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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.158966 (247 seq.)
>W1711168307
LVXY01000005
Betaproteobacteria
Cupriavidus gilardii [LVXY]
406283
406207
-
Arg
TCT
[ENA]
¡û
>W131059191
ANGE01000267
Betaproteobacteria
Bordetella holmesii 44057 [ANGE]
160
236
+
Arg
TCT
[ENA]
¡û
>W131089852
AOEW01000002
Betaproteobacteria
Bordetella holmesii F627 [AOEW]
102121
102045
-
Arg
TCT
[ENA]
¡û
>W131090156
AOFR01000006
Betaproteobacteria
Bordetella holmesii H558 [AOFR]
109502
109426
-
Arg
TCT
[ENA]
¡û
>W131043717
AMPR01000365
Betaproteobacteria
Cupriavidus sp. HPC(L) [AMPR]
1433
1357
-
Arg
TCT
[ENA]
¡û
>W1712110597
NJIX01000009
Betaproteobacteria
Achromobacter sp. HZ34 [NJIX]
217562
217486
-
Arg
TCT
[ENA]
¡û
>W1712110637
NJIY01000011
Betaproteobacteria
Achromobacter sp. HZ28 [NJIY]
217499
217423
-
Arg
TCT
[ENA]
¡û
>C171016582
CP012334
Betaproteobacteria
Bordetella sp. H567 [CP012334]
1406903
1406979
+
Arg
TCT
-
¡û
>C171047652
CP016341
Betaproteobacteria
Bordetella holmesii H903 [CP016341]
2483614
2483538
-
Arg
TCT
-
¡û
>C171115725
CP021108
Betaproteobacteria
Bordetella genomosp. 8 AU19157 [CP021108]
1509984
1510060
+
Arg
TCT
-
¡û
>C171115800
CP021109
Betaproteobacteria
Bordetella genomosp. 9 AU17164 [CP021109]
3463260
3463184
-
Arg
TCT
-
¡û
>C171115847
CP021110
Betaproteobacteria
Bordetella genomosp. 9 AU14267 [CP021110]
3346964
3346888
-
Arg
TCT
-
¡û
>C171115897
CP021111
Betaproteobacteria
Bordetella genomosp. 13 AU7206 [CP021111]
2707795
2707719
-
Arg
TCT
-
¡û
>W131156211
AQPL01000141
Betaproteobacteria
Cupriavidus sp. WS [AQPL]
35158
35234
+
Arg
TCT
[ENA]
¡û
>W131180677
ARNH01000003
Betaproteobacteria
Bordetella sp. FB-8 [ARNH]
926609
926685
+
Arg
TCT
[ENA]
¡û
>C001932
AM167904
Betaproteobacteria
Bordetella avium 197N [AM167904]
2815281
2815205
-
Arg
TCT
[Ensembl]
¡û
>C018766
CP000352
Betaproteobacteria
Cupriavidus metallidurans CH34 [CP000352]
2377999
2377926
-
Arg
TCT
[Ensembl]
¡û
>WENV180026654
FTIU01010985
[FTIU] metagenome; soil
870
794
-
Arg
TCT
[ENA]
¡û
>WENV180029732
FTJL01002358
[FTJL] metagenome; soil
2209
2133
-
Arg
TCT
[ENA]
¡û
>W141139286
AWNL01000015
Betaproteobacteria
Bordetella trematum CCUG 13902 [AWNL]
12178
12102
-
Arg
TCT
[ENA]
¡û
>W141194220
AYSW01000006
Betaproteobacteria
Robbsia andropogonis Ba3549 [AYSW]
15306
15230
-
Arg
TCT
[ENA]
¡û
>C08001888
AM902716
Betaproteobacteria
Bordetella petrii DSM 12804 [AM902716]
3683557
3683484
-
Arg
TCT
[Ensembl]
¡û
>W141277451
JAEP01000006
Betaproteobacteria
Bordetella petrii J51 [JAEP]
388098
388174
+
Arg
TCT
[ENA]
¡û
>W141383364
JDFP01000003
Betaproteobacteria
Bordetella holmesii 30539 [JDFP]
117732
117656
-
Arg
TCT
[ENA]
¡û
>W141400693
JDSC01000002
Betaproteobacteria
Bordetella holmesii 41130 [JDSC]
92269
92193
-
Arg
TCT
[ENA]
¡û
>W141400897
JDSJ01000004
Betaproteobacteria
Bordetella holmesii 70147 [JDSJ]
839195
839119
-
Arg
TCT
[ENA]
¡û
>W141400919
JDSK01000001
Betaproteobacteria
Bordetella holmesii 35009 [JDSK]
107827
107751
-
Arg
TCT
[ENA]
¡û
>W141401953
JDTF01000004
Betaproteobacteria
Bordetella holmesii 1058 [JDTF]
1801249
1801173
-
Arg
TCT
[ENA]
¡û
>WENV170726578
LSQX01386590
[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
1504
1428
-
Arg
TCT
[ENA]
¡û
>W141463892
JFJV02000035
Betaproteobacteria
Cupriavidus sp. SK-3 [JFJV]
10696
10620
-
Arg
TCT
[ENA]
¡û
>WENV170965378
MTEU01001602
[MTEU] soil metagenome; naturally attenuated soil
9356
9432
+
Arg
