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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148268 (4 seq.)
>W1711136399
LVAD01000046
Fibrobacterota
Fibrobacterales bacterium Fibro_01 [LVAD]
161074
161000
-
Val
CAC
[ENA]
¡û
>W1610636649
LIUM01000046
Fibrobacterota
Fibrobacteria bacterium AD312 [LIUM]
161074
161000
-
Val
CAC
[ENA]
¡û
>W1610947519
LVAD01000046
Fibrobacterota
Fibrobacterales bacterium Fibro_01 [LVAD]
161074
161000
-
Val
CAC
[ENA]
¡û
>W1710771422
LIUM01000046
Fibrobacterota
Fibrobacteria bacterium AD312 [LIUM]
161074
161000
-
Val
CAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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