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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.161525 (11 seq.)
>W1710914168
LNTD01000061
Actinomycetota
Cellulomonas sp. B6 [LNTD]
25109
25185
+
Thr
TGT
[ENA]
¡û
>W1910181103
BJLQ01000040
Actinomycetota
Cellulomonas gelida NBRC 3748 [BJLQ]
6006
6081
+
Thr
TGT
[ENA]
¡û
>W1810058052
PDJD01000001
Actinomycetota
Serinibacter salmoneus DSM 21801 [PDJD]
2357302
2357226
-
Thr
TGT
[ENA]
¡û
>W1810368689
PVZV01000001
Actinomycetota
Actinocorallia populi A251 [PVZV]
1367241
1367317
+
Thr
TGT
[ENA]
¡û
>W1810402872
PYHR01000002
Actinomycetota
Serinibacter arcticus PCH200 [PYHR]
3564197
3564273
+
Thr
TGT
[ENA]
¡û
>W1810702147
QMGD01001566
Actinomycetota
Cellulomonas sp. B12 [QMGD]
511
437
-
Thr
TGT
[ENA]
¡û
>W1810702164
QMGE01000131
Actinomycetota
Cellulomonas sp. K38 [QMGE]
2470
2544
+
Thr
TGT
[ENA]
¡û
>W2011423421
RHPJ01000002
Actinomycetota
Serinibacter sp. K3-2 [RHPJ]
910882
910957
+
Thr
TGT
[ENA]
¡û
>W2011433026
RJKE01000001
Actinomycetota
Actinocorallia herbida DSM 44254 [RJKE]
8638047
8637972
-
Thr
TGT
[ENA]
¡û
>W2110517222
JAFMUZ010000007
Actinomycetota
Cellulomonas sp. zg-ZUI22 [JAFMUZ]
67696
67620
-
Thr
TGT
[ENA]
¡û
>W2130038499
JAHVCI010000064
Actinomycetota
Cellulomonas sp. PS-H5 [JAHVCI]
4192
4267
+
Thr
TGT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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