This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.155147 (241 seq.)
>W131204928
ATCI01000011
Bacteroidota
Capnocytophaga sp. oral taxon 336 oral taxon 336 str. F0502 [ATCI]
84240
84164
-
Ala
GGC
[ENA]
¡û
>W131225350
AUDM01000012
Bacteroidota
Flavobacterium filum DSM 17961 [AUDM]
1123
1199
+
Ala
GGC
[ENA]
¡û
>WENV180010945
FLSI01030950
[FLSI] metagenome; saliva
256
182
-
Ala
GGC
[ENA]
¢þ
>WENV180226189
OBBP01085777
[OBBP] human oral metagenome; human oral
15
89
+
Ala
GGC
[ENA]
¢þ
>W141042703
AMES01000100
Bacteroidota
Capnocytophaga sp. oral taxon 380 oral taxon 380 str. F0488 [AMES]
19526
19602
+
Ala
GGC
[ENA]
¡û
>W141042759
AMEU01000041
Bacteroidota
Capnocytophaga sp. oral taxon 326 oral taxon 326 str. F0382 [AMEU]
163956
164032
+
Ala
GGC
[ENA]
¡û
>W141042796
AMEV01000033
Bacteroidota
Capnocytophaga sp. oral taxon 324 oral taxon 324 str. F0483 [AMEV]
11757
11681
-
Ala
GGC
[ENA]
¡û
>WENV180697830
ODDE01006458
[ODDE] human metagenome; G_DNA_Supragingival plaque
433
359
-
Ala
GGC
[ENA]
¢þ
>WENV180718572
ODGG01015854
[ODGG] human metagenome; G_DNA_Buccal mucosa
499
425
-
Ala
GGC
[ENA]
¢þ
>WENV180720022
ODGJ01013871
[ODGJ] human metagenome; G_DNA_Tongue dorsum
2026
2100
+
Ala
GGC
[ENA]
¢þ
>WENV180726900
ODGU01000969
[ODGU] human metagenome; G_DNA_Supragingival plaque
3749
3675
-
Ala
GGC
[ENA]
¢þ
>WENV180727059
ODGU01001871
[ODGU] human metagenome; G_DNA_Supragingival plaque
3539
3613
+
Ala
GGC
[ENA]
¢þ
>WENV180727238
ODGU01003348
[ODGU] human metagenome; G_DNA_Supragingival plaque
77
3
-
Ala
GGC
[ENA]
¢þ
>WENV180727581
ODGU01008141
[ODGU] human metagenome; G_DNA_Supragingival plaque
2214
2140
-
Ala
GGC
[ENA]
¢þ
>WENV180728327
ODGU01038841
[ODGU] human metagenome; G_DNA_Supragingival plaque
515
441
-
Ala
GGC
[ENA]
¢þ
>WENV180732468
ODGY01000674
[ODGY] human metagenome; G_DNA_Supragingival plaque
15236
15310
+
Ala
GGC
[ENA]
¢þ
>WENV180732724
ODGY01003014
[ODGY] human metagenome; G_DNA_Supragingival plaque
2115
2189
+
Ala
GGC
[ENA]
¢þ
>WENV180732952
ODGY01009549
[ODGY] human metagenome; G_DNA_Supragingival plaque
77
3
-
Ala
GGC
[ENA]
¢þ
>WENV180734264
ODGZ01004481
[ODGZ] human metagenome; G_DNA_Supragingival plaque
2110
2184
+
Ala
GGC
[ENA]
¢þ
>WENV180734302
ODGZ01005253
[ODGZ] human metagenome; G_DNA_Supragingival plaque
77
3
-
Ala
GGC
[ENA]
¢þ
>WENV180735853
ODHB01001111
[ODHB] human metagenome; G_DNA_Supragingival plaque
1620
1694
+
Ala
GGC
[ENA]
¢þ
>WENV180738523
ODHD01000070
[ODHD] human metagenome; G_DNA_Supragingival plaque
11083
11157
+
Ala
GGC
[ENA]
¢þ
>WENV180738765
ODHD01000469
[ODHD] human metagenome; G_DNA_Supragingival plaque
5216
5140
-
Ala
GGC
[ENA]
¢þ
>WENV180739052
ODHD01003783
[ODHD] human metagenome; G_DNA_Supragingival plaque
2985
3059
+
Ala
GGC
[ENA]
¢þ
>WENV180750493
ODHS01002834
[ODHS] human metagenome; G_DNA_Supragingival plaque
2929
2855
-
Ala
GGC
[ENA]
¢þ
>WENV180750655
ODHS01005157
[ODHS] human metagenome; G_DNA_Supragingival plaque
3489
3415
-
Ala
GGC
[ENA]
¢þ
>WENV180750845
ODHS01010051
[ODHS] human metagenome; G_DNA_Supragingival plaque
2397
2323
-
Ala
GGC
[ENA]
¢þ
>WENV180751581
ODHS01078998
[ODHS] human metagenome; G_DNA_Supragingival plaque
1
75
+
Ala
GGC
[ENA]
¢þ
>WENV180754879
ODHU01002420
[ODHU] human metagenome; G_DNA_Supragingival plaque
739
813
+
Ala
GGC
[ENA]
¢þ
>WENV180765214
