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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.149315 (4 seq.)
>WENV181374279
OFQY01003540
[OFQY] wastewater metagenome; Exp Tend VB 10WW
3332
3255
-
Pro
TGG
[ENA]
¡û
>WENV181382574
OFRG01001964
[OFRG] wastewater metagenome; WWTP Verbania (Effluent)
5191
5114
-
Pro
TGG
[ENA]
¡û
>WENV181387943
OFRM01002910
[OFRM] wastewater metagenome; Exp Tend VB 0WW
4541
4464
-
Pro
TGG
[ENA]
¡û
>WENV181399578
OFSE01045461
[OFSE] wastewater metagenome; Exp Tend VB 50WW
239
162
-
Pro
TGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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