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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.149516 (243 seq.)
>W1710914129
LNTC01000006
Campylobacterota
Aliarcobacter cryaerophilus [LNTC]
17092
17016
-
Met
CAT
[ENA]
¡û
>W1710979355
LPNY01000132
Campylobacterota
Arcobacter sp. EP1 [LPNY]
126785
126709
-
Met
CAT
[ENA]
¡û
>W1711055360
LRUS01000082
Campylobacterota
Aliarcobacter cryaerophilus [LRUS]
59485
59561
+
Met
CAT
[ENA]
¡û
>W1711136365
LVAC01000026
Campylobacterota
Campylobacterales bacterium Epsilon_01 [LVAC]
10600
10676
+
Met
CAT
[ENA]
¡û
>W1711326836
MBGA01000025
Campylobacterota
Campylobacter pinnipediorum subsp. caledonicus [MBGA]
134281
134205
-
Met
CAT
[ENA]
¡û
>W1711350427
MCRK01000034
Campylobacterota
Campylobacter pinnipediorum subsp. pinnipediorum [MCRK]
171842
171918
+
Met
CAT
[ENA]
¡û
>W1711350459
MCRL01000016
Campylobacterota
Campylobacter pinnipediorum subsp. pinnipediorum [MCRL]
179142
179218
+
Met
CAT
[ENA]
¡û
>W1711351824
MDCT01000001
Campylobacterota
Campylobacter pinnipediorum RM18812 [MDCT]
121419
121343
-
Met
CAT
[ENA]
¡û
>W1711351899
MDCU01000040
Campylobacterota
Campylobacter pinnipediorum RM18813 [MDCU]
6387
6463
+
Met
CAT
[ENA]
¡û
>W1711351906
MDCV01000001
Campylobacterota
Campylobacter pinnipediorum RM18906 [MDCV]
379193
379269
+
Met
CAT
[ENA]
¡û
>W1711484250
MKCO01000001
Campylobacterota
Poseidonibacter lekithochrous LFT 1.7 [MKCO]
475671
475747
+
Met
CAT
[ENA]
¡û
>W1711484286
MKCO01000015
Campylobacterota
Poseidonibacter lekithochrous LFT 1.7 [MKCO]
187
263
+
Met
CAT
[ENA]
¡û
>W1711484300
MKCO01000037
Campylobacterota
Poseidonibacter lekithochrous LFT 1.7 [MKCO]
90
166
+
Met
CAT
[ENA]
¡û
>W1711484305
MKCO01000037
Campylobacterota
Poseidonibacter lekithochrous LFT 1.7 [MKCO]
617
693
+
Met
CAT
[ENA]
¡û
>C026905
BX571656
Campylobacterota
Wolinella succinogenes [BX571656]
1040595
1040671
+
Met
CAT
[Ensembl]
¡û
>C171017237
CP012546
Campylobacterota
Campylobacter pinnipediorum subsp. pinnipediorum RM17260 [CP012546]
931131
931207
+
Met
CAT
-
¡û
>C171017281
CP012547
Campylobacterota
Campylobacter pinnipediorum subsp. pinnipediorum RM17261 [CP012547]
867036
867112
+
Met
CAT
-
¡û
>C171017325
CP012548
Campylobacterota
Campylobacter pinnipediorum subsp. pinnipediorum RM17262 [CP012548]
870675
870751
+
Met
CAT
-
¡û
>C171055143
CP017018
Campylobacterota
Campylobacter pinnipediorum subsp. caledonicus M302/10/6 [CP017018]
930552
930628
+
Met
CAT
-
¡û
>C171088974
CP019070
Campylobacterota
Poseidonibacter parvus LPB0137 [CP019070]
2013394
2013318
-
Met
CAT
-
¡û
>C171088986
CP019070
Campylobacterota
Poseidonibacter parvus LPB0137 [CP019070]
1464211
1464135
-
Met
CAT
-
¡û
>WENV180043796
LQAI01020734
[LQAI] bioreactor metagenome; bioreactor_5 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
78
154
+
Met
CAT
[ENA]
¢þ
>WENV180044175
LQAJ01015925
[LQAJ] bioreactor metagenome; bioreactor_6 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
210
134
-
Met
CAT
[ENA]
¢þ
>WENV180242555
OBDI01291503
[OBDI] metagenome; diffuse fluid
127
51
-
Met
CAT
[ENA]
¢þ
>WENV180284224
OBID01021629
[OBID] metagenome; sludge
92
168
+
Met
CAT
[ENA]
¢þ
>WENV180288301
OBIL01114839
[OBIL] metagenome; hydrothermal vent
175
99
-
Met
CAT
[ENA]
¢þ
>WENV180316858
OBKJ01000265
[OBKJ] metagenome; hydrothermal vent
5059
5135
+
Met
CAT
[ENA]
¢þ
>WENV180440827
OBWV01002712
[OBWV] human gut metagenome; faeces
524
600
+
Met
CAT
[ENA]
¢þ
>WENV180444398
OBWZ01005093
[OBWZ] human gut metagenome; faeces
1041
1117
+
Met
CAT
[ENA]
¢þ
>WENV180582263
OCMO01032591
[OCMO] metagenome; diffuse fluid
152
76
-
Met
CAT
[ENA]
¢þ
>WENV180583594
OCNB01133888
[OCNB] metagenome; diffuse fluid
115
39
-
Met
CAT
[ENA]
¢þ
>WENV180583608
OCNB01137726
[OCNB] metagenome; diffuse fluid
58
134
+
Met
CAT
[ENA]
¢þ
>WENV180698111
ODDE01038279
[ODDE] human metagenome; G_DNA_Supragingival plaque
389
465
+
Met
CAT
[ENA]
¢þ
>WENV180698618
ODDH01038886
[ODDH] human metagenome; G_DNA_Buccal mucosa
232
156
-
Met
CAT
[ENA]
¢þ
>WENV180721985
ODGL01044134
[ODGL] human metagenome; G_DNA_Subgingival plaque
355
279
-
Met
CAT
[ENA]
¢þ
>WENV180728900
ODGU01118621
[ODGU] human metagenome; G_DNA_Supragingival plaque
91
15
-
Met
CAT
[ENA]
¢þ
>WENV180732278
ODGY01000064
[ODGY] human metagenome; G_DNA_Supragingival plaque
2682
2758
+
Met
CAT
[ENA]
¢þ
>WENV180734028
ODGZ01002031
[ODGZ] human metagenome; G_DNA_Supragingival plaque
8103
8179
+
Met
CAT
[ENA]
¢þ
>WENV180751469
ODHS01056589
[ODHS] human metagenome; G_DNA_Supragingival plaque
97
21
-
Met
CAT
[ENA]
¢þ
>WENV180764735
ODIB01000625
[ODIB] human metagenome; G_DNA_Supragingival plaque
3598
3674
+
Met
CAT
[ENA]
¢þ
>WENV180769035
ODIG01028382
[ODIG] human metagenome; G_DNA_Tongue dorsum
404
480
+
Met
CAT
[ENA]
¢þ
>WENV180788230
ODIS01040486
[ODIS] human metagenome; G_DNA_Supragingival plaque
28
104
+
Met
CAT
[ENA]
¢þ
>WENV180797328
ODJB01047156
[ODJB] human metagenome; G_DNA_Supragingival plaque
79
3
-
Met
CAT
[ENA]
¢þ
>WENV180805016
ODJG01039745
[ODJG] human metagenome; G_DNA_Supragingival plaque
73
-1
-
Met
CAT
[ENA]
¢þ
>WENV180809281
ODJK01009873
[ODJK] human metagenome; G_DNA_Subgingival plaque
734
658
-
Met
CAT
[ENA]
¢þ
>WENV180813926
ODJO01003876
[ODJO] human metagenome; G_DNA_Supragingival plaque
3804
3880
+
Met
CAT
[ENA]
¢þ
>WENV180836017
ODKE01030475
[ODKE] human metagenome; G_DNA_Supragingival plaque
930
1006
+
Met
CAT
[ENA]
¢þ
>WENV180843257
ODKN01001302
[ODKN] human metagenome; G_DNA_Supragingival plaque
7261
7337
+
Met
CAT
[ENA]
¢þ
>WENV180846194
ODKT01006851
[ODKT] human metagenome; G_DNA_Supragingival plaque
2558
2634
+
Met
CAT
[ENA]
¢þ
>WENV180855182
ODKX01043219
[ODKX] human metagenome; G_DNA_Tongue dorsum
151
227
+
Met
CAT
[ENA]
¢þ
>WENV180859789
ODLD01004637
[ODLD] human metagenome; G_DNA_Supragingival plaque
324
400
+
Met
CAT
[ENA]
¢þ
>WENV180881653
ODMA01022680
[ODMA] human metagenome; G_DNA_Supragingival plaque
148
72
-
Met
CAT
[ENA]
¢þ
>WENV180882562
ODMC01000140
[ODMC] human metagenome; G_DNA_Tongue dorsum
33370
33446
+
Met
CAT
[ENA]
¢þ
>WENV180889206
ODMN01018155
[ODMN] human metagenome; G_DNA_Supragingival plaque
77
1
-
Met
CAT
[ENA]
¢þ
>WENV180897348
ODNI01017256
[ODNI] human metagenome; G_DNA_Tongue dorsum
129
53
-
Met
CAT
[ENA]
¢þ
>WENV180921695
ODTJ01000256
[ODTJ] human metagenome; G_DNA_Supragingival plaque
52789
52713
-
Met
CAT
[ENA]
¢þ
>WENV180925171
ODTK01049725
[ODTK] human metagenome; G_DNA_Supragingival plaque
191
115
-
Met
CAT
[ENA]
¢þ
>WENV180935159
ODTS01079346
[ODTS] human metagenome; G_DNA_Subgingival plaque
183
107
-
Met
CAT
[ENA]
¢þ
>WENV180939960
ODTX01151046
[ODTX] human metagenome; G_DNA_Supragingival plaque
271
195
-
Met
CAT
[ENA]
¢þ
>WENV180948169
ODUG01000364
[ODUG] human metagenome; G_DNA_Tongue dorsum
27283
27207
-
Met
CAT
[ENA]
¢þ
>WENV180951164
ODUH01010552
[ODUH] human metagenome; G_DNA_Subgingival plaque
3
79
+
Met
CAT
[ENA]
¢þ
>WENV180965009
ODUO01084879
[ODUO] human metagenome; G_DNA_Supragingival plaque
181
105
-
Met
CAT
[ENA]
¢þ
>WENV180975820
ODUY01023338
[ODUY] human metagenome; G_DNA_Supragingival plaque
866
942
+
Met
CAT
[ENA]
¢þ
>WENV180981160
ODVE01008450
[ODVE] human metagenome; G_DNA_Supragingival plaque
1144
1068
-
Met
CAT
[ENA]
¢þ
>WENV180982788
ODVF01000743
[ODVF] human metagenome; G_DNA_Supragingival plaque
17820
17744
-
Met
CAT
[ENA]
¢þ
>WENV180986089
ODVJ01042642
[ODVJ] human metagenome; G_DNA_Tongue dorsum
116
40
-
Met
CAT
[ENA]
¢þ
>WENV180987599
ODVK01050522
[ODVK] human metagenome; G_DNA_Supragingival plaque
410
334
-
Met
CAT
[ENA]
¢þ
>WENV180998420
ODVT01000334
[ODVT] human metagenome; G_DNA_Buccal mucosa
22180
22256
+
Met
CAT
[ENA]
¢þ
>WENV181009626
ODWE01122408
[ODWE] human metagenome; G_DNA_Supragingival plaque
153
229
+
Met
CAT
[ENA]
¢þ
>WENV181019563
ODWU01006179
[ODWU] human metagenome; G_DNA_Supragingival plaque
3481
3557
+
Met
CAT
[ENA]
¢þ
>WENV181030140
ODXF01045728
[ODXF] human metagenome; G_DNA_Supragingival plaque
219
295
+
Met
CAT
[ENA]
¢þ
>WENV181041521
ODXS01015836
[ODXS] human metagenome; G_DNA_Tongue dorsum
1506
1430
-
Met
CAT
[ENA]
¢þ
>WENV181050775
ODYD01057557
[ODYD] human metagenome; G_DNA_Supragingival plaque
649
725
+
Met
CAT
[ENA]
¢þ
>WENV181057705
ODYL01000784
[ODYL] human metagenome; G_DNA_Tongue dorsum
152
76
-
Met
CAT
[ENA]
¢þ
>WENV181067019
ODZI01004875
[ODZI] human metagenome; G_DNA_Supragingival plaque
518
442
-
Met
CAT
[ENA]
¢þ
>WENV181076511
OEAP01006396
[OEAP] human metagenome; G_DNA_Supragingival plaque
4893
4817
-
Met
CAT
[ENA]
¢þ
>WENV181077089
OEAP01024902
[OEAP] human metagenome; G_DNA_Supragingival plaque
717
641
-
Met
CAT
[ENA]
¢þ
>WENV181081983
OEAS01526286
[OEAS] human metagenome; G_DNA_Supragingival plaque
67
143
+
Met
CAT
[ENA]
¢þ
>WENV181084290
OEAV01129447
[OEAV] human metagenome; G_DNA_Supragingival plaque
167
243
+
Met
CAT
[ENA]
¢þ
>WENV181090773
OEBC01003456
[OEBC] human metagenome; G_DNA_Supragingival plaque
2179
2103
-
Met
CAT
[ENA]
¢þ
>WENV181094204
OEBY01000018
[OEBY] human metagenome; G_DNA_Tongue dorsum
125501
125425
-
Met
CAT
[ENA]
¢þ
>WENV181107990
OEEI01048199
[OEEI] human metagenome; G_DNA_Supragingival plaque
606
530
-
Met
CAT
[ENA]
¢þ
>WENV181136585
OEGI01015285
[OEGI] human metagenome; G_DNA_Supragingival plaque
679
755
+
Met
CAT
[ENA]
¢þ
>WENV181137555
OEGJ01006638
[OEGJ] human metagenome; G_DNA_Supragingival plaque
2655
2731
+
Met
CAT
[ENA]
¢þ
>WENV181140142
OEGN01065341
[OEGN] human metagenome; G_DNA_Tongue dorsum
279
203
-
Met
CAT
[ENA]
¢þ
>WENV181143863
OEHM01017801
[OEHM] human metagenome; G_DNA_Supragingival plaque
600
524
-
Met
CAT
[ENA]
¢þ
>WENV181147066
OEHQ01108456
[OEHQ] human metagenome; G_DNA_Supragingival plaque
208
132
-
Met
CAT
[ENA]
¢þ
>WENV181151435
OEHW01052181
[OEHW] human metagenome; G_DNA_Tongue dorsum
87
163
+
Met
CAT
[ENA]
¢þ
>WENV181159290
OEIH01141097
[OEIH] human metagenome; G_DNA_Supragingival plaque
93
17
-
Met
CAT
[ENA]
¢þ
>WENV181160702
OEIK01025766
[OEIK] human metagenome; G_DNA_Supragingival plaque
768
844
+
Met
CAT
[ENA]
¢þ
>WENV181178229
OEJS01109562
[OEJS] human metagenome; G_DNA_Supragingival plaque
179
103
-
Met
CAT
[ENA]
¢þ
>WENV181180125
OEJT01087220
[OEJT] human metagenome; G_DNA_Supragingival plaque
367
291
-
Met
CAT
[ENA]
¢þ
>WENV181181257
OEJU01014840
[OEJU] human metagenome; G_DNA_Supragingival plaque
1146
1222
+
Met
CAT
[ENA]
¢þ
>WENV181206170
OFAT01000069
[OFAT] metagenome; hydrothermal vent
8842
8766
-
Met
CAT
[ENA]
¢þ
>WENV181206580
OFAW01000243
[OFAW] metagenome; hydrothermal vent
7462
7386
-
Met
CAT
[ENA]
¢þ
>WENV181207036
OFAY01000081
[OFAY] metagenome; hydrothermal vent
8842
8766
-
Met
CAT
[ENA]
¢þ
>WENV181207405
OFAZ01000077
[OFAZ] metagenome; hydrothermal vent
9322
9246
-
Met
CAT
[ENA]
¢þ
>WENV181207917
OFBA01002917
[OFBA] metagenome; hydrothermal vent
1666
1742
+
Met
CAT
[ENA]
¢þ
>WENV181208153
OFBB01000112
[OFBB] metagenome; hydrothermal vent
5059
5135
+
Met
CAT
[ENA]
¢þ
>WENV181208573
OFBC01000079
[OFBC] metagenome; hydrothermal vent
5059
5135
+
Met
CAT
[ENA]
¢þ
>WENV181210667
OFBH01021808
[OFBH] metagenome; hydrothermal vent
149
73
-
Met
CAT
[ENA]
¢þ
>WENV181215747
OFCA01011988
[OFCA] metagenome; hydrothermal vent
36
112
+
Met
CAT
[ENA]
¢þ
>WENV181216267
OFCB01014028
[OFCB] metagenome; hydrothermal vent
775
699
-
Met
CAT
[ENA]
¢þ
>WENV181216539
OFCC01002405
[OFCC] metagenome; hydrothermal vent
55
131
+
Met
CAT
[ENA]
¢þ
>WENV181223741
OFDD01000082
[OFDD] metagenome; hydrothermal vent
5059
5135
+
Met
CAT
[ENA]
¢þ
>WENV181224138
OFDE01000077
[OFDE] metagenome; hydrothermal vent
7460
7384
-
Met
CAT
[ENA]
¢þ
>WENV181224364
OFDF01000048
[OFDF] metagenome; hydrothermal vent
5629
5705
+
Met
CAT
[ENA]
¢þ
>WENV181224679
OFDG01001037
[OFDG] metagenome; hydrothermal vent
80
4
-
Met
CAT
[ENA]
¢þ
>WENV181225312
OFDI01000092
[OFDI] metagenome; hydrothermal vent
5059
5135
+
Met
CAT
[ENA]
¢þ
>WENV181233406
OFES01074140
[OFES] coral metagenome; NA
705
781
+
Met
CAT
[ENA]
¢þ
>WENV181732511
OGQD01045663
[OGQD] human gut metagenome; faeces
472
548
+
Met
CAT
[ENA]
¢þ
>WENV182555517
OJDB01001309
[OJDB] seawater metagenome; Sea water
881
805
-
Met
CAT
[ENA]
¢þ
>W141274758
JABW01000022
Campylobacterota
Aliarcobacter cibarius LMG 21996 [JABW]
46537
46461
-
Met
CAT
[ENA]
¡û
>W141289888
JARS01000026
Campylobacterota
Aliarcobacter faecis AF1078 [JARS]
18508
18432
-
Met
CAT
[ENA]
¡û
>W141289940
JART01000023
Campylobacterota
Arcobacter sp. AF1028 [JART]
18508
18432
-
Met
CAT
[ENA]
¡û
>W141289985
JARU01000015
Campylobacterota
Aliarcobacter lanthieri AF1440 [JARU]
32201
32277
+
Met
CAT
[ENA]
¡û
>W141290044
JARV01000012
Campylobacterota
Aliarcobacter lanthieri AF1581 [JARV]
59515
59591
+
Met
CAT
[ENA]
¡û
>W141291670
JATO01000018
Campylobacterota
Aliarcobacter lanthieri AF1430 [JATO]
30923
30999
+
Met
CAT
[ENA]
¡û
>WENV183705445
PDWI01001580
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
29367
29443
+
Met
CAT
[ENA]
¢þ
>WENV183714432
PDWI01183610
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
21
97
+
Met
CAT
[ENA]
¢þ
>WENV183715227
PDWI01228410
[PDWI] oral metagenome; swab sample of gingival sulcus (mouth) from 29 year old lactating female Dolphin_Z
282
358
+
Met
CAT
[ENA]
¢þ
>WENV170012645
ASRM01015706
[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
318
242
-
Met
CAT
[ENA]
¢þ
>WENV170012728
ASRN01005716
[ASRN] bioreactor metagenome; day 82 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
70
146
+
Met
CAT
[ENA]
¢þ
>WENV170012732
ASRN01006182
[ASRN] bioreactor metagenome; day 82 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
226
150
-
Met
CAT
[ENA]
¢þ
>WENV170012916
ASRP01026500
[ASRP] bioreactor metagenome; day 140 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
188
112
-
Met
CAT
[ENA]
¢þ
>WENV170013005
ASRQ01004319
[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
80
156
+
Met
CAT
[ENA]
¢þ
>WENV170014508
AYRG01005260
[AYRG] bioreactor metagenome; day 33 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
188
112
-
Met
CAT
[ENA]
¢þ
>WENV170112372
CEGE01004021
[CEGE] microbial mat metagenome; grass silage
338
414
+
Met
CAT
[ENA]
¢þ
>WENV170573039
FLOH01004406
[FLOH] marine metagenome; water
368
292
-
Met
CAT
[ENA]
¢þ
>WENV170635244
JDSF01000383
[JDSF] bioreactor metagenome; continuous culture bioreactor denitrification-DNRA
5818
5894
+
Met
CAT
[ENA]
¢þ
>WENV170635575
JDSG01000121
[JDSG] bioreactor metagenome; continuous culture bioreactor short generation time transfer1; day 52 after inoculation
20286
20362
+
Met
CAT
[ENA]
¢þ
>WENV170646391
JQGR01000804
[JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine
2497
2421
-
Met
CAT
[ENA]
¢þ
>WENV170646421
JQGR01003097
[JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine
532
456
-
Met
CAT
[ENA]
¢þ
>WENV170646425
JQGR01003681
[JQGR] bioreactor metagenome; continuous culture inoculated with microbial biomass from the upper 2 cm of a marine
267
343
+
Met
CAT
[ENA]
¢þ
>WENV170658624
JTFP01164019
[JTFP] activated sludge metagenome; sludge from laboratory unaugmented bioreactor treating industrial wastewater
1025
1101
+
Met
CAT
[ENA]
¢þ
>WENV170704296
LLEJ01002099
[LLEJ] bioreactor metagenome; day101 10degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
1407
1331
-
Met
CAT
[ENA]
¢þ
>WENV170704385
LLEK01000004
[LLEK] bioreactor metagenome; day79 25degC chemostat 2011 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
57213
57137
-
Met
CAT
[ENA]
¢þ
>WENV170704936
LLEN01018682
[LLEN] bioreactor metagenome; day86 10degC chemostat 2012 inoculated with Wadden Sea sediment taken from the upper 2 cm of the
36
112
+
Met
CAT
[ENA]
¢þ
>WENV170779313
LZQN01000359
[LZQN] oil field metagenome; sample BH-FW-7 from oil reservoir
904
980
+
Met
CAT
[ENA]
¢þ
>WENV170780520
MAAB01004074
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
1783
1859
+
Met
CAT
[ENA]
¢þ
>WENV170780775
MAAB01021012
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
230
154
-
Met
CAT
[ENA]
¢þ
>WENV170781358
MAAB01032619
[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
692
768
+
Met
CAT
[ENA]
¢þ
>WENV170781783
MAAC01000414
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
3979
3903
-
Met
CAT
[ENA]
¢þ
>WENV170782977
MAAC01012363
[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
1042
966
-
Met
CAT
[ENA]
¢þ
>WENV170943370
MDTG01395859
[MDTG] marine metagenome; seawater
20709
20633
-
Met
CAT
[ENA]
¢þ
>C181038847
CP019682
Campylobacterota
Campylobacter sputorum aubsp. sputorum RM3237 [CP019682]
1457543
1457619
+
Met
CAT
-
¡û
>C181038892
CP019683
Campylobacterota
Campylobacter sputorum bv. faecalis CCUG 20703 [CP019683]
1513770
1513846
+
Met
CAT
-
¡û
>C181038937
CP019684
Campylobacterota
Campylobacter sputorum bv. paraureolyticus LMG 11764 LMG 17589 [CP019684]
1482895
1482971
+
Met
CAT
-
¡û
>C181038981
CP019685
Campylobacterota
Campylobacter sputorum RM8705 [CP019685]
1430848
1430924
+
Met
CAT
-
¡û
>C181196953
CP031217
Campylobacterota
Halarcobacter bivalviorum LMG 26154 [CP031217]
1317875
1317799
-
Met
CAT
-
¡û
>C181196997
CP031218
Campylobacterota
Malaciobacter halophilus CCUG 53805 [CP031218]
1977125
1977049
-
Met
CAT
-
¡û
>C181197008
CP031218
Campylobacterota
Malaciobacter halophilus CCUG 53805 [CP031218]
1360014
1359938
-
Met
CAT
-
¡û
>C181197061
CP031219
Campylobacterota
Malaciobacter mytili LMG 24559 [CP031219]
2056730
2056654
-
Met
CAT
-
¡û
>C181197071
CP031219
Campylobacterota
Malaciobacter mytili LMG 24559 [CP031219]
1426390
1426314
-
Met
CAT
-
¡û
>C181199805
CP031367
Campylobacterota
Aliarcobacter trophiarum LMG 25534 [CP031367]
1480369
1480445
+
Met
CAT
-
¡û
>C181213859
LS483446
Campylobacterota
Helicobacter mustelae NCTC12198 [LS483446]
288351
288427
+
Met
CAT
-
¡û
>C191084424
CP032097
Campylobacterota
Arcobacter ellisii LMG 26155 [CP032097]
1465413
1465489
+
Met
CAT
-
¡û
>C191084474
CP032098
Campylobacterota
Malaciobacter molluscorum LMG 25693 CECT 7696 [CP032098]
180779
180855
+
Met
CAT
-
¡û
>C191084505
CP032098
Campylobacterota
Malaciobacter molluscorum LMG 25693 CECT 7696 [CP032098]
1427983
1427907
-
Met
CAT
-
¡û
>C191084579
CP032100
Campylobacterota
Arcobacter suis CECT 7833 [CP032100]
1365995
1366071
+
Met
CAT
-
¡û
>C191084638
CP032101
Campylobacterota
Malaciobacter marinus JCM 15502 [CP032101]
198296
198372
+
Met
CAT
-
¡û
>C191084673
CP032101
Campylobacterota
Malaciobacter marinus JCM 15502 [CP032101]
1363048
1362972
-
Met
CAT
-
¡û
>C191095042
CP032823
Campylobacterota
Aliarcobacter cryaerophilus ATCC 43158 [CP032823]
1528943
1529019
+
Met
CAT
-
¡û
>C191095088
CP032825
Campylobacterota
Aliarcobacter cryaerophilus D2610 [CP032825]
1571496
1571572
+
Met
CAT
-
¡û
>C191147197
CP035928
Campylobacterota
Malaciobacter pacificus LMG 26638 [CP035928]
1794633
1794557
-
Met
CAT
-
¡û
>C191147206
CP035928
Campylobacterota
Malaciobacter pacificus LMG 26638 [CP035928]
1404264
1404188
-
Met
CAT
-
¡û
>C191186422
CP041070
Campylobacterota
Halarcobacter anaerophilus DSM 24636 [CP041070]
1554752
1554676
-
Met
CAT
-
¡û
>C191209094
LR134366
Campylobacterota
Wolinella succinogenes NCTC11488 [LR134366]
2069869
2069945
+
Met
CAT
-
¡û
>W1911200220
NREO01000009
Campylobacterota
Arcobacter suis CECT7833 [NREO]
129798
129722
-
Met
CAT
[ENA]
¡û
>W1911413077
NWVW01000017
Campylobacterota
Malaciobacter canalis F138-33 [NWVW]
6431
6507
+
Met
CAT
[ENA]
¡û
>W1911413089
NWVW01000023
Campylobacterota
Malaciobacter canalis F138-33 [NWVW]
3101
3025
-
Met
CAT
[ENA]
¡û
>W1911413115
NWVX01000017
Campylobacterota
Malaciobacter marinus F140-37 [NWVX]
47988
48064
+
Met
CAT
[ENA]
¡û
>W1911413136
NWVX01000035
Campylobacterota
Malaciobacter marinus F140-37 [NWVX]
25898
25974
+
Met
CAT
[ENA]
¡û
>W1911419361
NXAO01000011
Campylobacterota
Malaciobacter marinus CECT 7727 [NXAO]
25908
25832
-
Met
CAT
[ENA]
¡û
>W1911419376
NXAO01000017
Campylobacterota
Malaciobacter marinus CECT 7727 [NXAO]
3035
2959
-
Met
CAT
[ENA]
¡û
>W1911424173
NXFY01000008
Campylobacterota
Malaciobacter molluscorum CECT 7696 F98-3 [NXFY]
54485
54561
+
Met
CAT
[ENA]
¡û
>W1911424199
NXFY01000030
Campylobacterota
Malaciobacter molluscorum CECT 7696 F98-3 [NXFY]
3058
2982
-
Met
CAT
[ENA]
¡û
>W1911424387
NXGD01000007
Campylobacterota
Aliarcobacter cryaerophilus LMG 10229 [NXGD]
57890
57814
-
Met
CAT
[ENA]
¡û
>W1911424410
NXGE01000001
Campylobacterota
Aliarcobacter cryaerophilus LMG 10210 [NXGE]
255699
255775
+
Met
CAT
[ENA]
¡û
>W1911424543
NXGH01000002
Campylobacterota
Aliarcobacter cryaerophilus LMG 9871 [NXGH]
44181
44105
-
Met
CAT
[ENA]
¡û
>W1911424584
NXGI01000004
Campylobacterota
Aliarcobacter cryaerophilus LMG 9065 [NXGI]
36799
36875
+
Met
CAT
[ENA]
¡û
>W1911424626
NXGJ01000001
Campylobacterota
Aliarcobacter cryaerophilus LMG 9861 [NXGJ]
410017
409941
-
Met
CAT
[ENA]
¡û
>W1911424655
NXGK01000002
Campylobacterota
Aliarcobacter cryaerophilus LMG 24291 [NXGK]
57759
57835
+
Met
CAT
[ENA]
¡û
>W1911426173
NXID01000004
Campylobacterota
Malaciobacter mytili LMG 24559 CECT 7386 [NXID]
5339
5263
-
Met
CAT
[ENA]
¡û
>W1911426213
NXID01000069
Campylobacterota
Malaciobacter mytili LMG 24559 CECT 7386 [NXID]
3133
3057
-
Met
CAT
[ENA]
¡û
>W1911426219
NXIE01000001
Campylobacterota
Halarcobacter mediterraneus F156-34 [NXIE]
462138
462214
+
Met
CAT
[ENA]
¡û
>W1911426287
NXIF01000036
Campylobacterota
Malaciobacter halophilus DSM 18005 [NXIF]
45694
45618
-
Met
CAT
[ENA]
¡û
>W1911426300
NXIF01000048
Campylobacterota
Malaciobacter halophilus DSM 18005 [NXIF]
3056
2980
-
Met
CAT
[ENA]
¡û
>W1911426332
NXIG01000008
Campylobacterota
Arcobacter ellisii CECT 7837 [NXIG]
106434
106358
-
Met
CAT
[ENA]
¡û
>W1911426367
NXIH01000002
Campylobacterota
Arcobacter defluvii CECT 7697 [NXIH]
249680
249604
-
Met
CAT
[ENA]
¡û
>W1911576066
PDJS01000007
Campylobacterota
Aliarcobacter trophiarum CECT 7650 [PDJS]
18794
18870
+
Met
CAT
[ENA]
¡û
>W1911576158
PDJU01000009
Campylobacterota
Arcobacter sp. F155 [PDJU]
3119
3195
+
Met
CAT
[ENA]
¡û
>W1911576181
PDJV01000002
Campylobacterota
Arcobacter sp. F2176 [PDJV]
256645
256569
-
Met
CAT
[ENA]
¡û
>W1911576258
PDJW01000060
Campylobacterota
Malaciobacter mytili T234 [PDJW]
3153
3077
-
Met
CAT
[ENA]
¡û
>W1911576263
PDJW01000068
Campylobacterota
Malaciobacter mytili T234 [PDJW]
5177
5101
-
Met
CAT
[ENA]
¡û
>W1911576301
PDJX01000010
Campylobacterota
Malaciobacter molluscorum F91 [PDJX]
54494
54570
+
Met
CAT
[ENA]
¡û
>W1911576322
PDJX01000025
Campylobacterota
Malaciobacter molluscorum F91 [PDJX]
19603
19679
+
Met
CAT
[ENA]
¡û
>W1911576348
PDJY01000031
Campylobacterota
Malaciobacter halophilus F166-45 [PDJY]
10467
10391
-
Met
CAT
[ENA]
¡û
>W1911576373
PDJY01000037
Campylobacterota
Malaciobacter halophilus F166-45 [PDJY]
25755
25831
+
Met
CAT
[ENA]
¡û
>W1911576443
PDKB01000003
Campylobacterota
Aliarcobacter vitoriensis CECT 9230 [PDKB]
122732
122656
-
Met
CAT
[ENA]
¡û
>W1911576484
PDKC01000004
Campylobacterota
Arcobacter sp. CECT 8985 [PDKC]
63340
63264
-
Met
CAT
[ENA]
¡û
>W1911576517
PDKC01000045
Campylobacterota
Arcobacter sp. CECT 8985 [PDKC]
12289
12365
+
Met
CAT
[ENA]
¡û
>W1911576545
PDKD01000006
Campylobacterota
Aliarcobacter trophiarum LMG 25534 [PDKD]
67477
67401
-
Met
CAT
[ENA]
¡û
>W1911576593
PDKE01000011
Campylobacterota
Arcobacter sp. CECT 8989 [PDKE]
117744
117668
-
Met
CAT
[ENA]
¡û
>W1911576645
PDKF01000024
Campylobacterota
Arcobacter sp. CECT 8983 [PDKF]
4967
5043
+
Met
CAT
[ENA]
¡û
>W1911576673
PDKG01000007
Campylobacterota
Arcobacter sp. CECT 8986 [PDKG]
66698
66774
+
Met
CAT
[ENA]
¡û
>W1911576688
PDKG01000016
Campylobacterota
Arcobacter sp. CECT 8986 [PDKG]
19587
19663
+
Met
CAT
[ENA]
¡û
>W1911576766
PDKI01000009
Campylobacterota
Arcobacter sp. CECT 9188 [PDKI]
39836
39760
-
Met
CAT
[ENA]
¡û
>W1911576777
PDKJ01000001
Campylobacterota
Halarcobacter ebronensis CECT 8993 [PDKJ]
277326
277402
+
Met
CAT
[ENA]
¡û
>W1911576835
PDKK01000010
Campylobacterota
Halarcobacter ebronensis CECT 8441 [PDKK]
13027
13103
+
Met
CAT
[ENA]
¡û
>W1911576868
PDKL01000004
Campylobacterota
Halarcobacter bivalviorum F118-4 [PDKL]
235635
235559
-
Met
CAT
[ENA]
¡û
>W1911576907
PDKM01000001
Campylobacterota
Halarcobacter bivalviorum CECT 7835 [PDKM]
668289
668213
-
Met
CAT
[ENA]
¡û
>W1911576954
PDKN01000002
Campylobacterota
Candidatus Marinarcus aquaticus CECT 8987 [PDKN]
162464
162388
-
Met
CAT
[ENA]
¡û
>W1911577004
PDKO01000003
Campylobacterota
Halarcobacter anaerophilus DSM 24636 [PDKO]
153216
153140
-
Met
CAT
[ENA]
¡û
>W1810046798
NXLX01000004
Campylobacterota
Helicobacter anseris MIT 04-9362 [NXLX]
24227
24151
-
Met
CAT
[ENA]
¡û
>W1810058591
PDKA01000005
Campylobacterota
Arcobacter sp. FW59 [PDKA]
49244
49320
+
Met
CAT
[ENA]
¡û
>W1810295906
PTIW01000011
Campylobacterota
Malaciobacter marinus MARC-MIP3H16 [PTIW]
42837
42761
-
Met
CAT
[ENA]
¡û
>W1810295931
PTIW01000037
Campylobacterota
Malaciobacter marinus MARC-MIP3H16 [PTIW]
3192
3116
-
Met
CAT
[ENA]
¡û
>W1810462551
PZYW01000001
Campylobacterota
Poseidonibacter lekithochrous LMG 28652 [PZYW]
196055
195979
-
Met
CAT
[ENA]
¡û
>W10106127
ACYG01000030
Campylobacterota
Campylobacter gracilis RM3268 [ACYG]
192063
192139
+
Met
CAT
[ENA]
¡û
>C10100561
CP001999
Campylobacterota
Arcobacter nitrofigilis DSM 7299 [CP001999]
2696006
2696082
+
Met
CAT
[Ensembl]
¡û
>C10107577
FN555004
Campylobacterota
Helicobacter mustelae 12198 [FN555004]
289549
289625
+
Met
CAT
[Ensembl]
¡û
>C11101044
AP012048
Campylobacterota
Arcobacter sp. L [AP012048]
1581269
1581345
+
Met
CAT
[Ensembl]
¡û
>W11108450
ACYG01000030
Campylobacterota
Campylobacter gracilis RM3268 [ACYG]
192063
192139
+
Met
CAT
[ENA]
¡û
>W1511205864
JMTI01000016
Campylobacterota
Campylobacter sputorum biovar sputorum INTA08/209 [JMTI]
82494
82570
+
Met
CAT
[ENA]
¡û
>W1511327950
JQIT01000004
Campylobacterota
Sulfuricurvum sp. PC08-66 [JQIT]
175023
175099
+
Met
CAT
[ENA]
¡û
>W1511365479
JSEC01000015
Campylobacterota
Sulfurospirillum sp. MES [JSEC]
10567
10643
+
Met
CAT
[ENA]
¡û
>W1511517361
JXXG01000001
Campylobacterota
Halarcobacter anaerophilus IR-1 [JXXG]
105245
105321
+
Met
CAT
[ENA]
¡û
>C161001424
AP014724
Campylobacterota
Sulfurospirillum cavolei UCH003 [AP014724]
1859337
1859261
-
Met
CAT
-
¡û
>W121086898
AKKQ01000001
Campylobacterota
Thiovulum sp. ES [AKKQ]
62495
62419
-
Met
CAT
[ENA]
¡û
>WENV069201
AACY023756624
Marine microbial communities from Global Ocean Sampling (GOS)
644
566
-
Met
CAT
[ENA]
>W1610419696
FIZO01000001
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZO]
339363
339439
+
Met
CAT
[ENA]
¡û
>W1610419748
FIZP01000001
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZP]
292483
292407
-
Met
CAT
[ENA]
¡û
>W1610419798
FIZQ01000005
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZQ]
39059
38983
-
Met
CAT
[ENA]
¡û
>W1610835346
LPNY01000132
Campylobacterota
Arcobacter sp. EP1 [LPNY]
126785
126709
-
Met
CAT
[ENA]
¡û
>W1610896406
LRUS01000082
Campylobacterota
Aliarcobacter cryaerophilus [LRUS]
59485
59561
+
Met
CAT
[ENA]
¡û
>W1610947485
LVAC01000026
Campylobacterota
Campylobacterales bacterium Epsilon_01 [LVAC]
10600
10676
+
Met
CAT
[ENA]
¡û
>W1710082855
BDIR01000003
Campylobacterota
Arcobacter sp. LA11 [BDIR]
53513
53589
+
Met
CAT
[ENA]
¡û
>W1710419432
FIZO01000001
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZO]
339363
339439
+
Met
CAT
[ENA]
¡û
>W1710419484
FIZP01000001
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZP]
292483
292407
-
Met
CAT
[ENA]
¡û
>W1710419534
FIZQ01000005
Campylobacterota
Campylobacter geochelonis subsp. fetus [FIZQ]
39059
38983
-
Met
CAT
[ENA]
¡û
>W1710602843
FUYO01000023
Campylobacterota
Malaciobacter marinus [FUYO]
42144
42068
-
Met
CAT
[ENA]
¡û
>W1710602857
FUYO01000040
Campylobacterota
Malaciobacter marinus [FUYO]
19501
19577
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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