyr
GTA
[ENA]
¢þ
>WENV182281882
OHVB01048309
[OHVB] human gut metagenome; feces
303
228
-
Tyr
GTA
[ENA]
¢þ
>WENV182287657
OHVS01018599
[OHVS] human gut metagenome; feces
195
270
+
Tyr
GTA
[ENA]
¢þ
>WENV182289248
OHVU01033656
[OHVU] human gut metagenome; feces
220
145
-
Tyr
GTA
[ENA]
¢þ
>WENV182290262
OHVX01008956
[OHVX] human gut metagenome; feces
825
750
-
Tyr
GTA
[ENA]
¢þ
>WENV182303984
OHWY01021339
[OHWY] human gut metagenome; feces
515
590
+
Tyr
GTA
[ENA]
¢þ
>WENV182360746
OICB01018469
[OICB] human gut metagenome; feces
24
97
+
Tyr
GTA
[ENA]
¢þ
>WENV182393048
OIEH01002801
[OIEH] human gut metagenome; human gut
3845
3920
+
Tyr
GTA
[ENA]
¢þ
>WENV182396666
OIEM01000380
[OIEM] human gut metagenome; human gut
263
188
-
Tyr
GTA
[ENA]
¢þ
>WENV182397987
OIEN01000219
[OIEN] human gut metagenome; human gut
9058
8983
-
Tyr
GTA
[ENA]
¢þ
>WENV182523925
OIWS01093391
[OIWS] human gut metagenome; faeces
117
42
-
Tyr
GTA
[ENA]
¢þ
>WENV182538012
OIXH01030651
[OIXH] human gut metagenome; faeces
1735
1810
+
Tyr
GTA
[ENA]
¢þ
>WENV182634655
OJKY01016788
[OJKY] metagenome; faeces
685
610
-
Tyr
GTA
[ENA]
¢þ
>WENV182639550
OJLA01086901
[OJLA] metagenome; faeces
320
395
+
Tyr
GTA
[ENA]
¢þ
>WENV182650499
OJMH01000030
[OJMH] human gut metagenome; feces
13225
13150
-
Tyr
GTA
[ENA]
¢þ
>WENV182653201
OJMI01000015
[OJMI] human gut metagenome; feces
194008
194083
+
Tyr
GTA
[ENA]
¢þ
>WENV182662562
OJMO01000001
[OJMO] human gut metagenome; feces
289867
289942
+
Tyr
GTA
[ENA]
¢þ
>WENV182678711
OJNS01027239
[OJNS] human gut metagenome; human gut
327
402
+
Tyr
GTA
[ENA]
¢þ
>WENV182681898
OJNV01027951
[OJNV] human gut metagenome; human gut
317
392
+
Tyr
GTA
[ENA]
¢þ
>WENV182872847
OKRV01031475
[OKRV] human gut metagenome; faeces
677
602
-
Tyr
GTA
[ENA]
¢þ
>WENV182873517
OKRW01000590
[OKRW] human gut metagenome; faeces
420
495
+
Tyr
GTA
[ENA]
¢þ
>WENV182879963
OKRZ01053572
[OKRZ] human gut metagenome; faeces
732
657
-
Tyr
GTA
[ENA]
¢þ
>WENV182884044
OKSC01000004
[OKSC] human gut metagenome; faeces
264801
264876
+
Tyr
GTA
[ENA]
¢þ
>WENV182899745
OKST01000921
[OKST] human gut metagenome; feces
14356
14281
-
Tyr
GTA
[ENA]
¢þ
>WENV182928972
OKUO01042931
[OKUO] human gut metagenome; feces
243
318
+
Tyr
GTA
[ENA]
¢þ
>WENV182942753
OKVH01004518
[OKVH] human gut metagenome; human gut
3220
3145
-
Tyr
GTA
[ENA]
¢þ
>WENV182945335
OKVK01000027
[OKVK] human gut metagenome; human gut
98049
98124
+
Tyr
GTA
[ENA]
¢þ
>WENV182949422
OKVP01046841
[OKVP] human gut metagenome; human gut
