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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.160684 (5 seq.)
>W1911814645
QZFU01000019
Actinomycetota
Nocardia sp. YIM PH 21724 [QZFU]
50189
50263
+
Leu
CAG
[ENA]
¡û
>W2011347893
QZFU01000019
Actinomycetota
Nocardia sp. YIM PH 21724 [QZFU]
50189
50263
+
Leu
CAG
[ENA]
¡û
>W2110695629
JAIRBQ010000006
Actinomycetota
Nocardia sp. JCM 34519 [JAIRBQ]
298370
298444
+
Leu
CAG
[ENA]
¡û
>W2110695681
JAIRBR010000003
Actinomycetota
Nocardia sp. JCM 34519.1 [JAIRBR]
283219
283145
-
Leu
CAG
[ENA]
¡û
>C241106118
CP046172
Actinomycetota
Nocardia arthritidis AUSMDU00012717 [CP046172]
7067360
7067434
+
Leu
CAG
-
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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