TCT
[ENA]
¡û
>WENV170965910
MTEV01009421
[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
895
819
-
Arg
TCT
[ENA]
¡û
>WENV170966194
MTEX01003767
[MTEX] soil metagenome; soil biostimulated with molasses as carbon source
158
82
-
Arg
TCT
[ENA]
¡û
>W141485139
JFZD01000072
Betaproteobacteria
Cupriavidus metallidurans [JFZD]
47712
47638
-
Arg
TCT
[ENA]
¡û
>W141486023
JFZY01000002
Betaproteobacteria
Bordetella holmesii CDC-H572-BH [JFZY]
867
943
+
Arg
TCT
[ENA]
¡û
>W141486086
JFZZ01000054
Betaproteobacteria
Bordetella holmesii CDC-H585-BH [JFZZ]
2090
2014
-
Arg
TCT
[ENA]
¡û
>W141486163
JGAA01000172
Betaproteobacteria
Bordetella holmesii CDC-H635-BH [JGAA]
2079
2003
-
Arg
TCT
[ENA]
¡û
>C181033928
CP018890
Betaproteobacteria
Bordetella holmesii [CP018890]
2479809
2479733
-
Arg
TCT
-
¡û
>C181033982
CP018891
Betaproteobacteria
Bordetella holmesii [CP018891]
2480807
2480731
-
Arg
TCT
-
¡û
>C181034035
CP018892
Betaproteobacteria
Bordetella holmesii [CP018892]
2489803
2489727
-
Arg
TCT
-
¡û
>C181034090
CP018893
Betaproteobacteria
Bordetella holmesii [CP018893]
2488805
2488729
-
Arg
TCT
-
¡û
>C181034144
CP018894
Betaproteobacteria
Bordetella holmesii [CP018894]
2487718
2487642
-
Arg
TCT
-
¡û
>C181034195
CP018895
Betaproteobacteria
Bordetella holmesii [CP018895]
2485659
2485583
-
Arg
TCT
-
¡û
>C181034252
CP018896
Betaproteobacteria
Bordetella holmesii [CP018896]
2478027
2477951
-
Arg
TCT
-
¡û
>C181034359
CP018898
Betaproteobacteria
Bordetella trematum [CP018898]
3145235
3145159
-
Arg
TCT
-
¡û
>C181034421
CP018899
Betaproteobacteria
Bordetella holmesii [CP018899]
2485642
2485566
-
Arg
TCT
-
¡û
>C181045604
CP020647
Betaproteobacteria
Bordetella holmesii F028 [CP020647]
2486912
2486836
-
Arg
TCT
-
¡û
>C181045922
CP020653
Betaproteobacteria
Bordetella holmesii C690 [CP020653]
2487534
2487458
-
Arg
TCT
-
¡û
>C191012248
CP016340
Betaproteobacteria
Bordetella trematum F581 [CP016340]
3282332
3282256
-
Arg
TCT
-
¡û
>C191017129
CP019933
Betaproteobacteria
Bordetella holmesii F274 [CP019933]
1117157
1117233
+
Arg
TCT
-
¡û
>C191035878
CP025521
Betaproteobacteria
Bordetella avium Owl19 [CP025521]
2828780
2828704
-
Arg
TCT
-
¡û
>C191035937
CP025522
Betaproteobacteria
Bordetella avium JBBA [CP025522]
2841310
2841234
-
Arg
TCT
-
¡û
>W141520685
JGVZ01000196
Betaproteobacteria
Bordetella holmesii CDC-H629-BH [JGVZ]
143
219
+
Arg
TCT
[ENA]
¡û
>W141520733
JGWA01000144
Betaproteobacteria
Bordetella holmesii CDC-H719-BH [JGWA]
2056
1980
-
Arg
TCT
[ENA]
¡û
>W141520741
JGWB01000024
Betaproteobacteria
Bordetella holmesii CDC-H785-BH [JGWB]
1348
1272
-
Arg
TCT
[ENA]
¡û
>W141520827
JGWC01000194
Betaproteobacteria
Bordetella holmesii 04P3421 [JGWC]
242
318
+
Arg
TCT
[ENA]
¡û
>W141520844
JGWD01000071
Betaproteobacteria
Bordetella holmesii CDC-H643-BH [JGWD]
1349
1273
-
Arg
TCT
[ENA]
¡û
>W141621674
JJNW01000108
Betaproteobacteria
Bordetella holmesii H620 [JJNW]
1330
1254
-
Arg
TCT
[ENA]
¡û
>W141697612
JMGZ01000023
Betaproteobacteria
Bordetella holmesii CDC-H809-BH [JMGZ]
2069
1993
-
Arg
TCT
[ENA]
¡û
>W09100036
AAAI03000007
Betaproteobacteria
Cupriavidus metallidurans CH34 [AAAI]
200353
200279
-
Arg
TCT
[ENA]
¡û
>W1910890596
NEVJ01000002
Betaproteobacteria
Bordetella genomosp. 9 AU21707 [NEVJ]
103991
104067
+
Arg
TCT
[ENA]
¡û
>W1910890718
NEVL01000004
Betaproteobacteria
Bordetella genomosp. 1 AU17610 [NEVL]
630466
630390
-
Arg
TCT
[ENA]
¡û
>W1910890787
NEVM01000005
Betaproteobacteria
Bordetella genomosp. 10 AU16122 [NEVM]
