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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.153036 (5 seq.)
>C09100521
CP000922
Bacillota
Anoxybacillus flavithermus WK1 [CP000922]
2339683
2339606
-
Met
CAT
[Ensembl]
¡û
>C153000517
CP008712
Bacillota
Bacillus cereus FT9 [CP008712]
285211
285288
+
Met
CAT
[Ensembl]
¡û
>C243006198
CP126520
Bacillota
Bacillus toyonensis Cuernavaca_S4 [CP126520]
242505
242582
+
fMet
CAT
-
¡û
>W1630004545
FBXQ01000003
Bacillota
Bacillus anthracis [FBXQ]
403840
403764
-
Met
CAT
[ENA]
¡û
>W1730003832
FBXQ01000003
Bacillota
Bacillus anthracis [FBXQ]
403840
403764
-
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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