419
344
-
Tyr
GTA
[ENA]
¢þ
>WENV183036644
OLGA01002201
[OLGA] human gut metagenome; faeces
5041
5116
+
Tyr
GTA
[ENA]
¢þ
>WENV183071923
OLIT01000016
[OLIT] human gut metagenome; feces
191927
192002
+
Tyr
GTA
[ENA]
¢þ
>WENV183076193
OLIW01001963
[OLIW] human gut metagenome; feces
3728
3803
+
Tyr
GTA
[ENA]
¢þ
>WENV183078021
OLIX01000289
[OLIX] human gut metagenome; feces
22040
22115
+
Tyr
GTA
[ENA]
¢þ
>WENV183082035
OLJA01044490
[OLJA] human gut metagenome; human gut
187
262
+
Tyr
GTA
[ENA]
¢þ
>WENV183108351
OLNN01000078
[OLNN] human gut metagenome; faeces
76182
76257
+
Tyr
GTA
[ENA]
¢þ
>WENV183121681
OLNV01001890
[OLNV] human gut metagenome; faeces
11501
11426
-
Tyr
GTA
[ENA]
¢þ
>WENV183123544
OLNW01001196
[OLNW] human gut metagenome; faeces
11
86
+
Tyr
GTA
[ENA]
¢þ
>WENV183125929
OLNY01003097
[OLNY] human gut metagenome; faeces
9053
8978
-
Tyr
GTA
[ENA]
¢þ
>WENV183127162
OLNZ01000011
[OLNZ] human gut metagenome; faeces
76182
76257
+
Tyr
GTA
[ENA]
¢þ
>WENV183132224
OLOB01000876
[OLOB] human gut metagenome; faeces
1687
1762
+
Tyr
GTA
[ENA]
¢þ
>WENV183133302
OLOB01066456
[OLOB] human gut metagenome; faeces
488
415
-
Tyr
GTA
[ENA]
¢þ
>WENV183138002
OLOH01000364
[OLOH] human gut metagenome; faeces
23522
23597
+
Tyr
GTA
[ENA]
¢þ
>WENV183143699
OLOL01000047
[OLOL] human gut metagenome; faeces
39270
39195
-
Tyr
GTA
[ENA]
¢þ
>WENV183145599
OLOM01000460
[OLOM] human gut metagenome; faeces
10797
10872
+
Tyr
GTA
[ENA]
¢þ
>WENV183155812
OLOS01001257
[OLOS] human gut metagenome; faeces
10554
10629
+
Tyr
GTA
[ENA]
¢þ
>WENV183158275
OLOT01031569
[OLOT] human gut metagenome; faeces
911
986
+
Tyr
GTA
[ENA]
¢þ
>WENV183160222
OLOV01000004
[OLOV] human gut metagenome; faeces
129965
130040
+
Tyr
GTA
[ENA]
¢þ
>WENV183165010
OLOX01001920
[OLOX] human gut metagenome; faeces
9939
10014
+
Tyr
GTA
[ENA]
¢þ
>WENV183169083
OLPA01001034
[OLPA] human gut metagenome; faeces
10260
10335
+
Tyr
GTA
[ENA]
¢þ
>WENV183172092
OLPC01003421
[OLPC] human gut metagenome; faeces
1275
1350
+
Tyr
GTA
[ENA]
¢þ
>WENV183175209
OLPF01000083
[OLPF] human gut metagenome; faeces
51731
51656
-
Tyr
GTA
[ENA]
¢þ
>WENV183180448
OLPI01000248
[OLPI] human gut metagenome; faeces
22610
22685
+
Tyr
GTA
[ENA]
¢þ
>WENV183186898
OLPO01003320
[OLPO] human gut metagenome; faeces
3167
3242
+
Tyr
GTA
[ENA]
¢þ
>WENV183190064
OLPR01000005
[OLPR] human gut metagenome; faeces
224759
224684
-
Tyr
GTA
[ENA]
¢þ
>WENV183195998
OLPU01000058
[OLPU] human gut metagenome; faeces