1263958
1263882
-
Arg
TCT
[ENA]
¡û
>W1910890832
NEVN01000009
Betaproteobacteria
Bordetella genomosp. 5 AU14646 [NEVN]
216647
216571
-
Arg
TCT
[ENA]
¡û
>W1910890874
NEVO01000012
Betaproteobacteria
Bordetella genomosp. 4 AU14378 [NEVO]
69245
69169
-
Arg
TCT
[ENA]
¡û
>W1910890926
NEVP01000011
Betaproteobacteria
Bordetella genomosp. 5 AU10456 [NEVP]
226916
226840
-
Arg
TCT
[ENA]
¡û
>W1910890960
NEVQ01000008
Betaproteobacteria
Bordetella genomosp. 4 AU9919 [NEVQ]
250227
250303
+
Arg
TCT
[ENA]
¡û
>W1910891048
NEVR01000006
Betaproteobacteria
Bordetella genomosp. 1 AU9795 [NEVR]
256225
256149
-
Arg
TCT
[ENA]
¡û
>W1910891066
NEVS01000002
Betaproteobacteria
Bordetella genomosp. 11 AU8856 [NEVS]
207835
207911
+
Arg
TCT
[ENA]
¡û
>W1910891127
NEVT01000006
Betaproteobacteria
Bordetella genomosp. 2 AU8256 [NEVT]
1290612
1290536
-
Arg
TCT
[ENA]
¡û
>W1910891195
NEVU01000003
Betaproteobacteria
Bordetella genomosp. 12 AU6712 [NEVU]
808881
808805
-
Arg
TCT
[ENA]
¡û
>W1911641141
PYAL01000006
Betaproteobacteria
Achromobacter aloeverae AVA-1 [PYAL]
468681
468757
+
Arg
TCT
[ENA]
¡û
>W1911746145
QVSL01000004
Betaproteobacteria
Bordetella avium BA1 [QVSL]
159962
160038
+
Arg
TCT
[ENA]
¡û
>W1911746203
QVSM01000006
Betaproteobacteria
Bordetella avium BA19 [QVSM]
113587
113511
-
Arg
TCT
[ENA]
¡û
>W1911746250
QVSN01000004
Betaproteobacteria
Bordetella avium BA18 [QVSN]
113591
113515
-
Arg
TCT
[ENA]
¡û
>W1911746309
QVSO01000005
Betaproteobacteria
Bordetella avium BA17 [QVSO]
240064
240140
+
Arg
TCT
[ENA]
¡û
>W1911746365
QVSP01000004
Betaproteobacteria
Bordetella avium BA16 [QVSP]
113633
113557
-
Arg
TCT
[ENA]
¡û
>W1911746426
QVSQ01000005
Betaproteobacteria
Bordetella avium BA15 [QVSQ]
113422
113346
-
Arg
TCT
[ENA]
¡û
>W1911746472
QVSR01000005
Betaproteobacteria
Bordetella avium BA14 [QVSR]
113631
113555
-
Arg
TCT
[ENA]
¡û
>W1911746530
QVSS01000005
Betaproteobacteria
Bordetella avium BA13 [QVSS]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W1911746587
QVST01000005
Betaproteobacteria
Bordetella avium BA12 [QVST]
113596
113520
-
Arg
TCT
[ENA]
¡û
>W1911746637
QVSU01000004
Betaproteobacteria
Bordetella avium BA11 [QVSU]
150695
150619
-
Arg
TCT
[ENA]
¡û
>W1911746695
QVSV01000004
Betaproteobacteria
Bordetella avium BA10 [QVSV]
113629
113553
-
Arg
TCT
[ENA]
¡û
>W1911746756
QVSW01000006
Betaproteobacteria
Bordetella avium ATCC 35086 [QVSW]
113631
113555
-
Arg
TCT
[ENA]
¡û
>W1911746810
QVSX01000005
Betaproteobacteria
Bordetella avium BA8 [QVSX]
113602
113526
-
Arg
TCT
[ENA]
¡û
>W1911746873
QVSY01000003
Betaproteobacteria
Bordetella avium BA6 [QVSY]
415480
415404
-
Arg
TCT
[ENA]
¡û
>W1911746923
QVSZ01000005
Betaproteobacteria
Bordetella avium BA5 [QVSZ]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W1911746978
QVTA01000004
Betaproteobacteria
Bordetella avium BA4 [QVTA]
113422
113346
-
Arg
TCT
[ENA]
¡û
>W1911747036
QVTB01000003
Betaproteobacteria
Bordetella avium BA3 [QVTB]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W1810596743
QGGT01000001
Betaproteobacteria
Cupriavidus plantarum SLV-132 [QGGT]
802490
802566
+
Arg
TCT
[ENA]
¡û
>W1810692841
QLKW01000006
Betaproteobacteria
Bordetella avium HAMBI_2160 [QLKW]
159804
159880
+
Arg
TCT
[ENA]
¡û
>W1810861211
QTTS01000001
Betaproteobacteria
Cupriavidus plantarum MA1-2za [QTTS]
1298663
1298587
-
Arg
TCT
[ENA]
¡û
>C151025416
CP007494
Betaproteobacteria
Bordetella holmesii ATCC 51541 [CP007494]
109126
109050
-
Arg
TCT
[Ensembl]
¡û
