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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.147741 (4 seq.)
>W1930014977
MFWM01000006
Unclassified
Candidatus Pacearchaeota archaeon RBG_13_33_26 [MFWM]
84014
84090
+
Met
CAT
[ENA]
¡û
>W1930014993
MFWP01000007
Unclassified
Candidatus Pacearchaeota archaeon RBG_19FT_COMBO_34_9 [MFWP]
24395
24319
-
Met
CAT
[ENA]
¡û
>W2030021055
MFWM01000006
Unclassified
Candidatus Pacearchaeota archaeon RBG_13_33_26 [MFWM]
84014
84090
+
fMet
CAT
[ENA]
¡û
>W2030021071
MFWP01000007
Unclassified
Candidatus Pacearchaeota archaeon RBG_19FT_COMBO_34_9 [MFWP]
24395
24319
-
fMet
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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