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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.158847 (5 seq.)
>W131214920
ATUO01000154
Gammaproteobacteria
Psychromonas hadalis ATCC BAA-638 [ATUO]
174
98
-
Pro
GGG
[ENA]
¡û
>w015495
AAPG01000002
Gammaproteobacteria
Psychromonas sp. CNPT3 [AAPG]
62080
62002
-
Pro
GGG
[ENA]
¡û
>W1910871974
NDFH01000003
Gammaproteobacteria
Psychromonas sp. CD1 [NDFH]
1051577
1051501
-
Pro
GGG
[ENA]
¡û
>W2010940677
NDFH01000003
Gammaproteobacteria
Psychromonas sp. CD1 [NDFH]
1051577
1051501
-
Pro
GGG
[ENA]
¡û
>C131013845
CP004404
Gammaproteobacteria
Psychromonas sp. CNPT3 [CP004404]
2516879
2516803
-
Pro
GGG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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