>C151025469
CP007495
Betaproteobacteria
Bordetella holmesii 44057 [CP007495]
109319
109243
-
Arg
TCT
[Ensembl]
¡û
>C151070022
CP010516
Betaproteobacteria
Cupriavidus gilardii CR3 [CP010516, CP010517]
2121969
2121893
-
Arg
TCT
-
¡û
>C151070662
CP010536
Betaproteobacteria
Cupriavidus basilensis 4G11 [CP010536, CP010537]
2891416
2891340
-
Arg
TCT
[Ensembl]
¡û
>W2010588011
JABBMS010000012
Betaproteobacteria
Bordetella trematum ZL0001 [JABBMS]
120796
120720
-
Arg
TCT
[ENA]
¡û
>W2010592063
JABEMD010000019
Betaproteobacteria
Cupriavidus gilardii ATCC 700815 [JABEMD]
59727
59803
+
Arg
TCT
[ENA]
¡û
>W2010592202
JABEMF010000015
Betaproteobacteria
Bordetella trematum ATCC 700309 [JABEMF]
110630
110554
-
Arg
TCT
[ENA]
¡û
>W2010633420
JABTYE010000012
Betaproteobacteria
Cupriavidus gilardii USM5 [JABTYE]
154984
155060
+
Arg
TCT
[ENA]
¡û
>W2010667499
JACBYU010000002
Betaproteobacteria
Cupriavidus plantarum MA2-19b [JACBYU]
819383
819459
+
Arg
TCT
[ENA]
¡û
>W2010674079
JACCEW010000006
Betaproteobacteria
Pusillimonas soli DSM 25264 [JACCEW]
161944
162018
+
Arg
TCT
[ENA]
¡û
>W2010802414
LZZU01000060
Betaproteobacteria
Cupriavidus sp. UME77 [LZZU]
158014
157938
-
Arg
TCT
[ENA]
¡û
>W2010955390
NEVJ01000002
Betaproteobacteria
Bordetella genomosp. 9 AU21707 [NEVJ]
103991
104067
+
Arg
TCT
[ENA]
¡û
>W2010955512
NEVL01000004
Betaproteobacteria
Bordetella genomosp. 1 AU17610 [NEVL]
630466
630390
-
Arg
TCT
[ENA]
¡û
>W2010955581
NEVM01000005
Betaproteobacteria
Bordetella genomosp. 10 AU16122 [NEVM]
1263958
1263882
-
Arg
TCT
[ENA]
¡û
>W2010955626
NEVN01000009
Betaproteobacteria
Bordetella genomosp. 5 AU14646 [NEVN]
216647
216571
-
Arg
TCT
[ENA]
¡û
>W2010955668
NEVO01000012
Betaproteobacteria
Bordetella genomosp. 4 AU14378 [NEVO]
69245
69169
-
Arg
TCT
[ENA]
¡û
>W2010955720
NEVP01000011
Betaproteobacteria
Bordetella genomosp. 5 AU10456 [NEVP]
226916
226840
-
Arg
TCT
[ENA]
¡û
>W2010955754
NEVQ01000008
Betaproteobacteria
Bordetella genomosp. 4 AU9919 [NEVQ]
250227
250303
+
Arg
TCT
[ENA]
¡û
>W2010955842
NEVR01000006
Betaproteobacteria
Bordetella genomosp. 1 AU9795 [NEVR]
256225
256149
-
Arg
TCT
[ENA]
¡û
>W2010955860
NEVS01000002
Betaproteobacteria
Bordetella genomosp. 11 AU8856 [NEVS]
207835
207911
+
Arg
TCT
[ENA]
¡û
>W2010955921
NEVT01000006
Betaproteobacteria
Bordetella genomosp. 2 AU8256 [NEVT]
1290612
1290536
-
Arg
TCT
[ENA]
¡û
>W2010955989
NEVU01000003
Betaproteobacteria
Bordetella genomosp. 12 AU6712 [NEVU]
808881
808805
-
Arg
TCT
[ENA]
¡û
>W2011231472
PYAL01000006
Betaproteobacteria
Achromobacter aloeverae AVA-1 [PYAL]
468681
468757
+
Arg
TCT
[ENA]
¡û
>W2011309451
QVSL01000004
Betaproteobacteria
Bordetella avium BA1 [QVSL]
159962
160038
+
Arg
TCT
[ENA]
¡û
>W2011309509
QVSM01000006
Betaproteobacteria
Bordetella avium BA19 [QVSM]
113587
113511
-
Arg
TCT
[ENA]
¡û
>W2011309556
QVSN01000004
Betaproteobacteria
Bordetella avium BA18 [QVSN]
113591
113515
-
Arg
TCT
[ENA]
¡û
>W2011309615
QVSO01000005
Betaproteobacteria
Bordetella avium BA17 [QVSO]
240064
240140
+
Arg
TCT
[ENA]
¡û
>W2011309671
QVSP01000004
Betaproteobacteria
Bordetella avium BA16 [QVSP]
113633
113557
-
Arg
TCT
[ENA]
¡û
>W2011309732
QVSQ01000005
Betaproteobacteria
Bordetella avium BA15 [QVSQ]
113422
113346
-
Arg
TCT
[ENA]
¡û
>W2011309778
QVSR01000005
Betaproteobacteria
Bordetella avium BA14 [QVSR]
113631
113555
-
Arg
TCT
[ENA]
¡û
>W2011309836
QVSS01000005
Betaproteobacteria
Bordetella avium BA13 [QVSS]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W2011309893
