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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.158513 (4 seq.)
>W1910805117
MTKN01000066
Bacteroidota
[Flexibacter] sp. ATCC 35208 [MTKN]
6300
6226
-
Asp
GTC
[ENA]
¡û
>W2010912829
MTKN01000066
Bacteroidota
[Flexibacter] sp. ATCC 35208 [MTKN]
6300
6226
-
Asp
GTC
[ENA]
¡û
>W2012047804
VIWA01000001
Bacteroidota
Chitinophaga pinensis 1204 [VIWA]
695365
695291
-
Asp
GTC
[ENA]
¡û
>C241281578
CP128362
Bacteroidota
Chitinophaga sp. LS1 [CP128362]
8664298
8664372
+
Asp
GTC
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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