ODIB01044038
[ODIB] human metagenome; G_DNA_Supragingival plaque
328
402
+
Ala
GGC
[ENA]
¢þ
>WENV180767579
ODIG01000211
[ODIG] human metagenome; G_DNA_Tongue dorsum
40299
40373
+
Ala
GGC
[ENA]
¢þ
>WENV180770040
ODIG01335589
[ODIG] human metagenome; G_DNA_Tongue dorsum
2
76
+
Ala
GGC
[ENA]
¢þ
>WENV180777508
ODIL01011655
[ODIL] human metagenome; G_DNA_Supragingival plaque
961
1035
+
Ala
GGC
[ENA]
¢þ
>WENV180777840
ODIM01000004
[ODIM] human metagenome; G_DNA_Supragingival plaque
75555
75481
-
Ala
GGC
[ENA]
¢þ
>WENV180778268
ODIM01002507
[ODIM] human metagenome; G_DNA_Supragingival plaque
306
232
-
Ala
GGC
[ENA]
¢þ
>WENV180779486
ODIN01005327
[ODIN] human metagenome; G_DNA_Throat
3190
3264
+
Ala
GGC
[ENA]
¢þ
>WENV180781960
ODIP01009897
[ODIP] human metagenome; G_DNA_Supragingival plaque
1212
1138
-
Ala
GGC
[ENA]
¢þ
>WENV180787058
ODIS01001006
[ODIS] human metagenome; G_DNA_Supragingival plaque
4005
3929
-
Ala
GGC
[ENA]
¢þ
>WENV180787890
ODIS01020138
[ODIS] human metagenome; G_DNA_Supragingival plaque
2039
2113
+
Ala
GGC
[ENA]
¢þ
>WENV180787902
ODIS01020661
[ODIS] human metagenome; G_DNA_Supragingival plaque
993
1067
+
Ala
GGC
[ENA]
¢þ
>WENV180795958
ODJB01000753
[ODJB] human metagenome; G_DNA_Supragingival plaque
14496
14422
-
Ala
GGC
[ENA]
¢þ
>WENV180796475
ODJB01005310
[ODJB] human metagenome; G_DNA_Supragingival plaque
3346
3272
-
Ala
GGC
[ENA]
¢þ
>WENV180800505
ODJD01000061
[ODJD] human metagenome; G_DNA_Supragingival plaque
2226
2300
+
Ala
GGC
[ENA]
¢þ
>WENV180803509
ODJE01209020
[ODJE] human metagenome; G_DNA_Tongue dorsum
121
47
-
Ala
GGC
[ENA]
¢þ
>WENV180803867
ODJG01000129
[ODJG] human metagenome; G_DNA_Supragingival plaque
2756
2830
+
Ala
GGC
[ENA]
¢þ
>WENV180804205
ODJG01001085
[ODJG] human metagenome; G_DNA_Supragingival plaque
11360
11286
-
Ala
GGC
[ENA]
¢þ
>WENV180806777
ODJI01000022
[ODJI] human metagenome; G_DNA_Tongue dorsum
80605
80679
+
Ala
GGC
[ENA]
¢þ
>WENV180808733
ODJK01000760
[ODJK] human metagenome; G_DNA_Subgingival plaque
2
76
+
Ala
GGC
[ENA]
¢þ
>WENV180813300
ODJO01000316
[ODJO] human metagenome; G_DNA_Supragingival plaque
10733
10807
+
Ala
GGC
[ENA]
¢þ
>WENV180813358
ODJO01000420
[ODJO] human metagenome; G_DNA_Supragingival plaque
9115
9041
-
Ala
GGC
[ENA]
¢þ
>WENV180813360
ODJO01000452
[ODJO] human metagenome; G_DNA_Supragingival plaque
2112
2186
+
Ala
GGC
[ENA]
¢þ
>WENV180813502
ODJO01000907
[ODJO] human metagenome; G_DNA_Supragingival plaque
19400
19474
+
Ala
GGC
[ENA]
¢þ
>WENV180816923
ODJP01121256
[ODJP] human metagenome; G_DNA_Tongue dorsum
199
125
-
Ala
GGC
[ENA]
¢þ
>WENV180822273
ODJT01000180
[ODJT] human metagenome; G_DNA_Supragingival plaque
30041
29967
-
Ala
GGC
[ENA]
¢þ
>WENV180823413
ODJW01028510
[ODJW] human metagenome; G_DNA_Supragingival plaque
102
28
-
Ala
GGC
[ENA]
¢þ
>WENV180823909
ODJX01000009
[ODJX] human metagenome; G_DNA_Supragingival plaque
11293
11367
+
Ala
GGC
[ENA]
¢þ
>WENV180831446
ODKB01200553
[ODKB] human metagenome; G_DNA_Tongue dorsum
179
105
-
Ala
GGC
[ENA]
¢þ
>WENV180832074
ODKC01000439
[ODKC] human metagenome; G_DNA_Supragingival plaque
13638
13712
+
Ala
GGC
[ENA]
¢þ
>WENV180832481
ODKC01001850
[ODKC] human metagenome; G_DNA_Supragingival plaque
4772
4698
-
Ala
GGC
[ENA]
¢þ
>WENV180833805
ODKD01000325
[ODKD] human metagenome; G_DNA_Supragingival plaque
18091
18165
+
Ala
GGC
[ENA]
¢þ
>WENV180835459
ODKE01003646
[ODKE] human metagenome; G_DNA_Supragingival plaque
1266
1192
-
Ala
GGC
[ENA]
¢þ
>WENV180835715
ODKE01009657
[ODKE] human metagenome; G_DNA_Supragingival plaque
1121
1047
-
Ala
GGC
[ENA]
¢þ
>WENV180835747
ODKE01010846
[ODKE] human metagenome; G_DNA_Supragingival plaque
2108
2182
+
Ala
GGC
[ENA]
¢þ
>WENV180843809
ODKN01012952
[ODKN] human metagenome; G_DNA_Supragingival plaque
78
4
-
Ala
GGC
[ENA]
¢þ
>WENV180845544
ODKT01000784
[ODKT] human metagenome; G_DNA_Supragingival plaque
9748
9822
+
Ala
GGC
[ENA]
¢þ
>WENV180846008
ODKT01003877
[ODKT] human metagenome; G_DNA_Supragingival plaque
5298
5224
-
Ala
GGC
[ENA]
¢þ
>WENV180846126
ODKT01005611
[ODKT] human metagenome; G_DNA_Supragingival plaque
5601
5675
+
Ala
GGC
[ENA]
¢þ
>WENV180847604
ODKT01117163
[ODKT] human metagenome; G_DNA_Supragingival plaque
2
76
+
Ala
GGC
[ENA]
¢þ
>WENV180852235
ODKW01000161
[ODKW] human metagenome; G_DNA_Tongue dorsum
2808
2882
+
Ala
GGC
[ENA]
¢þ
>WENV180852736
ODKW01004752
[ODKW] human metagenome; G_DNA_Tongue dorsum
2664
2738
+
Ala
GGC
[ENA]
¢þ
>WENV180859365
ODLD01000495
[ODLD] human metagenome; G_DNA_Supragingival plaque
15981
16055
+
Ala
GGC
[ENA]
¢þ
>WENV180859714
ODLD01002912
[ODLD] human metagenome; G_DNA_Supragingival plaque
3379
3305
-
Ala
GGC
[ENA]
¢þ
>WENV180861146
ODLE01001081
[ODLE] human metagenome; G_DNA_Tongue dorsum
13702
13628
-
Ala
GGC
[ENA]
¢þ
>WENV180880916
ODLZ01089372
[ODLZ] human metagenome; G_DNA_Tongue dorsum
162
88
-
Ala
GGC
[ENA]
¢þ
>WENV180888119
ODMN01000073
[ODMN] human metagenome; G_DNA_Supragingival plaque
6230
6156
-
Ala
GGC
[ENA]
¢þ
>WENV180888241
ODMN01000278
[ODMN] human metagenome; G_DNA_Supragingival plaque
32937
33011
+
Ala
GGC
[ENA]
¢þ
>WENV180888598
ODMN01001832
[ODMN] human metagenome; G_DNA_Supragingival plaque
3996
3922
-
Ala
GGC
[ENA]
¢þ
>WENV180888896
ODMN01005492
[ODMN] human metagenome; G_DNA_Supragingival plaque
1107
1033
-
Ala
GGC
[ENA]
¢þ
>WENV180891392
ODMQ01000009
[ODMQ] human metagenome; G_DNA_Supragingival plaque
2121
2195
+
Ala
GGC
[ENA]
¢þ
>WENV180921698
ODTJ01000262
[ODTJ] human metagenome; G_DNA_Supragingival plaque
34423
34497
+
Ala
GGC
[ENA]
¢þ
>WENV180921882
ODTJ01000597
[ODTJ] human metagenome; G_DNA_Supragingival plaque
19629
19703
+
Ala
GGC
[ENA]
¢þ
>WENV180922050
ODTJ01001123
[ODTJ] human metagenome; G_DNA_Supragingival plaque
4497
4423
-
Ala
GGC
[ENA]
¢þ
>WENV180924017
ODTK01000749
[ODTK] human metagenome; G_DNA_Supragingival plaque
15291
15217
-
Ala
GGC
[ENA]
¢þ
>WENV180924220
ODTK01002011
[ODTK] human metagenome; G_DNA_Supragingival plaque
81
7
-
Ala
GGC
[ENA]
¢þ
>WENV180924346
ODTK01003507
[ODTK] human metagenome; G_DNA_Supragingival plaque
3318
3244
-
Ala
GGC
[ENA]
¢þ
>WENV180924571
ODTK01007842
[ODTK] human metagenome; G_DNA_Supragingival plaque
1652
1578
-
Ala
GGC
[ENA]
¢þ
>WENV180927858
ODTM01005503
[ODTM] human metagenome; G_DNA_Supragingival plaque
3541
3615
+
Ala
GGC
[ENA]
¢þ
>WENV180928144
ODTM01017149
[ODTM] human metagenome; G_DNA_Supragingival plaque
1404
1478
+
Ala
GGC
[ENA]
¢þ
>WENV180928764
ODTM01221174
[ODTM] human metagenome; G_DNA_Supragingival plaque
77
3
-
Ala
GGC
[ENA]
¢þ
>WENV180930952
ODTP01000827
[ODTP] human metagenome; G_DNA_Tongue dorsum
20739
20665
-
Ala
GGC
[ENA]
¢þ
>WENV180934003
ODTR01010772
[ODTR] human metagenome; G_DNA_Supragingival plaque
1310
1384
+
Ala
GGC
[ENA]
¢þ
>WENV180935190
ODTS01099520
[ODTS] human metagenome; G_DNA_Subgingival plaque
117
43
-
Ala
GGC
[ENA]
¢þ
>WENV180937287
ODTV01051048
[ODTV] human metagenome; G_DNA_Buccal mucosa
331
257
-
Ala
GGC
[ENA]
¢þ
>WENV180937882
ODTX01000155
[ODTX] human metagenome; G_DNA_Supragingival plaque
10758
10832
+
Ala
GGC
[ENA]
¢þ
>WENV180939463
ODTX01039376
[ODTX] human metagenome; G_DNA_Supragingival plaque
91
17
-
Ala
GGC
[ENA]
¢þ
>WENV180943796
ODUC01002639
[ODUC] human metagenome; G_DNA_Supragingival plaque
1777
1701
-
Ala
GGC
[ENA]
¢þ
>WENV180944224
ODUC01010728
[ODUC] human metagenome; G_DNA_Supragingival plaque
3710
3784
+
Ala
GGC
[ENA]
¢þ
>WENV180944377
ODUC01015516
[ODUC] human metagenome; G_DNA_Supragingival plaque
807
733
-
Ala
GGC
[ENA]
¢þ
>WENV180948234
ODUG01000528
[ODUG] human metagenome; G_DNA_Tongue dorsum
2928
2854
-
Ala
GGC
[ENA]
¢þ
>WENV180950915
ODUH01003909
[ODUH] human metagenome; G_DNA_Subgingival plaque
2833
2759
-
Ala
GGC
[ENA]
¢þ
>WENV180954156
ODUJ01000464
[ODUJ] human metagenome; G_DNA_Tongue dorsum
10235
10309
+
Ala
GGC
[ENA]
¢þ
>WENV180964249
ODUO01000763
[ODUO] human metagenome; G_DNA_Supragingival plaque
15273
15347
+
Ala
GGC
[ENA]
¢þ
>WENV180973665
ODUW01011728
[ODUW] human metagenome; G_DNA_Supragingival plaque
1060
984
-
Ala
GGC
[ENA]
¢þ
>WENV180973716
ODUW01014562
[ODUW] human metagenome; G_DNA_Supragingival plaque
1912
1986
+
Ala
GGC
[ENA]
¢þ
>WENV180973934
ODUW01030005
[ODUW] human metagenome; G_DNA_Supragingival plaque
932
1006
+
Ala
GGC
[ENA]
¢þ
>WENV180976300
ODUY01072793
[ODUY] human metagenome; G_DNA_Supragingival plaque
476
550
+
Ala
GGC
[ENA]
¢þ
>WENV180977646
ODUZ01002821
[ODUZ] human metagenome; G_DNA_Tongue dorsum
2762
2836
+
Ala
GGC
[ENA]
¢þ
>WENV180980594
ODVE01000667
[ODVE] human metagenome; G_DNA_Supragingival plaque
3881
3955
+
Ala
GGC
[ENA]
¢þ
>WENV180980860
ODVE01002789
[ODVE] human metagenome; G_DNA_Supragingival plaque
2245
2319
+
Ala
GGC
[ENA]
¢þ
>WENV180980942
ODVE01004019
[ODVE] human metagenome; G_DNA_Supragingival plaque
1506
1432
-
Ala
GGC
[ENA]
¢þ
>WENV180982701
ODVF01000345
[ODVF] human metagenome; G_DNA_Supragingival plaque
29117
29191
+
Ala
GGC
[ENA]
¢þ
>WENV180983109
ODVF01003613
[ODVF] human metagenome; G_DNA_Supragingival plaque
2982
2908
-
Ala
GGC
[ENA]
¢þ
>WENV180983946
ODVF01067806
[ODVF] human metagenome; G_DNA_Supragingival plaque
540
614
+
Ala
GGC
[ENA]
¢þ
>WENV180985478
ODVJ01006086
[ODVJ] human metagenome; G_DNA_Tongue dorsum
353
279
-
Ala
GGC
[ENA]
¢þ
>WENV180986776
ODVK01000780
[ODVK] human metagenome; G_DNA_Supragingival plaque
9672
9748
+
Ala
GGC
[ENA]
¢þ
>WENV180986822
ODVK01001038
[ODVK] human metagenome; G_DNA_Supragingival plaque
4359
4285
-
Ala
GGC
[ENA]
¢þ
>WENV180990227
ODVN01000630
[ODVN] human metagenome; G_DNA_Tongue dorsum
5391
5465
+
Ala
GGC
[ENA]
¢þ
>WENV180990783
ODVN01004915
[ODVN] human metagenome; G_DNA_Tongue dorsum
227
153
-
Ala
GGC
[ENA]
¢þ
>WENV180992093
ODVO01041427
[ODVO] human metagenome; G_DNA_Buccal mucosa
218
144
-
Ala
GGC
[ENA]
¢þ
>WENV180998102
ODVT01000016
[ODVT] human metagenome; G_DNA_Buccal mucosa
123674
123748
+
Ala
GGC
[ENA]
¢þ
>WENV180998638
ODVT01001049
[ODVT] human metagenome; G_DNA_Buccal mucosa
1490
1416
-
Ala
GGC
[ENA]
¢þ
>WENV180999072
ODVT01005840
[ODVT] human metagenome; G_DNA_Buccal mucosa
178
104
-
Ala
GGC
[ENA]
¢þ
>WENV180999078
ODVT01005897
[ODVT] human metagenome; G_DNA_Buccal mucosa
178
104
-
Ala
GGC
[ENA]
¢þ
>WENV181002410
ODVX01000328
[ODVX] human metagenome; G_DNA_Supragingival plaque
29982
29908
-
Ala
GGC
[ENA]
¢þ
>WENV181002637
ODVX01000964
[ODVX] human metagenome; G_DNA_Supragingival plaque
4237
4311
+
Ala
GGC
[ENA]
¢þ
>WENV181002680
ODVX01001175
[ODVX] human metagenome; G_DNA_Supragingival plaque
17289
17363
+
Ala
GGC
[ENA]
¢þ
>WENV181003393
ODVX01011259
[ODVX] human metagenome; G_DNA_Supragingival plaque
2684
2758
+
Ala
GGC
[ENA]
¢þ
>WENV181006021
ODWA01000494
[ODWA] human metagenome; G_DNA_Buccal mucosa
2206
2280
+
Ala
GGC
[ENA]
¢þ
>WENV181007678
ODWE01000455
[ODWE] human metagenome; G_DNA_Supragingival plaque
35348
35274
-
Ala
GGC
[ENA]
¢þ
>WENV181007943
ODWE01001254
[ODWE] human metagenome; G_DNA_Supragingival plaque
2083
2157
+
Ala
GGC
[ENA]
¢þ
>WENV181008595
ODWE01008302
[ODWE] human metagenome; G_DNA_Supragingival plaque
2044
1970
-
Ala
GGC
[ENA]
¢þ
>WENV181009205
ODWE01039457
[ODWE] human metagenome; G_DNA_Supragingival plaque
1003
1077
+
Ala
GGC
[ENA]
¢þ
>WENV181010559
ODWH01059623
[ODWH] human metagenome; G_DNA_Buccal mucosa
227
153
-
Ala
GGC
[ENA]
¢þ
>WENV181012566
ODWK01001436
[ODWK] human metagenome; G_DNA_Supragingival plaque
2754
2828
+
Ala
GGC
[ENA]
¢þ
>WENV181018755
ODWU01000060
[ODWU] human metagenome; G_DNA_Supragingival plaque
2057
2131
+
Ala
GGC
[ENA]
¢þ
>WENV181019779
ODWU01014201
[ODWU] human metagenome; G_DNA_Supragingival plaque
2112
2186
+
Ala
GGC
[ENA]
¢þ
>WENV181020129
ODWU01060046
[ODWU] human metagenome; G_DNA_Supragingival plaque
548
622
+
Ala
GGC
[ENA]
¢þ
>WENV181029456
ODXF01000290
[ODXF] human metagenome; G_DNA_Supragingival plaque
17899
17825
-
Ala
GGC
[ENA]
¢þ
>WENV181042604
ODXU01001484
[ODXU] human metagenome; G_DNA_Buccal mucosa
1383
1457
+
Ala
GGC
[ENA]
¢þ
>WENV181042793
ODXU01008029
[ODXU] human metagenome; G_DNA_Buccal mucosa
524
598
+
Ala
GGC
[ENA]
¢þ
>WENV181043846
ODXV01001046
[ODXV] human metagenome; G_DNA_Tongue dorsum
10427
10353
-
Ala
GGC
[ENA]
¢þ
>WENV181049587
ODYD01000780
[ODYD] human metagenome; G_DNA_Supragingival plaque
257
183
-
Ala
GGC
[ENA]
¢þ
>WENV181049655
ODYD01001139
[ODYD] human metagenome; G_DNA_Supragingival plaque
9647
9721
+
Ala
GGC
[ENA]
¢þ
>WENV181050287
ODYD01011796
[ODYD] human metagenome; G_DNA_Supragingival plaque
2113
2187
+
Ala
GGC
[ENA]
¢þ
>WENV181059335
ODYM01000674
[ODYM] human metagenome; G_DNA_Tongue dorsum
1702
1776
+
Ala
GGC
[ENA]
¢þ
>WENV181059532
ODYM01002134
[ODYM] human metagenome; G_DNA_Tongue dorsum
2087
2161
+
Ala
GGC
[ENA]
¢þ
>WENV181063818
ODYP01003932
[ODYP] human metagenome; G_DNA_Supragingival plaque
3566
3492
-
Ala
GGC
[ENA]
¢þ
>WENV181064058
ODYP01008769
[ODYP] human metagenome; G_DNA_Supragingival plaque
3156
3230
+
Ala
GGC
[ENA]
¢þ
>WENV181064194
ODYP01013391
[ODYP] human metagenome; G_DNA_Supragingival plaque
383
309
-
Ala
GGC
[ENA]
¢þ
>WENV181066929
ODZI01003526
[ODZI] human metagenome; G_DNA_Supragingival plaque
3749
3823
+
Ala
GGC
[ENA]
¢þ
>WENV181066932
ODZI01003543
[ODZI] human metagenome; G_DNA_Supragingival plaque
2231
2157
-
Ala
GGC
[ENA]
¢þ
>WENV181067230
ODZI01009687
[ODZI] human metagenome; G_DNA_Supragingival plaque
319
245
-
Ala
GGC
[ENA]
¢þ
>WENV181067377
ODZI01015551
[ODZI] human metagenome; G_DNA_Supragingival plaque
2112
2186
+
Ala
GGC
[ENA]
¢þ
>WENV181069897
OEAE01000033
[OEAE] human metagenome; G_DNA_Supragingival plaque
7621
7547
-
Ala
GGC
[ENA]
¢þ
>WENV181076010
OEAP01001228
[OEAP] human metagenome; G_DNA_Supragingival plaque
15259
15333
+
Ala
GGC
[ENA]
¢þ
>WENV181077185
OEAP01031263
[OEAP] human metagenome; G_DNA_Supragingival plaque
637
563
-
Ala
GGC
[ENA]
¢þ
>WENV181080145
OEAS01028852
[OEAS] human metagenome; G_DNA_Supragingival plaque
2108
2182
+
Ala
GGC
[ENA]
¢þ
>WENV181080762
OEAS01078924
[OEAS] human metagenome; G_DNA_Supragingival plaque
928
1002
+
Ala
GGC
[ENA]
¢þ
>WENV181082958
OEAV01001408
[OEAV] human metagenome; G_DNA_Supragingival plaque
7509
7435
-
Ala
GGC
[ENA]
¢þ
>WENV181083439
OEAV01007512
[OEAV] human metagenome; G_DNA_Supragingival plaque
2286
2360
+
Ala
GGC
[ENA]
¢þ
>WENV181083625
OEAV01014585
[OEAV] human metagenome; G_DNA_Supragingival plaque
2113
2187
+
Ala
GGC
[ENA]
¢þ
>WENV181084617
OEAX01000003
[OEAX] human metagenome; G_DNA_Tongue dorsum
80605
80679
+
Ala
GGC
[ENA]
¢þ
>WENV181090993
OEBC01008157
[OEBC] human metagenome; G_DNA_Supragingival plaque
1388
1314
-
Ala
GGC
[ENA]
¢þ
>WENV181091138
OEBC01014369
[OEBC] human metagenome; G_DNA_Supragingival plaque
363
289
-
Ala
GGC
[ENA]
¢þ
>WENV181096446
OEBY01140121
[OEBY] human metagenome; G_DNA_Tongue dorsum
229
155
-
Ala
GGC
[ENA]
¢þ
>WENV181107287
OEEI01004370
[OEEI] human metagenome; G_DNA_Supragingival plaque
3568
3494
-
Ala
GGC
[ENA]
¢þ
>WENV181115486
OEEO01102803
[OEEO] human metagenome; G_DNA_Supragingival plaque
142
216
+
Ala
GGC
[ENA]
¢þ
>WENV181120241
OEFJ01013642
[OEFJ] human metagenome; G_DNA_Attached/Keratinized gingiva
492
566
+
Ala
GGC
[ENA]
¢þ
>WENV181121642
OEFL01011706
[OEFL] human metagenome; G_DNA_Supragingival plaque
77
3
-
Ala
GGC
[ENA]
¢þ
>WENV181123588
OEFQ01000056
[OEFQ] human metagenome; G_DNA_Supragingival plaque
61569
61495
-
Ala
GGC
[ENA]
¢þ
>WENV181123850
OEFQ01001523
[OEFQ] human metagenome; G_DNA_Supragingival plaque
1091
1017
-
Ala
GGC
[ENA]
¢þ
>WENV181125821
OEFU01045495
[OEFU] human metagenome; G_DNA_Saliva
145
219
+
Ala
GGC
[ENA]
¢þ
>WENV181136447
OEGI01007146
[OEGI] human metagenome; G_DNA_Supragingival plaque
300
226
-
Ala
GGC
[ENA]
¢þ
>WENV181137640
OEGJ01010785
[OEGJ] human metagenome; G_DNA_Supragingival plaque
1965
2039
+
Ala
GGC
[ENA]
¢þ
>WENV181140691
OEGT01000056
[OEGT] human metagenome; G_DNA_Throat
43654
43728
+
Ala
GGC
[ENA]
¢þ
>WENV181140843
OEGT01000218
[OEGT] human metagenome; G_DNA_Throat
2103
2029
-
Ala
GGC
[ENA]
¢þ
>WENV181143021
OEHM01000052
[OEHM] human metagenome; G_DNA_Supragingival plaque
33584
33658
+
Ala
GGC
[ENA]
¢þ
>WENV181146118
OEHQ01001084
[OEHQ] human metagenome; G_DNA_Supragingival plaque
3500
3574
+
Ala
GGC
[ENA]
¢þ
>WENV181150222
OEHW01001052
[OEHW] human metagenome; G_DNA_Tongue dorsum
13654
13580
-
Ala
GGC
[ENA]
¢þ
>WENV181152186
OEIA01000303
[OEIA] human metagenome; G_DNA_Supragingival plaque
3366
3292
-
Ala
GGC
[ENA]
¢þ
>WENV181153000
OEIA01013592
[OEIA] human metagenome; G_DNA_Supragingival plaque
237
163
-
Ala
GGC
[ENA]
¢þ
>WENV181155837
OEIE01000219
[OEIE] human metagenome; G_DNA_Supragingival plaque
21246
21322
+
Ala
GGC
[ENA]
¢þ
>WENV181155868
OEIE01000380
[OEIE] human metagenome; G_DNA_Supragingival plaque
15051
15125
+
Ala
GGC
[ENA]
¢þ
>WENV181156171
OEIE01004380
[OEIE] human metagenome; G_DNA_Supragingival plaque
2242
2316
+
Ala
GGC
[ENA]
¢þ
>WENV181158733
OEIH01008127
[OEIH] human metagenome; G_DNA_Supragingival plaque
2067
2141
+
Ala
GGC
[ENA]
¢þ
>WENV181161102
OEIK01139701
[OEIK] human metagenome; G_DNA_Supragingival plaque
1
75
+
Ala
GGC
[ENA]
¢þ
>WENV181169828
OEIV010011241
[OEIV] activated sludge metagenome; Wastewater treatment plant of a petroleum refinery complex
273
199
-
Ala
GGC
[ENA]
¢þ
>WENV181177283
OEJS01000418
[OEJS] human metagenome; G_DNA_Supragingival plaque
319
245
-
Ala
GGC
[ENA]
¢þ
>WENV181179506
OEJT01006429
[OEJT] human metagenome; G_DNA_Supragingival plaque
1601
1527
-
Ala
GGC
[ENA]
¢þ
>WENV181179883
OEJT01025071
[OEJT] human metagenome; G_DNA_Supragingival plaque
67
141
+
Ala
GGC
[ENA]
¢þ
>WENV181180218
OEJT01132728
[OEJT] human metagenome; G_DNA_Supragingival plaque
200
126
-
Ala
GGC
[ENA]
¢þ
>WENV181180690
OEJU01000645
[OEJU] human metagenome; G_DNA_Supragingival plaque
9667
9741
+
Ala
GGC
[ENA]
¢þ
>WENV181180912
OEJU01001854
[OEJU] human metagenome; G_DNA_Supragingival plaque
6539
6465
-
Ala
GGC
[ENA]
¢þ
>WENV181182246
OEJV01004359
[OEJV] human metagenome; G_DNA_Supragingival plaque
1966
2040
+
Ala
GGC
[ENA]
¢þ
>WENV181182399
OEJV01008352
[OEJV] human metagenome; G_DNA_Supragingival plaque
864
790
-
Ala
GGC
[ENA]
¢þ
>WENV181182590
OEJV01020182
[OEJV] human metagenome; G_DNA_Supragingival plaque
783
857
+
Ala
GGC
[ENA]
¢þ
>WENV181836271
OGVJ01003156
[OGVJ] freshwater metagenome; freshwater
1026
1100
+
Ala
GGC
[ENA]
¢þ
>WENV182640072
OJLB01000150
[OJLB] metagenome; surface
3575
3649
+
Ala
GGC
[ENA]
¢þ
>WENV183725682
PJQF01007560
[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
848
922
+
Ala
GGC
[ENA]
¢þ
>WENV183729746
PJTR01000043
[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment
49864
49938
+
Ala
GGC
[ENA]
¢þ
>WENV183731103
PJTS01009359
[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment
719
793
+
Ala
GGC
[ENA]
¢þ
>WENV170654472
JRYL01000009
[JRYL] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater from different
41774
41700
-
Ala
GGC
[ENA]
¢þ
>WENV170680774
LFEF01020342
[LFEF] freshwater metagenome; waterbloom
1503
1429
-
Ala
GGC
[ENA]
¢þ
>WENV170997971
MWWI01000026
[MWWI] soil metagenome; FI-1 sample; Antarctic (ecotone) soil
6941
7017
+
Ala
GGC
[ENA]
¢þ
>WENV170997972
MWWI01000026
[MWWI] soil metagenome; FI-1 sample; Antarctic (ecotone) soil
20928
21004
+
Ala
GGC
[ENA]
¢þ
>C181047504
CP020919
Bacteroidota
Flavobacterium kingsejongi WV39 [CP020919]
580335
580261
-
Ala
GGC
-
¡û
>C181055641
CP022022
Bacteroidota
Capnocytophaga endodontalis ChDC OS43 [CP022022]
2045060
2044986
-
Ala
GGC
-
¡û
>C181063548
CP022379
Bacteroidota
Capnocytophaga sputigena D1179 [CP022379]
146355
146281
-
Ala
GGC
-
¡û
>C181063596
CP022380
Bacteroidota
Capnocytophaga sp. H4358 [CP022380]
625477
625403
-
Ala
GGC
-
¡û
>C181063640
CP022381
Bacteroidota
Capnocytophaga sp. H2931 [CP022381]
617062
616988
-
Ala
GGC
-
¡û
>C181063728
CP022383
Bacteroidota
Capnocytophaga sputigena H4486 [CP022383]
152809
152735
-
Ala
GGC
-
¡û
>C181063734
CP022384
Bacteroidota
Capnocytophaga leadbetteri H6253 [CP022384]
25995
26069
+
Ala
GGC
-
¡û
>C181063821
CP022385
Bacteroidota
Capnocytophaga sputigena KC1668 [CP022385]
160083
160009
-
Ala
GGC
-
¡û
>C181147994
CP027229
Bacteroidota
Capnocytophaga sp. oral taxon 878 F0545 [CP027229]
822405
822479
+
Ala
GGC
-
¡û
>C181148132
CP027232
Bacteroidota
Capnocytophaga sp. oral taxon 864 F0512 [CP027232]
160616
160542
-
Ala
GGC
-
¡û
>C181224984
LT906449
Bacteroidota
Capnocytophaga haemolytica NCTC12947 [LT906449]
112740
112666
-
Ala
GGC
-
¡û
>C191212294
LR134489
Bacteroidota
Capnocytophaga sputigena NCTC11097 [LR134489]
146355
146281
-
Ala
GGC
-
¡û
>W09108439
ABTH01000001
Bacteroidota
Capnocytophaga ochracea DSM 7271 [ABTH]
122966
123042
+
Ala
GGC
[ENA]
¡û
>W09114680
ABZV01000003
Bacteroidota
Capnocytophaga sputigena Capno [ABZV]
145681
145605
-
Ala
GGC
[ENA]
¡û
>W1910919093
NIBW01000002
Bacteroidota
Capnocytophaga sputigena H6490 [NIBW]
658853
658779
-
Ala
GGC
[ENA]
¡û
>W1910923772
NIHE01000002
Bacteroidota
Confluentibacter lentus HJM-3 [NIHE]
656957
656883
-
Ala
GGC
[ENA]
¡û
>W1910935640
NIXN01000001
Bacteroidota
Confluentibacter citreus XJNY [NIXN]
416538
416464
-
Ala
GGC
[ENA]
¡û
>W1911239237
NSDI01000002
Bacteroidota
Capnocytophaga canis 17-158 [NSDI]
229826
229752
-
Ala
GGC
[ENA]
¡û
>W1911765441
QXCW01000002
Bacteroidota
Flavobacteriaceae bacterium MAR_2010_72 MAR_2010_72 Mar_2010_72 [QXCW]
3275272
3275198
-
Ala
GGC
[ENA]
¡û
>W1810161369
PJEO01000016
Bacteroidota
Confluentibacter flavum 3B [PJEO]
147123
147049
-
Ala
GGC
[ENA]
¡û
>W1810503592
QBKG01000007
Bacteroidota
Capnocytophaga leadbetteri DSM 22902 [QBKG]
41993
42067
+
Ala
GGC
[ENA]
¡û
>W1810695878
QLSV01000003
Bacteroidota
Flavobacterium lacus CGMCC 1.12504 [QLSV]
293009
292935
-
Ala
GGC
[ENA]
¡û
>C151095871
CP012589
Bacteroidota
Capnocytophaga sp. oral taxon 323 F0383 [CP012589]
839097
839173
+
Ala
GGC
-
¡û
>W1510076290
CDOH01000001
Bacteroidota
Capnocytophaga canis CcD95 [CDOH]
488
564
+
Ala
GGC
[ENA]
¡û
>W1510076330
CDOI01000001
Bacteroidota
Capnocytophaga canis CcD38 [CDOI]
479
555
+
Ala
GGC
[ENA]
¡û
>W1510076479
CDOL01000286
Bacteroidota
Capnocytophaga canis CcD93 [CDOL]
494
570
+
Ala
GGC
[ENA]
¡û
>C10103668
CP001632
Bacteroidota
Capnocytophaga ochracea DSM 7271 [CP001632]
51843
51919
+
Ala
GGC
[Ensembl]
¡û
>W1511453351
JVFB01000035
Bacteroidota
Capnocytophaga ochracea 490_CAPN [JVFB]
42624
42700
+
Ala
GGC
[ENA]
¡û
>W11141870
AEOH01000023
Bacteroidota
Capnocytophaga ochracea F0287 [AEOH]
2266
2342
+
Ala
GGC
[ENA]
¡û
>W11163232
AFHP01000153
Bacteroidota
Capnocytophaga sp. oral taxon 329 oral taxon 329 str. F0087 [AFHP]
204
128
-
Ala
GGC
[ENA]
¡û
>C161068892
CP014227
Bacteroidota
Capnocytophaga haemolytica CCUG 32990 [CP014227]
1751583
1751659
+
Ala
GGC
[Ensembl]
¡û
>W121073497
AJZR01000006
Bacteroidota
Capnocytophaga sp. oral taxon 412 oral taxon 412 str. F0487 [AJZR]
15801
15877
+
Ala
GGC
[ENA]
¡û
>W121081345
AKFR01000030
Bacteroidota
Capnocytophaga sp. oral taxon 335 oral taxon 335 str. F0486 [AKFR]
4165
4089
-
Ala
GGC
[ENA]
¡û
>W121081548
AKFV01000042
Bacteroidota
Capnocytophaga ochracea str. Holt 25 [AKFV]
12916
12840
-
Ala
GGC
[ENA]
¡û
>W1710507362
FMVF01000007
Bacteroidota
Flavobacterium caeni [FMVF]
202757
202831
+
Ala
GGC
[ENA]
¡û
>W1710571441
FOVX01000010
Bacteroidota
Capnocytophaga haemolytica [FOVX]
6597
6521
-
Ala
GGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK