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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.158720 (171 seq.)
>W1711018548
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
65734
65658
-
Ile
GAT
[ENA]
¡û
>W1711079613
LSOE01000011
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
135665
135741
+
Ile
GAT
[ENA]
¡û
>W1711357162
MDHB01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHB]
1125698
1125774
+
Ile
GAT
[ENA]
¡û
>W1711357202
MDHC01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHC]
11222
11298
+
Ile
GAT
[ENA]
¡û
>W1711357258
MDHD01000128
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHD]
34536
34612
+
Ile
GAT
[ENA]
¡û
>W1711357307
MDHE01000257
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHE]
34670
34746
+
Ile
GAT
[ENA]
¡û
>W1711357346
MDHF01000036
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHF]
11163
11239
+
Ile
GAT
[ENA]
¡û
>W1711357390
MDHG01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHG]
1659793
1659869
+
Ile
GAT
[ENA]
¡û
>W1711357427
MDHH01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHH]
971240
971316
+
Ile
GAT
[ENA]
¡û
>W1711357507
MDHI01000024
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHI]
533509
533585
+
Ile
GAT
[ENA]
¡û
>W1711357516
MDHJ01000001
Actinomycetota
Clavibacter michiganensis [MDHJ]
11330
11406
+
Ile
GAT
[ENA]
¡û
>W1711357592
MDHK01000066
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHK]
79005
79081
+
Ile
GAT
[ENA]
¡û
>W1711357606
MDHL01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHL]
11222
11298
+
Ile
GAT
[ENA]
¡û
>W1711357651
MDHM01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis [MDHM]
11222
11298
+
Ile
GAT
[ENA]
¡û
>W1711360713
MDJW01000009
Actinomycetota
Clavibacter michiganensis [MDJW]
66449
66373
-
Ile
GAT
[ENA]
¡û
>W1711360759
MDJX01000259
Actinomycetota
Clavibacter michiganensis [MDJX]
8017
7941
-
Ile
GAT
[ENA]
¡û
>W1711360813
MDJY01000060
Actinomycetota
Clavibacter michiganensis [MDJY]
154771
154695
-
Ile
GAT
[ENA]
¡û
>W1711360853
MDJZ01000017
Actinomycetota
Clavibacter michiganensis [MDJZ]
395343
395419
+
Ile
GAT
[ENA]
¡û
>C006133
AM711867
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NCPPB 382 [AM711867]
11222
11298
+
Ile
GAT
[Ensembl]
¡û
>W141212778
AZQZ01000003
Actinomycetota
Clavibacter michiganensis michiganensis LMG 26808 [AZQZ]
60628
60552
-
Ile
GAT
[ENA]
¡û
>C08003530
AM849034
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus ATCC 33113 [AM849034]
12281
12357
+
Ile
GAT
[Ensembl]
¡û
>WENV170700538
LIDZ01015143
[LIDZ] food metagenome; wine grapes on drying loft during traditional withering process
7013
6937
-
Ile
GAT
[ENA]
¡û
>C181048867
CP021034
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-3 [CP021034]
11230
11306
+
Ile
GAT
-
¡û
>C181048911
CP021038
Actinomycetota
Clavibacter michiganensis subsp. insidiosus ATCC 10253 [CP021038]
11230
11306
+
Ile
GAT
-
¡û
>W1910839665
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2210321
2210397
+
Ile
GAT
[ENA]
¡û
>W1910839704
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
1802191
1802267
+
Ile
GAT
[ENA]
¡û
>W1910839777
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
235688
235612
-
Ile
GAT
[ENA]
¡û
>W1910839818
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
1055437
1055361
-
Ile
GAT
[ENA]
¡û
>W1910839861
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
1150864
1150788
-
Ile
GAT
[ENA]
¡û
>W1910857483
NBWZ01000001
Actinomycetota
Subtercola boreus K300 [NBWZ]
10826
10901
+
Ile
GAT
[ENA]
¡û
>W1910857527
NBXA01000001
Actinomycetota
Subtercola boreus P27444 [NBXA]
77157
77232
+
Ile
GAT
[ENA]
¡û
>W1910857571
NBXB01000001
Actinomycetota
Subtercola boreus P27479 [NBXB]
78841
78916
+
Ile
GAT
[ENA]
¡û
>W1910857617
NBXC01000002
Actinomycetota
Subtercola boreus P27924 [NBXC]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W1910857660
NBXD01000002
Actinomycetota
Subtercola boreus P27979 [NBXD]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W1910857703
NBXE01000002
Actinomycetota
Subtercola boreus P28004 [NBXE]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W1911748133
QWDZ01000006
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
20276
20352
+
Ile
GAT
[ENA]
¡û
>W1911748169
QWEA01000001
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
20020
20096
+
Ile
GAT
[ENA]
¡û
>W1911748212
QWEB01000009
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
24894
24970
+
Ile
GAT
[ENA]
¡û
>W1911748256
QWEC01000005
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
7899
7823
-
Ile
GAT
[ENA]
¡û
>W1911748299
QWED01000001
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
26191
26267
+
Ile
GAT
[ENA]
¡û
>W1911748342
QWEE01000005
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
3172
3096
-
Ile
GAT
[ENA]
¡û
>W1911749560
QWGS01000003
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
24376
24452
+
Ile
GAT
[ENA]
¡û
>W1911749605
QWGT01000002
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
6956
6880
-
Ile
GAT
[ENA]
¡û
>W1911749648
QWGU01000003
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
6946
6870
-
Ile
GAT
[ENA]
¡û
>W1911749690
QWGV01000001
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
24402
24478
+
Ile
GAT
[ENA]
¡û
>W1911798559
QYRT01000001
Actinomycetota
Subtercola vilae DB165 [QYRT]
23087
23013
-
Ile
GAT
[ENA]
¡û
>W1810091064
PGGU01000016
Actinomycetota
Microbacterium aurantiacum Sa12 [PGGU]
363719
363793
+
Ile
GAT
[ENA]
¡û
>W1810168613
PJJJ01000030
Actinomycetota
Cryobacterium sp. Y82 [PJJJ]
134529
134603
+
Ile
GAT
[ENA]
¡û
>W1810168643
PJJK01000084
Actinomycetota
Cryobacterium sp. Y62 [PJJK]
19411
19337
-
Ile
GAT
[ENA]
¡û
>W1810168844
PJJO01000059
Actinomycetota
Cryobacterium sp. Y11 [PJJO]
49796
49722
-
Ile
GAT
[ENA]
¡û
>W1810277243
PSTR01000006
Actinomycetota
Clavibacter michiganensis AY1B2 [PSTR]
70407
70331
-
Ile
GAT
[ENA]
¡û
>W1810277279
PSTS01000006
Actinomycetota
Clavibacter michiganensis AY1A6 [PSTS]
66690
66614
-
Ile
GAT
[ENA]
¡û
>W1810277338
PSTT01000094
Actinomycetota
Subtercola sp. Z020 [PSTT]
22261
22186
-
Ile
GAT
[ENA]
¡û
>W1810277394
PSTV01000001
Actinomycetota
Clavibacter michiganensis Z002 [PSTV]
319401
319477
+
Ile
GAT
[ENA]
¡û
>W1810277484
PSTW01000030
Actinomycetota
Clavibacter michiganensis Z001 [PSTW]
343884
343960
+
Ile
GAT
[ENA]
¡û
>W1810282066
PSXY01000003
Actinomycetota
Clavibacter michiganensis AY1B3 [PSXY]
181102
181178
+
Ile
GAT
[ENA]
¡û
>W1810364708
PVTL01000005
Actinomycetota
Glaciihabitans tibetensis CGMCC 1.12484 [PVTL]
137021
136947
-
Ile
GAT
[ENA]
¡û
>W1810860773
QTTK01000001
Actinomycetota
Clavibacter sp. 199 [QTTK]
1108585
1108509
-
Ile
GAT
[ENA]
¡û
>C151075627
CP011043
Actinomycetota
Clavibacter michiganensis subsp. insidiosus R1-1 [CP011043]
11230
11306
+
Ile
GAT
[Ensembl]
¡û
>C151095688
CP012573
Actinomycetota
Clavibacter capsici PF008 [CP012573]
11243
11319
+
Ile
GAT
-
¡û
>W2010929785
MZMM01000001
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-Cs3N [MZMM]
2210321
2210397
+
Ile
GAT
[ENA]
¡û
>W2010929824
MZMN01000003
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus CFIA-CsR14 [MZMN]
1802191
1802267
+
Ile
GAT
[ENA]
¡û
>W2010929897
MZMO01000001
Actinomycetota
Clavibacter michiganensis subsp. insidiosus LMG 3663 [MZMO]
235688
235612
-
Ile
GAT
[ENA]
¡û
>W2010929938
MZMP01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis LMG 7333 [MZMP]
1055437
1055361
-
Ile
GAT
[ENA]
¡û
>W2010929981
MZMQ01000001
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [MZMQ]
1150864
1150788
-
Ile
GAT
[ENA]
¡û
>W2010936222
NBWZ01000001
Actinomycetota
Subtercola boreus K300 [NBWZ]
10826
10901
+
Ile
GAT
[ENA]
¡û
>W2010936266
NBXA01000001
Actinomycetota
Subtercola boreus P27444 [NBXA]
77157
77232
+
Ile
GAT
[ENA]
¡û
>W2010936310
NBXB01000001
Actinomycetota
Subtercola boreus P27479 [NBXB]
78841
78916
+
Ile
GAT
[ENA]
¡û
>W2010936356
NBXC01000002
Actinomycetota
Subtercola boreus P27924 [NBXC]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W2010936399
NBXD01000002
Actinomycetota
Subtercola boreus P27979 [NBXD]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W2010936442
NBXE01000002
Actinomycetota
Subtercola boreus P28004 [NBXE]
125812
125888
+
Ile
GAT
[ENA]
¡û
>W2011269846
QLML01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP6885 [QLML]
28507
28431
-
Ile
GAT
[ENA]
¡û
>W2011269874
QLMM01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7314 [QLMM]
27831
27755
-
Ile
GAT
[ENA]
¡û
>W2011269929
QLMN01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7315 [QLMN]
28507
28431
-
Ile
GAT
[ENA]
¡û
>W2011269958
QLMO01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7316 [QLMO]
27831
27755
-
Ile
GAT
[ENA]
¡û
>W2011270023
QLMP01000017
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7488 [QLMP]
28498
28422
-
Ile
GAT
[ENA]
¡û
>W2011270059
QLMQ01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7568 [QLMQ]
27828
27752
-
Ile
GAT
[ENA]
¡û
>W2011270106
QLMR01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7589 [QLMR]
28507
28431
-
Ile
GAT
[ENA]
¡û
>W2011270134
QLMS01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ1811 [QLMS]
46024
46100
+
Ile
GAT
[ENA]
¡û
>W2011270175
QLMT01000006
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ5026 [QLMT]
46059
46135
+
Ile
GAT
[ENA]
¡û
>W2011270252
QLMU01000015
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 14456 [QLMU]
46052
46128
+
Ile
GAT
[ENA]
¡û
>W2011270287
QLMV01000012
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1465 [QLMV]
27828
27752
-
Ile
GAT
[ENA]
¡û
>W2011270308
QLMW01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP1940 [QLMW]
28504
28428
-
Ile
GAT
[ENA]
¡û
>W2011270350
QLMX01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ATCC 10202 [QLMX]
15140
15064
-
Ile
GAT
[ENA]
¡û
>W2011270427
QLMY01000009
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2494 [QLMY]
139722
139798
+
Ile
GAT
[ENA]
¡û
>W2011270439
QLMZ01000005
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP2500 [QLMZ]
16795
16719
-
Ile
GAT
[ENA]
¡û
>W2011270499
QLNA01000021
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP5842 [QLNA]
35059
35135
+
Ile
GAT
[ENA]
¡û
>W2011270558
QLNB01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7158 [QLNB]
28959
28883
-
Ile
GAT
[ENA]
¡û
>W2011270586
QLNC01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7311 [QLNC]
269568
269644
+
Ile
GAT
[ENA]
¡û
>W2011270621
QLND01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP7312 [QLND]
273625
273701
+
Ile
GAT
[ENA]
¡û
>W2011270657
QLNE01000004
Actinomycetota
Clavibacter michiganensis subsp. michiganensis ARZ28 [QLNE]
35708
35784
+
Ile
GAT
[ENA]
¡û
>W2011279202
QODA01000006
Actinomycetota
Clavibacter michiganensis subsp. michiganensis NZ2541 [QODA]
16835
16759
-
Ile
GAT
[ENA]
¡û
>W2011316476
QWDZ01000006
Actinomycetota
Clavibacter insidiosus CFBP 1195 [QWDZ]
20276
20352
+
Ile
GAT
[ENA]
¡û
>W2011316512
QWEA01000001
Actinomycetota
Clavibacter insidiosus CFBP 6488 [QWEA]
20020
20096
+
Ile
GAT
[ENA]
¡û
>W2011316555
QWEB01000009
Actinomycetota
Clavibacter michiganensis CFBP 7491 [QWEB]
24894
24970
+
Ile
GAT
[ENA]
¡û
>W2011316599
QWEC01000005
Actinomycetota
Clavibacter michiganensis CFBP 7493 [QWEC]
7899
7823
-
Ile
GAT
[ENA]
¡û
>W2011316642
QWED01000001
Actinomycetota
Clavibacter nebraskensis CFBP 7577 [QWED]
26191
26267
+
Ile
GAT
[ENA]
¡û
>W2011316685
QWEE01000005
Actinomycetota
Clavibacter michiganensis subsp. californiensis CFBP 8216 [QWEE]
3172
3096
-
Ile
GAT
[ENA]
¡û
>W2011318805
QWGS01000003
Actinomycetota
Clavibacter michiganensis subsp. chilensis CFBP 8217 [QWGS]
24376
24452
+
Ile
GAT
[ENA]
¡û
>W2011318850
QWGT01000002
Actinomycetota
Clavibacter sp. CFBP 8615 [QWGT]
6956
6880
-
Ile
GAT
[ENA]
¡û
>W2011318893
QWGU01000003
Actinomycetota
Clavibacter sp. CFBP 8616 [QWGU]
6946
6870
-
Ile
GAT
[ENA]
¡û
>W2011318935
QWGV01000001
Actinomycetota
Clavibacter michiganensis subsp. phaseoli CFBP 8627 [QWGV]
24402
24478
+
Ile
GAT
[ENA]
¡û
>W2011343527
QYRT01000001
Actinomycetota
Subtercola vilae DB165 [QYRT]
23087
23013
-
Ile
GAT
[ENA]
¡û
>W2011410827
RDQV01000004
Actinomycetota
Clavibacter michiganensis subsp. insidiosus CFBP 2404 [RDQV]
23635
23559
-
Ile
GAT
[ENA]
¡û
>W2011410873
RDQW01000002
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CFBP 4999 [RDQW]
28563
28487
-
Ile
GAT
[ENA]
¡û
>W2012020549
VFOO01000001
Actinomycetota
Subtercola boreus DSM 13056 [VFOO]
3150685
3150610
-
Ile
GAT
[ENA]
¡û
>W2012433287
WTCS01000001
Actinomycetota
Clavibacter michiganensis subsp. michiganensis OP3 [WTCS]
11221
11297
+
Ile
GAT
[ENA]
¡û
>W2110018986
BMCM01000001
Actinomycetota
Microbacterium murale CCM 7640 [BMCM]
897520
897594
+
Ile
GAT
[ENA]
¡û
>W2110023502
BMGB01000001
Actinomycetota
Conyzicola nivalis CGMCC 1.12813 [BMGB]
2427297
2427223
-
Ile
GAT
[ENA]
¡û
>W2110024110
BMGP01000006
Actinomycetota
Subtercola lobariae CGMCC 1.12976 [BMGP]
213657
213583
-
Ile
GAT
[ENA]
¡û
>W2110159676
JAATPM010000017
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 1217 [JAATPM]
6873
6797
-
Ile
GAT
[ENA]
¡û
>W2110176931
JABFAR010000145
Actinomycetota
Microbacterium sp. KRD174 [JABFAR]
24526
24452
-
Ile
GAT
[ENA]
¡û
>W2110176974
JABFAS010000002
Actinomycetota
Microbacterium sp. KRD172 [JABFAS]
240630
240556
-
Ile
GAT
[ENA]
¡û
>W2110201602
JACDTW010000005
Actinomycetota
Subtercola lobariae 9583b [JACDTW]
176772
176846
+
Ile
GAT
[ENA]
¡û
>W2110328874
JADKRO010000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VKM Ac-1790 [JADKRO]
442716
