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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.163943 (8 seq.)
>WENV021372
AACY020566090
Marine microbial communities from Global Ocean Sampling (GOS)
321
243
-
His
GTG
[ENA]
>WENV039074
AACY021982252
Marine microbial communities from Global Ocean Sampling (GOS)
675
753
+
His
GTG
[ENA]
>WENV049204
AACY022775711
Marine microbial communities from Global Ocean Sampling (GOS)
301
379
+
His
GTG
[ENA]
>WENV006150
AACY020169269
Marine microbial communities from Global Ocean Sampling (GOS)
223
301
+
His
GTG
[ENA]
>WENV006199
AACY020169834
Marine microbial communities from Global Ocean Sampling (GOS)
999
921
-
His
GTG
[ENA]
>WENV006318
AACY020171614
Marine microbial communities from Global Ocean Sampling (GOS)
1932
2010
+
His
GTG
[ENA]
>WENV006497
AACY020174831
Marine microbial communities from Global Ocean Sampling (GOS)
893
971
+
His
GTG
[ENA]
>WENV007020
AACY020183172
Marine microbial communities from Global Ocean Sampling (GOS)
1482
1404
-
His
GTG
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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