QVST01000005
Betaproteobacteria
Bordetella avium BA12 [QVST]
113596
113520
-
Arg
TCT
[ENA]
¡û
>W2011309943
QVSU01000004
Betaproteobacteria
Bordetella avium BA11 [QVSU]
150695
150619
-
Arg
TCT
[ENA]
¡û
>W2011310001
QVSV01000004
Betaproteobacteria
Bordetella avium BA10 [QVSV]
113629
113553
-
Arg
TCT
[ENA]
¡û
>W2011310062
QVSW01000006
Betaproteobacteria
Bordetella avium ATCC 35086 [QVSW]
113631
113555
-
Arg
TCT
[ENA]
¡û
>W2011310116
QVSX01000005
Betaproteobacteria
Bordetella avium BA8 [QVSX]
113602
113526
-
Arg
TCT
[ENA]
¡û
>W2011310179
QVSY01000003
Betaproteobacteria
Bordetella avium BA6 [QVSY]
415480
415404
-
Arg
TCT
[ENA]
¡û
>W2011310229
QVSZ01000005
Betaproteobacteria
Bordetella avium BA5 [QVSZ]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W2011310284
QVTA01000004
Betaproteobacteria
Bordetella avium BA4 [QVTA]
113422
113346
-
Arg
TCT
[ENA]
¡û
>W2011310342
QVTB01000003
Betaproteobacteria
Bordetella avium BA3 [QVTB]
113628
113552
-
Arg
TCT
[ENA]
¡û
>W2011393111
RCCX01000001
Betaproteobacteria
Cupriavidus plantarum MA1-4a [RCCX]
804762
804838
+
Arg
TCT
[ENA]
¡û
>W2011549959
SDQC01000006
Betaproteobacteria
Pusillimonas soli KCTC 22455 [SDQC]
126046
125972
-
Arg
TCT
[ENA]
¡û
>W2011699737
SUQM01000005
Betaproteobacteria
Cupriavidus basilensis UME74 [SUQM]
117936
117860
-
Arg
TCT
[ENA]
¡û
>W2011758760
UAQO01000011
Betaproteobacteria
Bordetella trematum NCTC13203 [UAQO]
125709
125633
-
Arg
TCT
[ENA]
¡û
>W2011815765
UFTG01000001
Betaproteobacteria
Bordetella avium NCTC12033 [UFTG]
933771
933847
+
Arg
TCT
[ENA]
¡û
>W2011816635
UFTX01000001
Betaproteobacteria
Bordetella holmesii NCTC12912 [UFTX]
3193785
3193709
-
Arg
TCT
[ENA]
¡û
>W2011817220
UFUJ01000001
Betaproteobacteria
Bordetella trematum NCTC12995 [UFUJ]
1157820
1157896
+
Arg
TCT
[ENA]
¡û
>W2012131731
VSRI01000012
Betaproteobacteria
Cupriavidus gilardii W2-2 [VSRI]
107927
107851
-
Arg
TCT
[ENA]
¡û
>W2012197444
VWRN01000023
Betaproteobacteria
Cupriavidus sp. MKL-01 [VWRN]
31425
31501
+
Arg
TCT
[ENA]
¡û
>W2012218067
VZOU01000001
Betaproteobacteria
Cupriavidus basilensis CCUG 49340 [VZOU]
350093
350169
+
Arg
TCT
[ENA]
¡û
>W2012218145
VZOV01000010
Betaproteobacteria
Cupriavidus gilardii CCUG 38401 [VZOV]
30102
30026
-
Arg
TCT
[ENA]
¡û
>W2012428901
WSJA01000019
Betaproteobacteria
Bordetella sp. 15P40C-2 [WSJA]
38623
38547
-
Arg
TCT
[ENA]
¡û
>W2012428961
WSJB01000021
Betaproteobacteria
Bordetella sp. 02P26C-1 [WSJB]
49021
49097
+
Arg
TCT
[ENA]
¡û
>W2110120099
CAJPUX010000011
Betaproteobacteria
Cupriavidus plantarum LMG 26296 [CAJPUX]
34962
35038
+
Arg
TCT
[ENA]
¡û
>W2110131129
CAJZAG010000023
Betaproteobacteria
Cupriavidus pampae LMG 32289 [CAJZAG]
5444
5520
+
Arg
TCT
[ENA]
¡û
>W2110518201
JAFNJF010000184
Betaproteobacteria
Bordetella holmesii CIDM-BH8 [JAFNJF]
1333
1257
-
Arg
TCT
[ENA]
¡û
>W2110518251
JAFNJG010000191
Betaproteobacteria
Bordetella holmesii CIDM-BH7 [JAFNJG]
1333
1257
-
Arg
TCT
[ENA]
¡û
>W2110518301
JAFNJH010000185
Betaproteobacteria
Bordetella holmesii CIDM-BH6 [JAFNJH]
146
222
+
Arg
TCT
[ENA]
¡û
>W2110518351
JAFNJI010000188
Betaproteobacteria
Bordetella holmesii CIDM-BH4 [JAFNJI]
146
222
+
Arg
TCT
[ENA]
¡û
>W2110518356
JAFNJJ010000005
Betaproteobacteria
Bordetella holmesii CIDM-BH2 [JAFNJJ]
1333
1257
-
Arg
TCT
[ENA]
¡û
>W2110518406
JAFNJK010000006
Betaproteobacteria
Bordetella holmesii CIDM-BH1 [JAFNJK]
1333
1257
-
Arg
TCT
[ENA]
¡û
>W2110534916
JAGFTW010000027
Betaproteobacteria
Cupriavidus gilardii Marseille CSURQ4897 [JAGFTW]
69100
69024
-
Arg
TCT
[ENA]
¡û
>W2110649665
JAHUWT010000005
Betaproteobacteria
Bordetella sp. BOR01 [JAHUWT]
137029
137105
+
Arg
TCT
[ENA]
¡û
>C201031765
CP019929
Betaproteobacteria
Bordetella avium 14-4061 [CP019929]
2840029
2839953
-
Arg
TCT
-
¡û
>C211058740
CP043142
Betaproteobacteria
Bordetella holmesii H558 [CP043142]
2486881
2486805
-
Arg
TCT
-
¡û
>C211166049
CP062803
Betaproteobacteria
Cupriavidus basilensis DSM 11853 [CP062803, CP062804]
2698380
2698304
-
Arg
TCT
-
¡û
>C211293869
CP071603
Betaproteobacteria
Bordetella holmesii CIDM-BH3 [CP071603]
1180702
1180778
+
Arg
TCT
-
¡û
>W2110711748
JAIZPL010000003
Betaproteobacteria
Cupriavidus sp. DB3 [JAIZPL]
858717
858641
-
Arg
TCT
[ENA]
¡û
>W1510015049
BBQM01000020
Betaproteobacteria
Cupriavidus basilensis KF708 [BBQM]
119348
119424
+
Arg
TCT
[ENA]
¡û
>C231165655
CP080293
Betaproteobacteria
Cupriavidus cauae PHS1 [CP080293, CP080294]
3010820
3010896
+
Arg
TCT
-
¡û
>C231219601
CP085973
Betaproteobacteria
Bordetella holmesii FDAARGOS_1539 [CP085973]
963237
963313
+
Arg
TCT
-
¡û
>C231490535
CP104386
Betaproteobacteria
Cupriavidus gilardii WM02 [CP104386, CP104387]
1517840
1517916
+
Arg
TCT
-
¡û
>W2110770839
UYIW01000002
Betaproteobacteria
Bordetella trematum NCTC13366 [UYIW]
16769
16845
+
Arg
TCT
[ENA]
¡û
>C241023419
CP019928
Betaproteobacteria
Bordetella avium SV1 [CP019928]
2729614
2729538
-
Arg
TCT
-
¡û
>C241023478
CP019930
Betaproteobacteria
Bordetella avium Ba002 [CP019930]
2774354
2774278
-
Arg
TCT
-
¡û
>C241072121
CP043066
Betaproteobacteria
Bordetella holmesii J712 [CP043066]
2486797
2486721
-
Arg
TCT
-
¡û
>C241072227
CP043068
Betaproteobacteria
Bordetella holmesii J708 [CP043068]
2486808
2486732
-
Arg
TCT
-
¡û
>C241072853
CP043080
Betaproteobacteria
Bordetella holmesii J312 [CP043080]
2485493
2485417
-
Arg
TCT
-
¡û
>C241073843
CP043101
Betaproteobacteria
Bordetella holmesii J168 [CP043101]
2486780
2486704
-
Arg
TCT
-
¡û
>C241074105
CP043106
Betaproteobacteria
Bordetella holmesii J102 [CP043106]
2485691
2485615
-
Arg
TCT
-
¡û
>C241074731
CP043118
Betaproteobacteria
Bordetella holmesii I265 [CP043118]
2483538
2483462
-
Arg
TCT
-
¡û
>C241074941
CP043122
Betaproteobacteria
Bordetella holmesii I100 [CP043122]
2486903
2486827
-
Arg
TCT
-
¡û
>C241074995
CP043123
Betaproteobacteria
Bordetella holmesii H869 [CP043123]
2486833
2486757
-
Arg
TCT
-
¡û
>C241075049
CP043124
Betaproteobacteria
Bordetella holmesii H863 [CP043124]
2486818
2486742
-
Arg
TCT
-
¡û
>C241075103
CP043125
Betaproteobacteria
Bordetella holmesii H862 [CP043125]
2486882
2486806
-
Arg
TCT
-
¡û
>C241075165
CP043126
Betaproteobacteria
Bordetella holmesii H809 [CP043126]
964299
964223
-
Arg
TCT
-
¡û
>C241075210
CP043127
Betaproteobacteria
Bordetella holmesii H808 [CP043127]
2486840
2486764
-
Arg
TCT
-
¡û
>C241075264
CP043128
Betaproteobacteria
Bordetella holmesii H807 [CP043128]
2485629
2485553
-
Arg
TCT
-
¡û
>C241075318
CP043129
Betaproteobacteria
Bordetella holmesii H719 [CP043129]
2487034
2486958
-
Arg
TCT
-
¡û
>C241075355
CP043130
Betaproteobacteria
Bordetella holmesii H716 [CP043130]
3426041
3426117
+
Arg
TCT
-
¡û
>C241075426
CP043131
Betaproteobacteria
Bordetella holmesii H713 [CP043131]
2486828
2486752
-
Arg
TCT
-
¡û
>C241075480
CP043132
Betaproteobacteria
Bordetella holmesii H641 [CP043132]
2486854
2486778
-
Arg
TCT
-
¡û
>C241075534
CP043133
Betaproteobacteria
Bordetella holmesii H635 [CP043133]
