tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.161120 (139 seq.)
>W1710803954 LJYX01000006 Gammaproteobacteria Colwellia sp. TT2012 [LJYX] 531661 531585 - Trp CCA [ENA] ¡û
>W1710804021 LJYX01000021 Gammaproteobacteria Colwellia sp. TT2012 [LJYX] 638264 638188 - Trp CCA [ENA] ¡û
>W1710821510 LKTL01000044 Gammaproteobacteria Shewanella sp. P1-14-1 [LKTL] 13579 13503 - Trp CCA [ENA] ¡û
>W1711027056 LRDC01000009 Gammaproteobacteria Shewanella frigidimarina [LRDC] 118157 118081 - Trp CCA [ENA] ¡û
>W1711273430 LZFV01000002 Gammaproteobacteria Shewanella sp. UCD-FRSSP16_17 [LZFV] 602788 602712 - Trp CCA [ENA] ¡û
>W1711340582 MCBT01000040 Gammaproteobacteria Shewanella colwelliana [MCBT] 1328 1404 + Trp CCA [ENA] ¡û
>W131177221 ARKQ01000013 Gammaproteobacteria Colwellia piezophila ATCC BAA-637 [ARKQ] 704 780 + Trp CCA [ENA] ¡û
>W131177233 ARKQ01000031 Gammaproteobacteria Colwellia piezophila ATCC BAA-637 [ARKQ] 111371 111447 + Trp CCA [ENA] ¡û
>W1711624495 MPHJ01000026 Gammaproteobacteria Shewanella sp. UCD-KL12 [MPHJ] 30426 30350 - Trp CCA [ENA] ¡û
>W1711624623 MPHK01000028 Gammaproteobacteria Shewanella sp. UCD-KL21 [MPHK] 2060 2136 + Trp CCA [ENA] ¡û
>W1712080444 NGZL01000016 Gammaproteobacteria Shewanella putrefaciens [NGZL] 33500 33424 - Trp CCA [ENA] ¡û
>C171033382 CP014782 Gammaproteobacteria Shewanella psychrophila WP2 [CP014782] 4974530 4974454 - Trp CCA - ¡û
>C171108605 CP020472 Gammaproteobacteria Shewanella japonica KCTC 22435 [CP020472] 3956660 3956584 - Trp CCA - ¡û
>W131225179 AUDJ01000008 Gammaproteobacteria Ferrimonas kyonanensis DSM 18153 [AUDJ] 25713 25637 - Trp CCA [ENA] ¡û
>C020669 CP000563 Gammaproteobacteria Shewanella baltica OS155 [CP000563] 3851058 3850982 - Trp CCA [Ensembl] ¡û
>C020983 CP000302 Gammaproteobacteria Shewanella denitrificans OS217 [CP000302] 3649190 3649114 - Trp CCA [Ensembl] ¡û
>C021944 CP000447 Gammaproteobacteria Shewanella frigidimarina NCIMB 400 [CP000447] 800254 800330 + Trp CCA [Ensembl] ¡û
>C022216 CP000469 Gammaproteobacteria Shewanella sp. ANA-3 [CP000469] 1153202 1153278 + Trp CCA [Ensembl] ¡û
>C022414 CP000444 Gammaproteobacteria Shewanella sp. MR-7 [CP000444] 1174523 1174599 + Trp CCA [Ensembl] ¡û
>w028585 ABDD01000064 Gammaproteobacteria Shewanella sediminis HAW-EB3 [ABDD] 10136 10058 - Trp CCA [ENA] ¡û
>w019992 AAUO01000025 Gammaproteobacteria Shewanella woodyi ATCC 51908 [AAUO] 71330 71408 + Trp CCA [ENA] ¡û
>w007647 AAIU01000001 Gammaproteobacteria Shewanella denitrificans OS-217 [AAIU] 298526 298448 - Trp CCA [ENA] ¡û
>W141171248 AXZL01000076 Gammaproteobacteria Shewanella decolorationis S12 [AXZL] 59214 59138 - Trp CCA [ENA] ¡û
