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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.161528 (6 seq.)
>W1711178096
LWGL01000077
Actinomycetota
Cellulosimicrobium cellulans [LWGL]
287
211
-
Leu
CAA
[ENA]
¡û
>W1711505521
MKVO01000011
Actinomycetota
Micrococcales bacterium 73-15 [MKVO]
79077
79001
-
Leu
CAA
[ENA]
¡û
>W1810058037
PDJD01000001
Actinomycetota
Serinibacter salmoneus DSM 21801 [PDJD]
1473113
1473187
+
Leu
CAA
[ENA]
¡û
>W1810402892
PYHR01000002
Actinomycetota
Serinibacter arcticus PCH200 [PYHR]
351554
351479
-
Leu
CAA
[ENA]
¡û
>W2011423436
RHPJ01000003
Actinomycetota
Serinibacter sp. K3-2 [RHPJ]
354688
354613
-
Leu
CAA
[ENA]
¡û
>W2011447872
RKHQ01000002
Actinomycetota
Salana multivorans DSM 13521 [RKHQ]
407392
407317
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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