2483842
2483766
-
Arg
TCT
-
¡û
>C241075588
CP043134
Betaproteobacteria
Bordetella holmesii H629 [CP043134]
2486855
2486779
-
Arg
TCT
-
¡û
>C241075642
CP043135
Betaproteobacteria
Bordetella holmesii H628 [CP043135]
2486846
2486770
-
Arg
TCT
-
¡û
>C241075696
CP043136
Betaproteobacteria
Bordetella holmesii H620 [CP043136]
2486897
2486821
-
Arg
TCT
-
¡û
>C241075750
CP043137
Betaproteobacteria
Bordetella holmesii H619 [CP043137]
2487147
2487071
-
Arg
TCT
-
¡û
>C241075804
CP043138
Betaproteobacteria
Bordetella holmesii H610 [CP043138]
2483850
2483774
-
Arg
TCT
-
¡û
>C241075962
CP043141
Betaproteobacteria
Bordetella holmesii H572 [CP043141]
2486858
2486782
-
Arg
TCT
-
¡û
>C241076016
CP043143
Betaproteobacteria
Bordetella holmesii H557 [CP043143]
2486878
2486802
-
Arg
TCT
-
¡û
>C241076153
CP043146
Betaproteobacteria
Bordetella holmesii H401 [CP043146]
1323821
1323897
+
Arg
TCT
-
¡û
>C241076204
CP043147
Betaproteobacteria
Bordetella holmesii H400 [CP043147]
1163176
1163252
+
Arg
TCT
-
¡û
>C241076282
CP043148
Betaproteobacteria
Bordetella holmesii H387 [CP043148]
2486863
2486787
-
Arg
TCT
-
¡û
>C241076336
CP043149
Betaproteobacteria
Bordetella holmesii H385 [CP043149]
2486856
2486780
-
Arg
TCT
-
¡û
>C241076390
CP043150
Betaproteobacteria
Bordetella holmesii H370 [CP043150]
2487877
2487801
-
Arg
TCT
-
¡û
>C241076444
CP043151
Betaproteobacteria
Bordetella holmesii H359 [CP043151]
2485850
2485774
-
Arg
TCT
-
¡û
>C241076498
CP043152
Betaproteobacteria
Bordetella holmesii H336 [CP043152]
2487903
2487827
-
Arg
TCT
-
¡û
>C241076552
CP043153
Betaproteobacteria
Bordetella holmesii H319 [CP043153]
2484757
2484681
-
Arg
TCT
-
¡û
>C241076581
CP043154
Betaproteobacteria
Bordetella holmesii H318 [CP043154]
1117445
1117521
+
Arg
TCT
-
¡û
>C241076712
CP043156
Betaproteobacteria
Bordetella holmesii H250 [CP043156]
2485796
2485720
-
Arg
TCT
-
¡û
>C241076766
CP043157
Betaproteobacteria
Bordetella holmesii H249 [CP043157]
2485802
2485726
-
Arg
TCT
-
¡û
>C241076820
CP043158
Betaproteobacteria
Bordetella holmesii H248 [CP043158]
2485802
2485726
-
Arg
TCT
-
¡û
>C241076926
CP043160
Betaproteobacteria
Bordetella holmesii H108 [CP043160]
2487062
2486986
-
Arg
TCT
-
¡û
>C241077240
CP043166
Betaproteobacteria
Bordetella holmesii F595 [CP043166]
2486874
2486798
-
Arg
TCT
-
¡û
>C241077294
CP043167
Betaproteobacteria
Bordetella holmesii F594 [CP043167]
2487098
2487022
-
Arg
TCT
-
¡û
>C241077348
CP043168
Betaproteobacteria
Bordetella holmesii F593 [CP043168]
2486799
2486723
-
Arg
TCT
-
¡û
>C241077402
CP043169
Betaproteobacteria
Bordetella holmesii F592 [CP043169]
2486836
2486760
-
Arg
TCT
-
¡û
>C241077456
CP043170
Betaproteobacteria
Bordetella holmesii F590 [CP043170]
2487098
2487022
-
Arg
TCT
-
¡û
>C241077489
CP043171
Betaproteobacteria
Bordetella holmesii F589 [CP043171]
1323539
1323615
+
Arg
TCT
-
¡û
>C241077564
CP043172
Betaproteobacteria
Bordetella holmesii F588 [CP043172]
2487093
2487017
-
Arg
TCT
-
¡û
>C241077614
CP043173
Betaproteobacteria
Bordetella holmesii F586 [CP043173]
2487275
2487199
-
Arg
TCT
-
¡û
>C241077647
CP043174
Betaproteobacteria
Bordetella holmesii F061 [CP043174]
1116142
1116218
+
Arg
TCT
-
¡û
>C241077726
CP043175
Betaproteobacteria
Bordetella holmesii F029 [CP043175]
2486914
2486838
-
Arg
TCT
-
¡û
>C241077780
CP043176
Betaproteobacteria
Bordetella holmesii D130 [CP043176]
2490284
2490208
-
Arg
TCT
-
¡û
>C241085251
CP044065
Betaproteobacteria
Cupriavidus pauculus FDAARGOS_664 [CP044065, CP044067]
750399
750475
+
Arg
TCT
-
¡û
>C241108101
CP046331
Betaproteobacteria
Cupriavidus metallidurans FDAARGOS_675 [CP046331]
2984662
2984736
+
Arg
TCT
-
¡û
>C241139985
CP049957
Betaproteobacteria
Bordetella trematum E202 [CP049957]
3157043
3156967
-
Arg
TCT
-
¡û
>W2110784481
WMBV01000018
Betaproteobacteria
Bordetella petrii BT 1 9.2 [WMBV]
34810
34886
+
Arg
TCT
[ENA]
¡û
>C241152602
CP052849
Betaproteobacteria
Bordetella holmesii J790 [CP052849]
2487097
2487021
-
Arg
TCT
-
¡û
>C241152760
CP052852
Betaproteobacteria
Bordetella holmesii J862 [CP052852]
2488997
2488921
-
Arg
TCT
-
¡û
>C241167954
CP054626
Betaproteobacteria
Cupriavidus gilardii FDAARGOS_639 [CP054624, CP054626]
1994328
1994252
-
Arg
TCT
-
¡û
>C241346652
CP139170
Betaproteobacteria
Robbsia andropogonis BLB1 [CP139164, CP139166, CP139170]
2649467
2649391
-
Arg
TCT
-
¡û
>C241352732
CP139969
Betaproteobacteria
Bordetella avium HAMBI_2160 [CP139969]
933771
933847
+
Arg
TCT
-
¡û
>W1511310820
JPQP01000006
Betaproteobacteria
Bordetella trematum HR18 [JPQP]
4734
4810
+
Arg
TCT
[ENA]
¡û
>W1511484081
JWMK01000017
Betaproteobacteria
Bordetella avium Nh1210 [JWMK]
107679
107755
+
Arg
TCT
[ENA]
¡û
>W1511534662
JYOD01000041
Betaproteobacteria
Burkholderiaceae bacterium 16 [JYOD]
46552
46476
-
Arg
TCT
[ENA]
¡û
>W1511577559
LAQU01000006
Betaproteobacteria
Robbsia andropogonis ICMP2807 [LAQU]
137417
137341
-
Arg
TCT
[ENA]
¡û
>C161005257
CP007158
Betaproteobacteria
Bordetella holmesii H558 [CP007158]
97762
97686
-
Arg
TCT
-
¡û
>C161005311
CP007159
Betaproteobacteria
Bordetella holmesii F627 [CP007159]
109017
108941
-
Arg
TCT
-
¡û
>C161051095
CP013111
Betaproteobacteria
Bordetella sp. N [CP013111]
3723638
3723562
-
Arg
TCT
[Ensembl]
¡û
>C161094151
CP016170
Betaproteobacteria
Bordetella bronchialis AU3182 [CP016170]
1478326
1478402
+
Arg
TCT
-
¡û
>C161094198
CP016171
Betaproteobacteria
Bordetella bronchialis AU17976 [CP016171]
1501404
1501480
+
Arg
TCT
[Ensembl]
¡û
>C161094273
CP016172
Betaproteobacteria
Bordetella flabilis AU10664 [CP016172]
4440700
4440624
-
Arg
TCT
[Ensembl]
¡û
>C161109113
LT546645
Betaproteobacteria
Bordetella trematum H044680328 [LT546645]
113550
113474
-
Arg
TCT
[Ensembl]
¡û
>W121033583
AHJE01000022
Betaproteobacteria
Cupriavidus basilensis OR16 [AHJE]
63432
63508
+
Arg
TCT
[ENA]
¡û
>W121102775
AKXR01001744
Betaproteobacteria
Cupriavidus basilensis B-8 [AKXR]
887
963
+
Arg
TCT
[ENA]
¡û
>W1610447544
FKBR01000031
Betaproteobacteria
Bordetella trematum [FKBR]
110471
110395
-
Arg
TCT
[ENA]
¡û
>W1610447572
FKBS01000002
Betaproteobacteria
Bordetella ansorpii [FKBS]
6811
6735
-
Arg
TCT
[ENA]
¡û
>W1610447661
FKBT01000035
Betaproteobacteria
Bordetella trematum [FKBT]
110430
110354
-
Arg
TCT
[ENA]
¡û
>W1610459339
FKIF01000001
Betaproteobacteria
Bordetella ansorpii [FKIF]
301555
301479
-
Arg
TCT
[ENA]
¡û
>W1610978222
LVXY01000005
Betaproteobacteria
Cupriavidus gilardii [LVXY]
406283
406207
-
Arg
TCT
[ENA]
¡û
>W1710447172
FKBR01000031
Betaproteobacteria
Bordetella trematum [FKBR]
110471
110395
-
Arg
TCT
[ENA]
¡û
>W1710447200
FKBS01000002
Betaproteobacteria
Bordetella ansorpii [FKBS]
6811
6735
-
Arg
TCT
[ENA]
¡û
>W1710447289
FKBT01000035
Betaproteobacteria
Bordetella trematum [FKBT]
110430
110354
-
Arg
TCT
[ENA]
¡û
>W1710458967
FKIF01000001
Betaproteobacteria
Bordetella ansorpii [FKIF]
301555
301479
-
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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