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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.148814 (6 seq.)
>C191107159
CP033530
Gammaproteobacteria
Acinetobacter pittii 2014S07-126 [CP033530]
564243
564320
+
Ala
TGC
-
¡û
>C191107187
CP033530
Gammaproteobacteria
Acinetobacter pittii 2014S07-126 [CP033530]
3693135
3693058
-
Ala
TGC
-
¡û
>C191107221
CP033535
Gammaproteobacteria
Acinetobacter pittii 2012N21-164 [CP033535]
20038
20115
+
Ala
TGC
-
¡û
>W1810592958
QFXY01000001
Gammaproteobacteria
Acinetobacter pittii 2014S07-126 [QFXY]
564243
564320
+
Ala
TGC
[ENA]
¡û
>W1810592986
QFXY01000001
Gammaproteobacteria
Acinetobacter pittii 2014S07-126 [QFXY]
3693135
3693058
-
Ala
TGC
[ENA]
¡û
>W1810593020
QFXZ01000001
Gammaproteobacteria
Acinetobacter pittii 2012N21-164 [QFXZ]
20038
20115
+
Ala
TGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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