65111
65186
+
Tyr
GTA
[ENA]
¢þ
>WENV183198472
OLPV01001962
[OLPV] human gut metagenome; faeces
5230
5305
+
Tyr
GTA
[ENA]
¢þ
>WENV183204645
OLPZ01000329
[OLPZ] human gut metagenome; faeces
7078
7153
+
Tyr
GTA
[ENA]
¢þ
>WENV183208670
OLQB01003372
[OLQB] human gut metagenome; faeces
9196
9121
-
Tyr
GTA
[ENA]
¢þ
>WENV183222791
OLQM01003096
[OLQM] human gut metagenome; faeces
80
5
-
Tyr
GTA
[ENA]
¢þ
>WENV183231434
OLQU01000065
[OLQU] human gut metagenome; faeces
82251
82326
+
Tyr
GTA
[ENA]
¢þ
>WENV183251638
OLRI01000015
[OLRI] human gut metagenome; faeces
29012
28937
-
Tyr
GTA
[ENA]
¢þ
>WENV183258148
OLRN01000821
[OLRN] human gut metagenome; faeces
10708
10783
+
Tyr
GTA
[ENA]
¢þ
>WENV183260089
OLRO01095157
[OLRO] human gut metagenome; faeces
202
277
+
Tyr
GTA
[ENA]
¢þ
>WENV183269141
OLRV01000024
[OLRV] human gut metagenome; faeces
113214
113289
+
Tyr
GTA
[ENA]
¢þ
>WENV183277721
OLSA01002478
[OLSA] human gut metagenome; faeces
4622
4697
+
Tyr
GTA
[ENA]
¢þ
>WENV183279039
OLSB01000008
[OLSB] human gut metagenome; faeces
32249
32174
-
Tyr
GTA
[ENA]
¢þ
>WENV183282939
OLSD01000022
[OLSD] human gut metagenome; faeces
55035
54960
-
Tyr
GTA
[ENA]
¢þ
>WENV183285504
OLSE01000460
[OLSE] human gut metagenome; faeces
11595
11520
-
Tyr
GTA
[ENA]
¢þ
>WENV183293068
OLSK01000009
[OLSK] human gut metagenome; faeces
192027
192102
+
Tyr
GTA
[ENA]
¢þ
>WENV183295300
OLSL01000665
[OLSL] human gut metagenome; faeces
5059
5134
+
Tyr
GTA
[ENA]
¢þ
>WENV183296699
OLSM01000102
[OLSM] human gut metagenome; faeces
11291
11216
-
Tyr
GTA
[ENA]
¢þ
>WENV183298227
OLSN01000002
[OLSN] human gut metagenome; faeces
35359
35284
-
Tyr
GTA
[ENA]
¢þ
>WENV183305787
OLSX01004160
[OLSX] human gut metagenome; faeces
1619
1694
+
Tyr
GTA
[ENA]
¢þ
>WENV183312030
OLVO01037777
[OLVO] human gut metagenome; faeces
843
768
-
Tyr
GTA
[ENA]
¢þ
>WENV183316379
OLVS01030288
[OLVS] human gut metagenome; feces
316
241
-
Tyr
GTA
[ENA]
¢þ
>WENV183322777
OLVX01005883
[OLVX] human gut metagenome; faeces
1997
2072
+
Tyr
GTA
[ENA]
¢þ
>WENV183325076
OLVZ01000107
[OLVZ] human gut metagenome; faeces
11589
11514
-
Tyr
GTA
[ENA]
¢þ
>WENV183329057
OLWB01000001
[OLWB] human gut metagenome; faeces
32265
32190
-
Tyr
GTA
[ENA]
¢þ
>WENV183340829
OLWL01053443
[OLWL] human gut metagenome; feces
575
502
-
Tyr
GTA
[ENA]
¢þ
>WENV183342011
OLWN01001006
[OLWN] human gut metagenome; feces
8954
8879
-
Tyr
GTA
[ENA]
¢þ
>WENV183343169
OLWO01008497
[OLWO] human gut metagenome; feces
1773
1848
+
Tyr
GTA
[ENA]
¢þ
>WENV183344139
OLWP01023587
[OLWP] human gut metagenome; feces
737
662
-
Tyr
GTA
[ENA]
¢þ
>WENV183354061
OLXB01008563
[OLXB] human gut metagenome; feces
1267
1342
+
Tyr
GTA
[ENA]
¢þ
>WENV183362459
OLXK01008355
[OLXK] human gut metagenome; feces
882
807
-
Tyr
GTA
[ENA]
¢þ
>WENV183368560
OLXR01018778
[OLXR] human gut metagenome; feces
378
303
-
Tyr
GTA
[ENA]
¢þ
>WENV183369469
OLXS01040268
[OLXS] human gut metagenome; feces
342
417
+
Tyr
GTA
[ENA]
¢þ
>WENV183374051
OLXY01024221
[OLXY] human gut metagenome; feces
25
100
+
Tyr
GTA
[ENA]
¢þ
>WENV183381661
OLYJ01028179
[OLYJ] human gut metagenome; feces
434
509
+
Tyr
GTA
[ENA]
¢þ
>WENV183382836
OLYL01021282
[OLYL] human gut metagenome; feces
790
715
-
Tyr
GTA
[ENA]
¢þ
>WENV183385124
OLYN01034842
[OLYN] human gut metagenome; feces
486
561
+
Tyr
GTA
[ENA]
¢þ
>WENV183407699
OMAC01002882
[OMAC] human gut metagenome; feces
724
649
-
Tyr
GTA
[ENA]
¢þ
>WENV183409506
OMAG01000827
[OMAG] human gut metagenome; feces
8968
8893
-
Tyr
GTA
[ENA]
¢þ
>WENV183424183
OMBG01030173
[OMBG] human gut metagenome; feces
447
522
+
Tyr
GTA
[ENA]
¢þ
>WENV183425593
OMBK01031753
[OMBK] human gut metagenome; feces
458
533
+
Tyr
GTA
[ENA]
¢þ
>WENV183428273
OMBN01015226
[OMBN] human gut metagenome; feces
737
662
-
Tyr
GTA
[ENA]
¢þ
>WENV183429135
OMBO01003193
[OMBO] human gut metagenome; feces
724
649
-
Tyr
GTA
[ENA]
¢þ
>WENV183439019
OMCF01021282
[OMCF] human gut metagenome; feces
790
715
-
Tyr
GTA
[ENA]
¢þ
>WENV183447729
OMCS01027586
[OMCS] human gut metagenome; feces
640
565
-
Tyr
GTA
[ENA]
¢þ
>WENV183458319
OMDM01006385
[OMDM] human gut metagenome; feces
2264
2339
+
Tyr
GTA
[ENA]
¢þ
>WENV183473375
OMER01005492
[OMER] human gut metagenome; feces
759
684
-
Tyr
GTA
[ENA]
¢þ
>WENV183486782
OMFR01009247
[OMFR] human gut metagenome; feces
288
213
-
Tyr
GTA
[ENA]
¢þ
>WENV183517735
OMNP01010053
[OMNP] human gut metagenome; feces
746
671
-
Tyr
GTA
[ENA]
¢þ
>WENV183518957
OMNT01000025
[OMNT] human gut metagenome; faeces
11489
11414
-
Tyr
GTA
[ENA]
¢þ
>WENV183654841
OQWD01001157
[OQWD] human gut metagenome; human gut
9058
8983
-
Tyr
GTA
[ENA]
¢þ
>WENV183766513
PPYE01356923
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
39993
40068
+
Tyr
GTA
[ENA]
¢þ
>WENV183775366
PPYF01065607
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1955
2030
+
Tyr
GTA
[ENA]
¢þ
>WENV183786698
PPYF01306028
[PPYF] human gut metagenome; stool from patient with Crohn's disease
11197
11122
-
Tyr
GTA
[ENA]
¢þ
>WENV170021188
BBPF01003774
[BBPF] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
2693
2767
+
Tyr
GTA
[ENA]
¢þ
>WENV170057315
CDZG01033635
[CDZG] gut metagenome; human stools
279
354
+
Tyr
GTA
[ENA]
¢þ
>WENV170059037
CDZH01031484
[CDZH] gut metagenome; human stools
6774
6849
+
Tyr
GTA
[ENA]
¢þ
>WENV170104143
CEAZ01022477
[CEAZ] gut metagenome; human stools
470
395
-
Tyr
GTA
[ENA]
¢þ
>At0908
CP000678
Euryarchaeota
Methanobrevibacter smithii ATCC 35061 ATCC 35061; PS; DSMZ 861 [CP000678]
878607
878534
-
Tyr
GTA
[Ensembl]
¡û
>At1589
CP000102
Euryarchaeota
Methanosphaera stadtmanae DSM 3091 [CP000102]
1550602
1550529
-
Tyr
GTA
[Ensembl]
¡û
>WENV170651576
JRYF01094348
[JRYF] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
813
738
-
Tyr
GTA
[ENA]
¢þ
>WENV170669959
LAHS01010711
[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
361
288
-
Tyr
GTA
[ENA]
¢þ
>WENV170670881
LAHU01003268
[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
6648
6573
-
Tyr
GTA
[ENA]
¢þ
>WENV170677302
LDZT01004896
[LDZT] terrestrial metagenome; oil reservoir sample SB1
14493
14419
-
Tyr
GTA
[ENA]
¢þ
>WENV170972471
MTKX01031377
[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
873
799
-
Tyr
GTA
[ENA]
¢þ
>WENV170978687
MTKZ01058273
[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
1462
1388
-
Tyr
GTA
[ENA]
¢þ
>W1910186510
CCXV01000086
Euryarchaeota
Methanobrevibacter smithii ACE6 [CCXV]
750
675
-
Tyr
GTA
[ENA]
¡û
>W1910226612
FMXB01000003
Euryarchaeota
Methanobrevibacter millerae DSM 16643 [FMXB]
180399
180474
+
Tyr
GTA
[ENA]
¡û
>W1910229673
FOAK01000011
Euryarchaeota
Methanobrevibacter gottschalkii DSM 11978 [FOAK]
38832
38759
-
Tyr
GTA
[ENA]
¡û
>W1910230528
FOTL01000002
Euryarchaeota
Methanobrevibacter olleyae DSM 16632 [FOTL]
91280
91205
-
Tyr
GTA
[ENA]
¡û
>W1910569096
JHWX01000002
Euryarchaeota
Methanobrevibacter wolinii SH [JHWX]
107327
107402
+
Tyr
GTA
[ENA]
¡û
>W1910576008
JRWK01000002
Euryarchaeota
Methanosphaera sp. WGK6 [JRWK]
8686
8759
+
Tyr
GTA
[ENA]
¡û
>W1910583637
JXMW01000028
Euryarchaeota
Methanobrevibacter arboriphilus JCM 13429 = DSM 1125 DH1 [JXMW]
39615
39688
+
Tyr
GTA
[ENA]
¡û
>W1910655418
LZPL01000021
Euryarchaeota
Methanobrevibacter sp. A27 [LZPL]
3646
3719
+
Tyr
GTA
[ENA]
¡û
>W1910656094
MAIE01000045
Euryarchaeota
Methanobrevibacter sp. A54 [MAIE]
19785
19710
-
Tyr
GTA
[ENA]
¡û
>W1910656135
MAIF01000129
Euryarchaeota
Methanosphaera sp. A6 [MAIF]
640
567
-
Tyr
GTA
[ENA]
¡û
>W1910793142
MRCT01000001
Euryarchaeota
Methanobrevibacter sp. 87.7 [MRCT]
16510
16585
+
Tyr
GTA
[ENA]
¡û
>W1910832137
MZGS01000023
Euryarchaeota
Methanobrevibacter thaueri DSM 11995 [MZGS]
160323
160248
-
Tyr
GTA
[ENA]
¡û
>W1910832174
MZGU01000004
Euryarchaeota
Methanobrevibacter woesei DSM 11979 [MZGU]
260256
260331
+
Tyr
GTA
[ENA]
¡û
>W1910899164
NGJK01000083
Euryarchaeota
Methanosphaera stadtmanae PA5 [NGJK]
649
576
-
Tyr
GTA
[ENA]
¡û
>W1910938907
NIZT01000060
Euryarchaeota
Candidatus Methanobinarius endosymbioticus NOE [NIZT]
1033
958
-
Tyr
GTA
[ENA]
¡û
>W1911177147
NQLD01000006
Euryarchaeota
Methanobrevibacter smithii WWM1085 [NQLD]
66093
66018
-
Tyr
GTA
[ENA]
¡û
>W1911533089
OKQL01000093
Euryarchaeota
Methanobrevibacter oralis M2 CSUR P5920 [OKQL]
111542
111467
-
Tyr
GTA
[ENA]
¡û
>ENV09002642
ADGC01010726
Wallaby gut metagenome MeugComb_C1
136
209
+
Tyr
GTA
[ENA]
¡û
>W1610000928
ABYV02000006
Euryarchaeota
Methanobrevibacter smithii DSM 2374 [ABYV]
538478
538553
+
Tyr
GTA
[ENA]
¡û
>W1610000966
ABYW01000007
Euryarchaeota
Methanobrevibacter smithii DSM 2375 [ABYW]
30621
30546
-
Tyr
GTA
[ENA]
¡û
>W1610002310
AEKU01000020
Euryarchaeota
Methanobrevibacter smithii TS145A [AEKU]
32762
32687
-
Tyr
GTA
[ENA]
¡û
>W1610002346
AELL01000027
Euryarchaeota
Methanobrevibacter smithii TS145B [AELL]
32789
32714
-
Tyr
GTA
[ENA]
¡û
>W1610002378
AELM01000021
Euryarchaeota
Methanobrevibacter smithii TS146A [AELM]
32645
32570
-
Tyr
GTA
[ENA]
¡û
>W1610002415
AELN01000017
Euryarchaeota
Methanobrevibacter smithii TS146B [AELN]
61139
61064
-
Tyr
GTA
[ENA]
¡û
>W1610002441
AELO01000031
Euryarchaeota
Methanobrevibacter smithii TS146C [AELO]
11419
11344
-
Tyr
GTA
[ENA]
¡û
>W1610002483
AELP01000011
Euryarchaeota
Methanobrevibacter smithii TS146D [AELP]
32744
32669
-
Tyr
GTA
[ENA]
¡û
>W1610002511
AELQ01000024
Euryarchaeota
Methanobrevibacter smithii TS146E [AELQ]
11594
11519
-
Tyr
GTA
[ENA]
¡û
>W1610002546
AELR01000019
Euryarchaeota
Methanobrevibacter smithii TS147A [AELR]
11594
11519
-
Tyr
GTA
[ENA]
¡û
>W1610002590
AELS01000017
Euryarchaeota
Methanobrevibacter smithii TS147B [AELS]
12243
12168
-
Tyr
GTA
[ENA]
¡û
>W1610002608
AELT01000013
Euryarchaeota
Methanobrevibacter smithii TS147C [AELT]
12867
12792
-
Tyr
GTA
[ENA]
¡û
>W1610002639
AELU01000014
Euryarchaeota
Methanobrevibacter smithii TS94A [AELU]
208024
207949
-
Tyr
GTA
[ENA]
¡û
>W1610002676
AELV01000021
Euryarchaeota
Methanobrevibacter smithii TS94B [AELV]
18487
18412
-
Tyr
GTA
[ENA]
¡û
>W1610002709
AELW01000015
Euryarchaeota
Methanobrevibacter smithii TS94C [AELW]
12385
12310
-
Tyr
GTA
[ENA]
¡û
>W1610002742
AELX01000020
Euryarchaeota
Methanobrevibacter smithii TS95A [AELX]
14523
14448
-
Tyr
GTA
[ENA]
¡û
>W1610002773
AELY01000018
Euryarchaeota
Methanobrevibacter smithii TS95B [AELY]
36438
36363
-
Tyr
GTA
[ENA]
¡û
>W1610002806
AELZ01000016
Euryarchaeota
Methanobrevibacter smithii TS95C [AELZ]
20431
20356
-
Tyr
GTA
[ENA]
¡û
>W1610002839
AEMA01000022
Euryarchaeota
Methanobrevibacter smithii TS95D [AEMA]
13550
13475
-
Tyr
GTA
[ENA]
¡û
>W1610002871
AEMB01000014
Euryarchaeota
Methanobrevibacter smithii TS96A [AEMB]
14301
14226
-
Tyr
GTA
[ENA]
¡û
>W1610002901
AEMC01000013
Euryarchaeota
Methanobrevibacter smithii TS96B [AEMC]
14298
14223
-
Tyr
GTA
[ENA]
¡û
>W1610002934
AEMD01000038
Euryarchaeota
Methanobrevibacter smithii TS96C [AEMD]
11347
11272
-
Tyr
GTA
[ENA]
¡û
>W1610006249
AMGN01000088
Euryarchaeota
Methanobacterium sp. Maddingley MBC34 [AMGN]
367
293
-
Tyr
GTA
[ENA]
¡û
>W1610011009
AMPO01000003
Euryarchaeota
Methanobacterium formicicum DSM 3637 [AMPO]
59006
59080
+
Tyr
GTA
[ENA]
¡û
>W1610040632
BAGX02000025
Euryarchaeota
Methanobrevibacter boviskoreani JH1 [BAGX]
17276
17351
+
Tyr
GTA
[ENA]
¡û
>W1610045143
BBBD01000133
Euryarchaeota
Methanobrevibacter arboriphilus JCM 9315 [BBBD]
4915
4988
+
Tyr
GTA
[ENA]
¡û
>W1610049138
BBES01000002
Euryarchaeota
Methanobacterium formicicum JCM 10132 [BBES]
207559
207633
+
Tyr
GTA
[ENA]
¡û
>W1610049175
BBET01000004
Euryarchaeota
Methanobrevibacter arboriphilus JCM 13429 = DSM 1125 [BBET]
3029
3102
+
Tyr
GTA
[ENA]
¡û
>W1610083225
CBVX010000002
Euryarchaeota
Methanobrevibacter arboriphilus ANOR1 [CBVX]
43763
43836
+
Tyr
GTA
[ENA]
¡û
>W1610083279
CBWS010000002
Euryarchaeota
Methanobrevibacter oralis JMR01 [CBWS]
127965
127890
-
Tyr
GTA
[ENA]
¡û
>W1610613856
LGGL01000003
Euryarchaeota
Methanobacterium sp. 42_16 [LGGL]
14493
14419
-
Tyr
GTA
[ENA]
¡û
>W1610990668
LWMT01000066
Euryarchaeota
Methanobrevibacter filiformis DSM 11501 [LWMT]
18294
18220
-
Tyr
GTA
[ENA]
¡û
>W1610990697
LWMU01000048
Euryarchaeota
Methanobrevibacter oralis DSM 7256 [LWMU]
111839
111764
-
Tyr
GTA
[ENA]
¡û
>W1610990778
LWMW01000126
Euryarchaeota
Methanobrevibacter cuticularis DSM 11139 [LWMW]
58193
58120
-
Tyr
GTA
[ENA]
¡û
>WENV078809
AAQL01000509
Gut microbiome of Human (healthy human stool sample 8)
859
781
-
Tyr
GTA
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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