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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.161002 (10 seq.)
>W1810091034
PGGT01000079
Actinomycetota
Zhihengliuella halotolerans La12 [PGGT]
26924
26998
+
Leu
TAA
[ENA]
¡û
>W1810788301
QREH01000001
Actinomycetota
Citricoccus muralis DSM 14442 [QREH]
3506391
3506466
+
Leu
TAA
[ENA]
¡û
>W2010309249
CABWLF010000009
Actinomycetota
Citricoccus sp. K5 [CABWLF]
147072
147146
+
Leu
TAA
[ENA]
¡û
>W2010595793
JABEVV010000001
Actinomycetota
Cellulosimicrobium funkei MOSEL-ME6 [JABEVV]
647665
647590
-
Leu
TAA
[ENA]
¡û
>W2010595846
JABEVV010000016
Actinomycetota
Cellulosimicrobium funkei MOSEL-ME6 [JABEVV]
29255
29181
-
Leu
TAA
[ENA]
¡û
>W2011580393
SHLA01000001
Actinomycetota
Zhihengliuella halotolerans DSM 17364 [SHLA]
1876351
1876277
-
Leu
TAA
[ENA]
¡û
>W2110030579
BMLQ01000001
Actinomycetota
Citricoccus zhacaiensis CGMCC 1.7064 [BMLQ]
638643
638569
-
Leu
TAA
[ENA]
¡û
>W2110047608
BMXK01000009
Actinomycetota
Zhihengliuella salsuginis KCTC 19466 [BMXK]
96117
96192
+
Leu
TAA
[ENA]
¡û
>W2110362680
JADOTZ010000001
Actinomycetota
Zhihengliuella flava DSM 26152 [JADOTZ]
845010
844935
-
Leu
TAA
[ENA]
¡û
>W2110484828
JAFEMX010000006
Actinomycetota
Micrococcaceae bacterium RIT 802 [JAFEMX]
73919
73845
-
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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