442792
+
Ile
GAT
[ENA]
¡û
>W2110328904
JADKRP010000001
Actinomycetota
Clavibacter michiganensis subsp. phaseoli VKM Ac-2886 [JADKRP]
1818723
1818647
-
Ile
GAT
[ENA]
¡û
>W2110328966
JADKRQ010000002
Actinomycetota
Clavibacter sp. VKM Ac-2542 [JADKRQ]
744707
744631
-
Ile
GAT
[ENA]
¡û
>W2110329008
JADKRR010000002
Actinomycetota
Clavibacter sp. VKM Ac-2872 [JADKRR]
447259
447335
+
Ile
GAT
[ENA]
¡û
>W2110329056
JADKRS010000002
Actinomycetota
Clavibacter sp. VKM Ac-2873 [JADKRS]
88282
88206
-
Ile
GAT
[ENA]
¡û
>W2110457662
JAFBBI010000001
Actinomycetota
Clavibacter michiganensis PvP097 [JAFBBI]
37166
37090
-
Ile
GAT
[ENA]
¡û
>W2110457681
JAFBBJ010000001
Actinomycetota
Clavibacter michiganensis PvP098 [JAFBBJ]
2217922
2217998
+
Ile
GAT
[ENA]
¡û
>W2110458157
JAFBBU010000001
Actinomycetota
Subtercola frigoramans DSM 13057 [JAFBBU]
3679576
3679502
-
Ile
GAT
[ENA]
¡û
>W2110491969
JAFEUE010000062
Actinomycetota
Clavibacter zhangzhiyongii DM3 [JAFEUE]
17448
17524
+
Ile
GAT
[ENA]
¡û
>W2110554396
JAGIOV010000001
Actinomycetota
Clavibacter michiganensis PvP036 [JAGIOV]
443742
443818
+
Ile
GAT
[ENA]
¡û
>W2110574505
JAGTTN010000003
Actinomycetota
Microbacterium sp. BWT-G7 [JAGTTN]
383385
383459
+
Ile
GAT
[ENA]
¡û
>W2110599790
JAHEWV010000006
Actinomycetota
Clavibacter michiganensis CFBP 3399 [JAHEWV]
79209
79285
+
Ile
GAT
[ENA]
¡û
>C201055717
CP033723
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 61-1 [CP033723]
11216
11292
+
Ile
GAT
-
¡û
>W2110692820
JAIQDX010000004
Actinomycetota
Microbacterium sp. cx-55 [JAIQDX]
160158
160234
+
Ile
GAT
[ENA]
¡û
>C211144329
CP061274
Actinomycetota
Clavibacter sp. DM1 [CP061274]
11237
11313
+
Ile
GAT
-
¡û
>C211344353
CP076349
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ28 [CP076349]
11221
11297
+
Ile
GAT
-
¡û
>C211344397
CP076352
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VQ143 [CP076352]
11221
11297
+
Ile
GAT
-
¡û
>C211346896
CP076547
Actinomycetota
Subtercola sp. PAMC28395 [CP076547]
974073
974147
+
Ile
GAT
-
¡û
>C231046730
CP040786
Actinomycetota
Clavibacter phaseoli LPPA 982 [CP040786]
2786766
2786690
-
Ile
GAT
-
¡û
>C231046770
CP040788
Actinomycetota
Clavibacter michiganensis subsp. tessellarius ATCC 33566 [CP040788]
2411332
2411408
+
Ile
GAT
-
¡û
>C231046797
CP040792
Actinomycetota
Clavibacter californiensis CFBP 8216 [CP040792]
417700
417776
+
Ile
GAT
-
¡û
>C231046862
CP040795
Actinomycetota
Clavibacter phaseoli CFBP 8217 [CP040795]
2910773
2910697
-
Ile
GAT
-
¡û
>C231046908
CP040797
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis A6096 [CP040797]
2044123
2044047
-
Ile
GAT
-
¡û
>C231064316
CP053437
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A5747* [CP053437]
407516
407440
-
Ile
GAT
-
¡û
>C231065148
CP053860
Actinomycetota
Clavibacter michiganensis subsp. michiganensis A4758 [CP053860]
1190652
1190576
-
Ile
GAT
-
¡û
>C231166294
CP080437
Actinomycetota
Clavibacter michiganensis LMG7333 [CP080437]
2306623
2306699
+
Ile
GAT
-
¡û
>C231180637
CP083439
Actinomycetota
Clavibacter sp. A6099 [CP083439]
11221
11297
+
Ile
GAT
-
¡û
>C231203701
CP085106
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM84 [CP085106]
11222
11298
+
Ile
GAT
-
¡û
>C231203945
CP085137
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM09 [CP085137]
11222
11298
+
Ile
GAT
-
¡û
>C231203989
CP085140
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM39 [CP085140]
11222
11298
+
Ile
GAT
-
¡û
>C231226822
CP086345
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CNK-2 [CP086345]
11216
11292
+
Ile
GAT
-
¡û
>C231226866
CP086346
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 44 [CP086346]
11222
11298
+
Ile
GAT
-
¡û
>C231226910
CP086348
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis SL1 [CP086348]
11216
11292
+
Ile
GAT
-
¡û
>C231226954
CP086349
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis CIBA [CP086349]
11216
11292
+
Ile
GAT
-
¡û
>C231226998
CP086350
Actinomycetota
Clavibacter michiganensis subsp. nebraskensis 419B [CP086350]
11222
11298
+
Ile
GAT
-
¡û
>C231252206
CP088261
Actinomycetota
Microbacterium sp. cx-55 [CP088261]
10093
10169
+
Ile
GAT
-
¡û
>C231252379
CP088266
Actinomycetota
Clavibacter michiganensis subsp. sepedonicus K496 [CP088266]
12281
12357
+
Ile
GAT
-
¡û
>C231291496
CP091139
Actinomycetota
Microbacterium sp. KUDC0405 [CP091139]
1905656
1905730
+
Ile
GAT
-
¡û
>C231359398
CP095274
Actinomycetota
Clavibacter michiganensis subsp. michiganensis N.P. [CP095274]
11221
11297
+
Ile
GAT
-
¡û
>W2110768348
SISU01000003
Actinomycetota
Clavibacter michiganensis subsp. michiganensis 0317 [SISU]
28805
28729
-
Ile
GAT
[ENA]
¡û
>C231601422
CP117773
Actinomycetota
Clavibacter michiganensis subsp. michiganensis CMM04 [CP117773]
11222
11298
+
Ile
GAT
-
¡û
>C231601466
CP117776
Actinomycetota
Clavibacter michiganensis subsp. michiganensis Cmm_21 [CP117776]
11222
11298
+
Ile
GAT
-
¡û
>C241040243
CP033721
Actinomycetota
Clavibacter nebraskensis HF4 [CP033721]
11216
11292
+
Ile
GAT
-
¡û
>C241040287
CP033722
Actinomycetota
Clavibacter nebraskensis 7580 [CP033722]
11216
11292
+
Ile
GAT
-
¡û
>C241040331
CP033724
Actinomycetota
Clavibacter michiganensis subsp. michiganensis UF1 [CP033724]
11222
11298
+
Ile
GAT
-
¡û
>C241115361
CP047051
Actinomycetota
Clavibacter michiganensis subsp. michiganensis MSF322 [CP047051]
11221
11297
+
Ile
GAT
-
¡û
>C241115405
CP047054
Actinomycetota
Clavibacter michiganensis subsp. michiganensis VL527 [CP047054]
11222
11298
+
Ile
GAT
-
¡û
>C241127468
CP048045
Actinomycetota
Clavibacter capsici 1207 [CP048045]
11243
11319
+
Ile
GAT
-
¡û
>C241127511
CP048047
Actinomycetota
Clavibacter capsici 1106 [CP048047]
11243
11319
+
Ile
GAT
-
¡û
>C241127555
CP048049
Actinomycetota
Clavibacter capsici 1101 [CP048049]
11243
11319
+
Ile
GAT
-
¡û
>W1511313225
JPSY01000001
Actinomycetota
Microbacterium profundi Shh49 [JPSY]
1503293
1503219
-
Ile
GAT
[ENA]
¡û
>W1511352429
JROD01000002
Actinomycetota
Clavibacter michiganensis CF11 [JROD]
40982
40906
-
Ile
GAT
[ENA]
¡û
>W1511570112
LAKL01000028
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis DOAB 397 [LAKL]
83029
83105
+
Ile
GAT
[ENA]
¡û
>C131019520
HE614873
Actinomycetota
Clavibacter nebraskensis NCPPB 2581 type strain: NCPPB 2581 [HE614873]
11216
11292
+
Ile
GAT
[Ensembl]
¡û
>W1610867024
LQXA01000019
Actinomycetota
Clavibacter michiganensis subsp. tessellarius [LQXA]
65734
65658
-
Ile
GAT
[ENA]
¡û
>W1610918523
LSOE01000011
Actinomycetota
Clavibacter nebraskensis subsp. nebraskensis [LSOE]
135665
135741
+
Ile
GAT
[ENA]
¡û
>W1710604673
FVZG01000002
Actinomycetota
Clavibacter michiganensis [FVZG]
27799
27723
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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