>W08005703 ABIC01000061 Gammaproteobacteria Shewanella benthica KT99 [ABIC] 5954 6030 + Trp CCA [ENA] ¡û
>C08010577 CP000821 Gammaproteobacteria Shewanella sediminis HAW-EB3 [CP000821] 4252165 4252092 - Trp CCA [Ensembl] ¡û
>C08008758 CP000891 Gammaproteobacteria Shewanella baltica OS195 [CP000891] 4125966 4125893 - Trp CCA [Ensembl] ¡û
>W141276578 JADX01000013 Gammaproteobacteria Shewanella fidelis ATCC BAA-318 [JADX] 26793 26717 - Trp CCA [ENA] ¡û
>W141276847 JAEC01000040 Gammaproteobacteria Shewanella colwelliana ATCC 39565 [JAEC] 1478 1554 + Trp CCA [ENA] ¡û
>W141277066 JAEH01000033 Gammaproteobacteria Shewanella waksmanii ATCC BAA-643 [JAEH] 26105 26029 - Trp CCA [ENA] ¡û
>C08010773 CP000961 Gammaproteobacteria Shewanella woodyi ATCC 51908 [CP000961] 4523048 4522975 - Trp CCA [Ensembl] ¡û
>WENV170023992 BCQL01013837 [BCQL] museum specimen metagenome; Liagora japonica specimen isolated from Misaki, Miura, Kanagawa 1162 1086 - Trp CCA [ENA] ¡û
>WENV021229 AACY020564179 Marine microbial communities from Global Ocean Sampling (GOS) 6260 6182 - Trp CCA [ENA]
>WENV021239 AACY020564220 Marine microbial communities from Global Ocean Sampling (GOS) 37551 37473 - Trp CCA [ENA]
>W09103078 AAIV01000001 Gammaproteobacteria Shewanella frigidimarina NCIMB 400 [AAIV] 421025 420949 - Trp CCA [ENA] ¡û
>W09103909 AALB01000005 Gammaproteobacteria Shewanella putrefaciens CN-32 [AALB] 58895 58819 - Trp CCA [ENA] ¡û
>C181057579 CP022089 Gammaproteobacteria Shewanella sp. FDAARGOS_354 [CP022089] 2381266 2381190 - Trp CCA - ¡û
>C181061291 CP022272 Gammaproteobacteria Shewanella marisflavi EP1 [CP022272] 1040541 1040617 + Trp CCA - ¡û
>C181075003 CP023019 Gammaproteobacteria Shewanella sp. WE21 [CP023019] 3063197 3063273 + Trp CCA - ¡û
>C181164488 CP028355 Gammaproteobacteria Shewanella baltica CW2 [CP028355] 2984756 2984832 + Trp CCA - ¡û
>C181214197 LS483452 Gammaproteobacteria Shewanella benthica DB21MT-2 [LS483452] 3898310 3898234 - Trp CCA - ¡û
>C191017625 CP020373 Gammaproteobacteria Shewanella khirikhana TH2012 [CP020373] 2734195 2734119 - Trp CCA - ¡û
>C191117227 CP034015 Gammaproteobacteria Shewanella livingstonensis LMG 19866 [CP034015] 4191111 4191035 - Trp CCA - ¡û
>C191148704 CP036200 Gammaproteobacteria Shewanella maritima D4-2 [CP036200] 3286526 3286602 + Trp CCA - ¡û
>C191173196 CP039928 Gammaproteobacteria Shewanella sp. MEBiC00475 [CP039928] 3082205 3082281 + Trp CCA - ¡û
>C191185874 CP041036 Gammaproteobacteria Shewanella polaris SM1901 [CP041036] 3802177 3802101 - Trp CCA - ¡û
>C191187176 CP041153 Gammaproteobacteria Shewanella marisflavi ECSMB14101 [CP041153] 999321 999397 + Trp CCA - ¡û
>C191205216 LR134303 Gammaproteobacteria Shewanella putrefaciens NCTC12093 [LR134303] 3211079 3211155 + Trp CCA - ¡û
>W141802010 JPEO01000010 Gammaproteobacteria Shewanella mangrovi YQH10 [JPEO] 74738 74814 + Trp CCA [ENA] ¡û
>W1910676735 MCTV01000025 Gammaproteobacteria Shewanella sp. 10N.286.52.C2 [MCTV] 697 773 + Trp CCA [ENA] ¡û
>W1910676926 MCTY01000094 Gammaproteobacteria Shewanella sp. 10N.286.52.B9 [MCTY] 532 608 + Trp CCA [ENA] ¡û
>W1910677496 MCUF01000056 Gammaproteobacteria Shewanella sp. 10N.286.51.B7 [MCUF] 70217 70141 - Trp CCA [ENA] ¡û
>W1910679472 MCVG01000016 Gammaproteobacteria Shewanella sp. 10N.286.48.B5 [MCVG] 696 772 + Trp CCA [ENA] ¡û
>W1910679665 MCVI01000021 Gammaproteobacteria Shewanella sp. 10N.286.48.A6 [MCVI] 320463 320387 - Trp CCA [ENA] ¡û
>W1911710164 QPQU01000026 Gammaproteobacteria Shewanella pacifica KCTC 12235 [QPQU] 933 1009 + Trp CCA [ENA] ¡û
>W1810005650 BFBQ01000004 Gammaproteobacteria Shewanella halifaxensis 6JANF4-E-4 [BFBQ] 74964 75040 + Trp CCA [ENA] ¡û
>W1810155315 PJAP01000810 Gammaproteobacteria Shewanella sp. 11B5 [PJAP] 150 74 - Trp CCA [ENA] ¡û
>W1810157815 PJCD01000044 Gammaproteobacteria Shewanella sp. ALD9 [PJCD] 382 458 + Trp CCA [ENA] ¡û
>W1810157856 PJCE01000001 Gammaproteobacteria Shewanella sp. Actino-trap-3 [PJCE] 4130343 4130419 + Trp CCA [ENA] ¡û
>W2010140930 BLRE01000008 Gammaproteobacteria Shewanella xiamenensis SxND_W2_2018 [BLRE] 266182 266258 + Trp CCA [ENA] ¡û
>W2010473921 JAAIKQ010000003 Gammaproteobacteria Shewanella sp. WXL01 [JAAIKQ] 921 997 + Trp CCA [ENA] ¡û
>W2010635807 JABULX010000012 Gammaproteobacteria Catenovulum sp. SM1970 [JABULX] 78085 78009 - Trp CCA [ENA] ¡û
>W2010635845 JABULX010000049 Gammaproteobacteria Catenovulum sp. SM1970 [JABULX] 165 241 + Trp CCA [ENA] ¡û
>W2010734422 JACJDU010000020 Gammaproteobacteria Shewanella sp. SR44-4 [JACJDU] 71917 71841 - Trp CCA [ENA] ¡û
>W2010734488 JACJDV010000005 Gammaproteobacteria Shewanella sp. SR44-3 [JACJDV] 35627 35703 + Trp CCA [ENA] ¡û
>W2010736904 JACJEU010000050 Gammaproteobacteria Shewanella sp. SG44-2 [JACJEU] 639 715 + Trp CCA [ENA] ¡û
>W2010790012 LVDJ01000011 Gammaproteobacteria Shewanella sp. KCT [LVDJ] 1132 1208 + Trp CCA [ENA] ¡û
>W2010790170 LVDL01000012 Gammaproteobacteria Shewanella xiamenensis ZYW1 [LVDL] 21954 22030 + Trp CCA [ENA] ¡û
>W2010810465 MCTV01000025 Gammaproteobacteria Shewanella sp. 10N.286.52.C2 [MCTV] 697 773 + Trp CCA [ENA] ¡û
>W2010810657 MCTY01000094 Gammaproteobacteria Shewanella sp. 10N.286.52.B9 [MCTY] 532 608 + Trp CCA [ENA] ¡û
>W2010811229 MCUF01000056 Gammaproteobacteria Shewanella sp. 10N.286.51.B7 [MCUF] 70217 70141 - Trp CCA [ENA] ¡û
>W2010813207 MCVG01000016 Gammaproteobacteria Shewanella sp. 10N.286.48.B5 [MCVG] 696 772 + Trp CCA [ENA] ¡û
>W2010813400 MCVI01000021 Gammaproteobacteria Shewanella sp. 10N.286.48.A6 [MCVI] 320463 320387 - Trp CCA [ENA] ¡û
>W2011175929 OXJV01000016 Gammaproteobacteria Shewanella algidipiscicola [OXJV] 396648 396572 - Trp CCA [ENA] ¡û
>W2011284642 QPQU01000026 Gammaproteobacteria Shewanella pacifica KCTC 12235 [QPQU] 933 1009 + Trp CCA [ENA] ¡û
>W2011451071 RKKB01000002 Gammaproteobacteria Shewanella sp. R106 [RKKB] 417297 417221 - Trp CCA [ENA] ¡û
>W2011451164 RKKC01000009 Gammaproteobacteria Shewanella frigidimarina KCCM 41815 [RKKC] 212240 212164 - Trp CCA [ENA] ¡û
>W2011451306 RKKE01000002 Gammaproteobacteria Shewanella arctica Kim et al. 2012 KCTC 23109 [RKKE] 1050264 1050188 - Trp CCA [ENA] ¡û
>W2011498295 RXNV01000020 Gammaproteobacteria Shewanella atlantica HAW-EB5 [RXNV] 1200 1276 + Trp CCA [ENA] ¡û
>W2011498296 RXNV01000020 Gammaproteobacteria Shewanella atlantica HAW-EB5 [RXNV] 1907 1983 + Trp CCA [ENA] ¡û
>W2011839806 UGYP01000001 Gammaproteobacteria Shewanella putrefaciens NCTC10695 [UGYP] 4059848 4059924 + Trp CCA [ENA] ¡û
>W2012023563 VFSJ01000067 Gammaproteobacteria Shewanella sp. LC2 [VFSJ] 35856 35780 - Trp CCA [ENA] ¡û
>W2012070554 VKHR01000090 Gammaproteobacteria Shewanella sp. TC10 [VKHR] 11707 11631 - Trp CCA [ENA] ¡û
>W2012106450 VOQB01000003 Gammaproteobacteria Shewanella sp. YLB-07 [VOQB] 626982 626906 - Trp CCA [ENA] ¡û
>W2012350778 WJHV01000004 Gammaproteobacteria Shewanella sp. XMDDZSB0408 [WJHV] 340743 340667 - Trp CCA [ENA] ¡û
>W2012425827 WRPA01000016 Gammaproteobacteria Shewanella insulae JBTF-M18 [WRPA] 101911 101835 - Trp CCA [ENA] ¡û
>W2030067453 WSRZ01000013 Gammaproteobacteria Shewanella litoralis JCM 32306 [WSRZ] 645 721 + Trp CCA [ENA] ¡û
>W2110026445 BMII01000071 Gammaproteobacteria Shewanella inventionis CGMCC 1.15339 [BMII] 8313 8237 - Trp CCA [ENA] ¡û
>W2110035185 BMPK01000006 Gammaproteobacteria Shewanella putrefaciens JCM 20190 [BMPK] 219201 219125 - Trp CCA [ENA] ¡û
>W2110037389 BMQW01000004 Gammaproteobacteria Shewanella ulleungensis JCM 32305 [BMQW] 406927 406851 - Trp CCA [ENA] ¡û
>W2110069023 BPET01000062 Gammaproteobacteria Shewanella sp. MBTL60-007 [BPET] 1050 1126 + Trp CCA [ENA] ¡û
>W2110069024 BPET01000062 Gammaproteobacteria Shewanella sp. MBTL60-007 [BPET] 1316 1392 + Trp CCA [ENA] ¡û
>W2110069108 BPEU01000024 Gammaproteobacteria Shewanella colwelliana MBTL60-118 [BPEU] 1846 1922 + Trp CCA [ENA] ¡û
>W2110069223 BPEV01000080 Gammaproteobacteria Shewanella sp. KT0246 [BPEV] 1626 1702 + Trp CCA [ENA] ¡û
>W2110069342 BPEX01000013 Gammaproteobacteria Shewanella schlegeliana JCM 11561 [BPEX] 125735 125659 - Trp CCA [ENA] ¡û
>W2110069807 BPFB01000021 Gammaproteobacteria Shewanella algidipiscicola LMG 23746 [BPFB] 71914 71838 - Trp CCA [ENA] ¡û
>W2110143193 JAAIKR010000006 Gammaproteobacteria Shewanella intestini MCCC 1A01895 [JAAIKR] 837 913 + Trp CCA [ENA] ¡û
>W2110180743 JABKAW020000001 Gammaproteobacteria Shewanella sp. BF02_Schw [JABKAW] 1762 1838 + Trp CCA [ENA] ¡û
>W2110305595 JADDKM010000032 Gammaproteobacteria Shewanella benthica DSM 8812 [JADDKM] 2377 2453 + Trp CCA [ENA] ¡û
>W2110392069 JADWMP020000001 Gammaproteobacteria Shewanella sp. DW31 [JADWMP] 1230 1154 - Trp CCA [ENA] ¡û
>W2110453503 JAESVD010000005 Gammaproteobacteria Shewanella schlegeliana JCM 11561 [JAESVD] 386483 386407 - Trp CCA [ENA] ¡û
>W2110556856 JAGJDZ010000017 Gammaproteobacteria Shewanella sp. MMG014 [JAGJDZ] 583 659 + Trp CCA [ENA] ¡û
>W2110597352 JAHEPS010000003 Gammaproteobacteria Shewanella sp. JM162201 [JAHEPS] 1018 1094 + Trp CCA [ENA] ¡û
>W2110648248 JAHUTT010000024 Gammaproteobacteria Shewanella sp. NIFS-20-20 [JAHUTT] 2698 2774 + Trp CCA [ENA] ¡û
>W2110667411 JAHZST010000019 Gammaproteobacteria Shewanella sp. NR704-98 [JAHZST] 100156 100080 - Trp CCA [ENA] ¡û
>C201098433 CP041614 Gammaproteobacteria Shewanella sp. YLB-06 [CP041614] 1405708 1405784 + Trp CCA - ¡û
>C201211329 CP048031 Gammaproteobacteria Shewanella sp. Arc9-LZ [CP048031] 3910084 3910008 - Trp CCA - ¡û
>C211028939 AP025014 Gammaproteobacteria Shewanella xiamenensis NUITM-VS1 [AP025014] 3829736 3829660 - Trp CCA - ¡û
>C211156632 CP062058 Gammaproteobacteria Shewanella sp. WPAGA9 [CP062058] 3309066 3308990 - Trp CCA - ¡û
>C211292056 CP071503 Gammaproteobacteria Shewanella sp. FJAT-51800 [CP071503] 1064983 1065059 + Trp CCA - ¡û
>C211322032 CP073587 Gammaproteobacteria Shewanella sp. FJAT-54481 [CP073587] 2844517 2844441 - Trp CCA - ¡û
>C211377963 CP080414 Gammaproteobacteria Shewanella sp. FJAT-52072 [CP080414] 3289925 3289849 - Trp CCA - ¡û
>C211378598 CP080421 Gammaproteobacteria Shewanella sp. FJAT-53870 [CP080421] 1057489 1057565 + Trp CCA - ¡û
>C211382133 CP080633 Gammaproteobacteria Shewanella putrefaciens YZ08 [CP080633] 3812950 3812874 - Trp CCA - ¡û
>C231047066 CP041216 Gammaproteobacteria Shewanella glacialimarina TZS-4 [CP041216] 3535998 3535922 - Trp CCA - ¡û
>C231287643 CP090974 Gammaproteobacteria Shewanella sp. OMA3-2 [CP090974] 1325471 1325547 + Trp CCA - ¡û
>C231366888 CP096169 Gammaproteobacteria Shewanella sp. JNE2 [CP096169] 3479656 3479580 - Trp CCA - ¡û
>C231500234 CP104900 Gammaproteobacteria Shewanella seohaensis KCTC 23556 [CP104900] 4094950 4094874 - Trp CCA - ¡û
>C241061751 CP041783 Gammaproteobacteria Shewanella donghaensis LT17 [CP041783] 2236190 2236114 - Trp CCA - ¡û
>W10119062 ADVH01000015 Gammaproteobacteria Shewanella baltica OS678 [ADVH] 27811 27735 - Trp CCA [ENA] ¡û
>W2130001657 BMQX01000011 Gammaproteobacteria Shewanella litoralis JCM 32306 [BMQX] 563 639 + Trp CCA [ENA] ¡û
>C241274126 CP126972 Gammaproteobacteria Shewanella goraebulensis DAU312 [CP126972] 3925396 3925320 - Trp CCA - ¡û
>C241374354 CP143431 Gammaproteobacteria Shewanella oncorhynchi B [CP143431] 1122487 1122563 + Trp CCA - ¡û
>C241390116 OX461117 Gammaproteobacteria Shewanella baltica SF1039 [OX461117] 1162651 1162727 + Trp CCA - ¡û
>C10112874 AP011177 Gammaproteobacteria Shewanella violacea DSS12 [AP011177] 3867888 3867812 - Trp CCA [Ensembl] ¡û
>C11119373 CP002767 Gammaproteobacteria Shewanella baltica BA175 [CP002767] 1286480 1286556 + Trp CCA [Ensembl] ¡û
>C11119515 CP002811 Gammaproteobacteria Shewanella baltica OS117 [CP002811] 3945490 3945414 - Trp CCA [Ensembl] ¡û
>W11125234 ADVH01000015 Gammaproteobacteria Shewanella baltica OS678 [ADVH] 27811 27735 - Trp CCA [ENA] ¡û
>W11169874 AFOZ01000014 Gammaproteobacteria Shewanella sp. HN-41 [AFOZ] 333067 333143 + Trp CCA [ENA] ¡û
>C161052264 CP013145 Gammaproteobacteria Colwellia sp. MT41 [CP013145] 4018796 4018720 - Trp CCA [Ensembl] ¡û
>C161052294 CP013145 Gammaproteobacteria Colwellia sp. MT41 [CP013145] 1044413 1044337 - Trp CCA [Ensembl] ¡û
>W121103337 AKZL01000092 Gammaproteobacteria Shewanella sp. POL2 [AKZL] 5652 5576 - Trp CCA [ENA] ¡û
>W1610460578 FKJK01000004 Gammaproteobacteria Shewanella woodyi Alg231_23 [FKJK] 439921 439845 - Trp CCA [ENA] ¡û
>W1610685472 LKTL01000044 Gammaproteobacteria Shewanella sp. P1-14-1 [LKTL] 13579 13503 - Trp CCA [ENA] ¡û
>WENV075890 AACY024060902 Marine microbial communities from Global Ocean Sampling (GOS) 761 683 - Trp CCA [ENA]
>W1610875168 LRDC01000009 Gammaproteobacteria Shewanella frigidimarina [LRDC] 118157 118081 - Trp CCA [ENA] ¡û
>W1611032779 LZFV01000002 Gammaproteobacteria Shewanella sp. UCD-FRSSP16_17 [LZFV] 602788 602712 - Trp CCA [ENA] ¡û
>W1710460142 FKJK01000004 Gammaproteobacteria Shewanella woodyi Alg231_23 [FKJK] 439921 439845 - Trp CCA [ENA] ¡û
>W1710519077 FNEM01000004 Gammaproteobacteria Ferrimonas sediminum [FNEM] 361645 361569 - Trp CCA [ENA] ¡û
>W1710706690 LDOA01000001 Gammaproteobacteria Shewanella xiamenensis [LDOA] 415463 415387 - Trp CCA [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK