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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148467 (7 seq.)
>W1711508459
MKYN01000001
Actinomycetota
Corynebacterium diphtheriae [MKYN]
280917
280992
+
Lys
TTT
[ENA]
¡û
>C181230130
LT990688
Actinomycetota
Corynebacterium diphtheriae subsp. lausannense CHUV2995 [LT990688]
865748
865823
+
Lys
TTT
-
¡û
>C191214739
LR134538
Actinomycetota
Corynebacterium diphtheriae NCTC3529 [LR134538]
2492600
2492675
+
Lys
TTT
-
¡û
>W2010359259
CADDGT010000019
Actinomycetota
Corynebacterium diphtheriae [CADDGT]
6114
6189
+
Lys
TTT
[ENA]
¡û
>W2110373031
JADQUG010000024
Actinomycetota
Corynebacterium belfantii 04-17 [JADQUG]
29695
29620
-
Lys
TTT
[ENA]
¡û
>C231046111
CP040521
Actinomycetota
Corynebacterium diphtheriae CD1036 [CP040521]
746593
746668
+
Lys
TTT
-
¡û
>W121061057
AJGI01000017
Actinomycetota
Corynebacterium diphtheriae bv. mitis str. NC03529 [AJGI]
38965
38890
-
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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