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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.163948 (267 seq.)
>W1710822214
LKUR01000021
Actinomycetota
Bifidobacterium bifidum [LKUR]
68545
68471
-
Met
CAT
[ENA]
¡û
>W1711082557
LSUI01000023
Actinomycetota
Bifidobacterium bifidum [LSUI]
42160
42086
-
Met
CAT
[ENA]
¡û
>W1711082656
LSUL01000008
Actinomycetota
Bifidobacterium bifidum [LSUL]
45660
45586
-
Met
CAT
[ENA]
¡û
>W1711577727
MNQB01000028
Actinomycetota
Bifidobacterium bifidum [MNQB]
67379
67305
-
Met
CAT
[ENA]
¡û
>W1711938031
NAQK01000005
Actinomycetota
Bifidobacterium bifidum [NAQK]
77115
77041
-
Met
CAT
[ENA]
¡û
>W1711959094
NBYL01000002
Actinomycetota
Bifidobacterium bifidum [NBYL]
66216
66142
-
Met
CAT
[ENA]
¡û
>W131043477
AMPM01000007
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [AMPM]
3336
3262
-
Met
CAT
[ENA]
¡û
>WENV180127905
OATA01008693
[OATA] human gut metagenome; faeces
1446
1372
-
Ile2
CAT
[ENA]
¢þ
>WENV180128449
OATB01000152
[OATB] human gut metagenome; faeces
7034
6960
-
Ile2
CAT
[ENA]
¢þ
>WENV180132251
OATH01004409
[OATH] human gut metagenome; faeces
440
514
+
Ile2
CAT
[ENA]
¢þ
>WENV180136747
OATN01001172
[OATN] human gut metagenome; faeces
4401
4475
+
Ile2
CAT
[ENA]
¢þ
>WENV180137066
OATO01000179
[OATO] human gut metagenome; faeces
509
583
+
Ile2
CAT
[ENA]
¢þ
>WENV180142009
OATV01000415
[OATV] human gut metagenome; faeces
5788
5862
+
Ile2
CAT
[ENA]
¢þ
>WENV180142590
OATW01001978
[OATW] human gut metagenome; faeces
507
581
+
Ile2
CAT
[ENA]
¢þ
>WENV180147198
OAUG01002446
[OAUG] human gut metagenome; faeces
1437
1511
+
Ile2
CAT
[ENA]
¢þ
>WENV180147698
OAUH01002013
[OAUH] human gut metagenome; faeces
835
761
-
Ile2
CAT
[ENA]
¢þ
>WENV180149180
OAUK01025096
[OAUK] human gut metagenome; faeces
538
464
-
Ile2
CAT
[ENA]
¢þ
>WENV180151995
OAUP01002630
[OAUP] human gut metagenome; faeces
441
515
+
Ile2
CAT
[ENA]
¢þ
>WENV180152634
OAUQ01015331
[OAUQ] human gut metagenome; faeces
706
632
-
Ile2
CAT
[ENA]
¢þ
>WENV180157391
OAUX01000018
[OAUX] human gut metagenome; faeces
63546
63472
-
Ile2
CAT
[ENA]
¢þ
>WENV180162944
OAVH01000391
[OAVH] human gut metagenome; faeces
511
585
+
Ile2
CAT
[ENA]
¢þ
>WENV180163832
OAVI01001522
[OAVI] human gut metagenome; faeces
1651
1577
-
Ile2
CAT
[ENA]
¢þ
>WENV180165432
OAVK01001592
[OAVK] human gut metagenome; faeces
508
582
+
Ile2
CAT
[ENA]
¢þ
>WENV180165788
OAVL01000038
[OAVL] human gut metagenome; faeces
6056
6130
+
Ile2
CAT
[ENA]
¢þ
>WENV180169248
OAVS01002306
[OAVS] human gut metagenome; faeces
3226
3300
+
Ile2
CAT
[ENA]
¢þ
>WENV180171214
OAVW01000017
[OAVW] human gut metagenome; faeces
64488
64414
-
Ile2
CAT
[ENA]
¢þ
>WENV180172208
OAVX01000423
[OAVX] human gut metagenome; faeces
6792
6718
-
Ile2
CAT
[ENA]
¢þ
>WENV180172825
OAVY01000035
[OAVY] human gut metagenome; faeces
77034
77108
+
Ile2
CAT
[ENA]
¢þ
>WENV180173323
OAVZ01000859
[OAVZ] human gut metagenome; faeces
509
583
+
Ile2
CAT
[ENA]
¢þ
>WENV180174266
OAWA01012540
[OAWA] human gut metagenome; faeces
786
712
-
Ile2
CAT
[ENA]
¢þ
>WENV180176541
OAWD01000232
[OAWD] human gut metagenome; faeces
43737
43663
-
Ile2
CAT
[ENA]
¢þ
>WENV180177333
OAWE01000719
[OAWE] human gut metagenome; faeces
509
583
+
Ile2
CAT
[ENA]
¢þ
>WENV180184069
OAWR01000469
[OAWR] human gut metagenome; faeces
7122
7048
-
Ile2
CAT
[ENA]
¢þ
>WENV180186091
OAWU01001601
[OAWU] human gut metagenome; faeces
510
584
+
Ile2
CAT
[ENA]
¢þ
>WENV180188210
OAWW01011198
[OAWW] human gut metagenome; faeces
759
685
-
Ile2
CAT
[ENA]
¢þ
>WENV180188879
OAWX01002203
[OAWX] human gut metagenome; faeces
510
584
+
Ile2
CAT
[ENA]
¢þ
>WENV180191112
OAXB01000543
[OAXB] human gut metagenome; faeces
447
521
+
Ile2
CAT
[ENA]
¢þ
>WENV180195921
OAZZ01003889
[OAZZ] human gut metagenome; faeces
437
511
+
Ile2
CAT
[ENA]
¢þ
>WENV180289699
OBIU01000066
[OBIU] human gut metagenome; human gut
6783
6857
+
Ile2
CAT
[ENA]
¢þ
>WENV180409383
OBUU01000833
[OBUU] human gut metagenome; faeces
4350
4424
+
Ile2
CAT
[ENA]
¢þ
>WENV180412714
OBVA01008358
[OBVA] human gut metagenome; faeces
814
740
-
Ile2
CAT
[ENA]
¢þ
>WENV180414662
OBVD01000183
[OBVD] human gut metagenome; faeces
61836
61762
-
Ile2
CAT
[ENA]
¢þ
>WENV180418663
OBVK01002161
[OBVK] human gut metagenome; faeces
327
401
+
Ile2
CAT
[ENA]
¢þ
>WENV180418938
OBVL01002000
[OBVL] human gut metagenome; faeces
804
730
-
Ile2
CAT
[ENA]
¢þ
>WENV180419312
OBVM01001036
[OBVM] human gut metagenome; faeces
540
466
-
Ile2
CAT
[ENA]
¢þ
>WENV180420795
OBVP01000044
[OBVP] human gut metagenome; faeces
26822
26896
+
Ile2
CAT
[ENA]
¢þ
>WENV180422513
OBVT01005938
[OBVT] human gut metagenome; faeces
87
161
+
Ile2
CAT
[ENA]
¢þ
>WENV180428042
OBWB01003400
[OBWB] human gut metagenome; faeces
791
717
-
Ile2
CAT
[ENA]
¢þ
>WENV180437207
OBWO01001223
[OBWO] human gut metagenome; faeces
3793
3719
-
Ile2
CAT
[ENA]
¢þ
>WENV180438498
OBWS01000039
[OBWS] human gut metagenome; faeces
58147
58221
+
Ile2
CAT
[ENA]
¢þ
>WENV180441314
OBWW01000170
[OBWW] human gut metagenome; faeces
6743
6669
-
Ile2
CAT
[ENA]
¢þ
>WENV180445800
OBXA01027548
[OBXA] human gut metagenome; faeces
779
705
-
Ile2
CAT
[ENA]
¢þ
>WENV180451534
OBXI01020108
[OBXI] human gut metagenome; faeces
47
121
+
Ile2
CAT
[ENA]
¢þ
>WENV180452574
OBXK01000025
[OBXK] human gut metagenome; faeces
64541
64467
-
Ile2
CAT
[ENA]
¢þ
>WENV180454835
OBXO01000069
[OBXO] human gut metagenome; faeces
63501
63427
-
Ile2
CAT
[ENA]
¢þ
>WENV180459627
OBXX01001050
[OBXX] human gut metagenome; faeces
510
584
+
Ile2
CAT
[ENA]
¢þ
>WENV180460994
OBXZ01003502
[OBXZ] human gut metagenome; faeces
817
743
-
Ile2
CAT
[ENA]
¢þ
>WENV180462383
OBYB01001707
[OBYB] human gut metagenome; faeces
5121
5047
-
Ile2
CAT
[ENA]
¢þ
>WENV180466811
OBYG01011255
[OBYG] human gut metagenome; faeces
468
542
+
Ile2
CAT
[ENA]
¢þ
>WENV180473718
OBYR01001518
[OBYR] human gut metagenome; faeces
3158
3232
+
Ile2
CAT
[ENA]
¢þ
>WENV180475079
OBYU01000093
[OBYU] human gut metagenome; faeces
63482
63408
-
Ile2
CAT
[ENA]
¢þ
>WENV180478364
OBZB01000233
[OBZB] human gut metagenome; faeces
8143
8069
-
Ile2
CAT
[ENA]
¢þ
>WENV180486512
OBZM01000550
[OBZM] human gut metagenome; faeces
508
582
+
Ile2
CAT
[ENA]
¢þ
>WENV180489291
OBZS01000018
[OBZS] human gut metagenome; faeces
64501
64575
+
Ile2
CAT
[ENA]
¢þ
>WENV180490674
OBZU01012323
[OBZU] human gut metagenome; faeces
730
656
-
Ile2
CAT
[ENA]
¢þ
>WENV180491929
OBZW01000091
[OBZW] human gut metagenome; faeces
1019
945
-
Ile2
CAT
[ENA]
¢þ
>WENV180493955
OBZZ01001083
[OBZZ] human gut metagenome; faeces
6823
6749
-
Ile2
CAT
[ENA]
¢þ
>WENV180495204
OCAA01013404
[OCAA] human gut metagenome; faeces
704
630
-
Ile2
CAT
[ENA]
¢þ
>WENV180495714
OCAB01000481
[OCAB] human gut metagenome; faeces
4404
4478
+
Ile2
CAT
[ENA]
¢þ
>WENV180496443
OCAD01002073
[OCAD] human gut metagenome; faeces
4749
4823
+
Ile2
CAT
[ENA]
¢þ
>WENV180497997
OCAF01000436
[OCAF] human gut metagenome; faeces
508
582
+
Ile2
CAT
[ENA]
¢þ
>WENV180498442
OCAG01000195
[OCAG] human gut metagenome; faeces
63356
63282
-
Ile2
CAT
[ENA]
¢þ
>WENV180499331
OCAH01001246
[OCAH] human gut metagenome; faeces
1021
947
-
Ile2
CAT
[ENA]
¢þ
>WENV180500665
OCAJ01000058
[OCAJ] human gut metagenome; faeces
63356
63282
-
Ile2
CAT
[ENA]
¢þ
>WENV180501873
OCAK01010423
[OCAK] human gut metagenome; faeces
791
717
-
Ile2
CAT
[ENA]
¢þ
>WENV180505020
OCAO01000666
[OCAO] human gut metagenome; faeces
8366
8440
+
Ile2
CAT
[ENA]
¢þ
>WENV180513058
OCHA01006321
[OCHA] human gut metagenome; human gut
623
697
+
Ile2
CAT
[ENA]
¢þ
>WENV180596699
OCPI01000337
[OCPI] human gut metagenome; faeces
14117
14191
+
Ile2
CAT
[ENA]
¢þ
>WENV180601230
OCPQ01013546
[OCPQ] human gut metagenome; faeces
490
564
+
Ile2
CAT
[ENA]
¢þ
>WENV180602909
OCPR01012278
[OCPR] human gut metagenome; human gut
1383
1309
-
Ile2
CAT
[ENA]
¢þ
>WENV180604240
OCPS01002611
[OCPS] human gut metagenome; human gut
6780
6854
+
Ile2
CAT
[ENA]
¢þ
>WENV180606973
OCPU01000093
[OCPU] human gut metagenome; human gut
64547
64473
-
Ile2
CAT
[ENA]
¢þ
>WENV180634130
OCRA01215660
[OCRA] human gut metagenome; human gut
177
103
-
Ile2
CAT
[ENA]
¢þ
>WENV180845061
ODKR01003346
[ODKR] human metagenome; G_DNA_Posterior fornix
6
80
+
Ile2
CAT
[ENA]
¢þ
>WENV181132872
OEGE01024586
[OEGE] human metagenome; G_DNA_Stool
108
182
+
Ile2
CAT
[ENA]
¢þ
>WENV181187623
OENZ01000045
[OENZ] human gut metagenome; human gut
26809
26735
-
Ile2
CAT
[ENA]
¢þ
>WENV181216686
OFCG01000037
[OFCG] metagenome; Human gut stool
45539
45465
-
Ile2
CAT
[ENA]
¢þ
>WENV181217727
OFCL01000026
[OFCL] metagenome; Human gut stool
64934
64860
-
Ile2
CAT
[ENA]
¢þ
>WENV181218214
OFCM01000038
[OFCM] metagenome; Human gut stool
43529
43455
-
Ile2
CAT
[ENA]
¢þ
>WENV181218766
OFCN01000038
[OFCN] metagenome; Human gut stool
64620
64546
-
Ile2
CAT
[ENA]
¢þ
>WENV181219469
OFCP01000013
[OFCP] metagenome; Human gut stool
65999
65925
-
Ile2
CAT
[ENA]
¢þ
>WENV181221043
OFCU01000044
[OFCU] metagenome; Human gut stool
64952
64878
-
Ile2
CAT
[ENA]
¢þ
>WENV181222101
OFDA01000053
[OFDA] metagenome; Human gut stool
64621
64547
-
Ile2
CAT
[ENA]
¢þ
>WENV181330828
OFLZ01000067
[OFLZ] human gut metagenome; human gut
44477
44551
+
Ile2
CAT
[ENA]
¢þ
>WENV181336819
OFME01000057
[OFME] human gut metagenome; human gut
65931
65857
-
Ile2
CAT
[ENA]
¢þ
>WENV181345255
OFML01000009
[OFML] human gut metagenome; human gut
64474
64400
-
Ile2
CAT
[ENA]
¢þ
>WENV181347244
OFMM01001514
[OFMM] human gut metagenome; human gut
1681
1607
-
Ile2
CAT
[ENA]
¢þ
>WENV181348129
OFMN01000107
[OFMN] human gut metagenome; human gut
43128
43202
+
Ile2
CAT
[ENA]
¢þ
>WENV181353559
OFMR01026413
[OFMR] human gut metagenome; human gut
112
186
+
Ile2
CAT
[ENA]
¢þ
>WENV181366280
OFPS01001926
[OFPS] human gut metagenome; human gut
1940
1866
-
Ile2
CAT
[ENA]
¢þ
>WENV181424037
OGCO01037217
[OGCO] human gut metagenome; human gut
782
708
-
Ile2
CAT
[ENA]
¢þ
>W141143960
AWSW01000024
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AWSW]
30598
30672
+
Met
CAT
[ENA]
¡û
>WENV181470431
OGEU01004485
[OGEU] metagenome; Human gut stool
4793
4719
-
Ile2
CAT
[ENA]
¢þ
>WENV181522894
OGHF01010573
[OGHF] metagenome; Human gut stool
1256
1182
-
Ile2
CAT
[ENA]
¢þ
>WENV181671566
OGON01002794
[OGON] human gut metagenome; faeces
6042
5968
-
Ile2
CAT
[ENA]
¢þ
>WENV181673555
OGOO01004586
[OGOO] human gut metagenome; faeces
6926
7000
+
Ile2
CAT
[ENA]
¢þ
>WENV181689969
OGOY01009919
[OGOY] human gut metagenome; faeces
3147
3221
+
Ile2
CAT
[ENA]
¢þ
>WENV181692203
OGOZ01087781
[OGOZ] human gut metagenome; faeces
141
67
-
Ile2
CAT
[ENA]
¢þ
>WENV181701110
OGPH01000300
[OGPH] human gut metagenome; faeces
1797
1723
-
Ile2
CAT
[ENA]
¢þ
>WENV181705743
OGPK01026689
[OGPK] human gut metagenome; faeces
778
704
-
Ile2
CAT
[ENA]
¢þ
>WENV181714874
OGPR01008351
[OGPR] human gut metagenome; faeces
2474
2400
-
Ile2
CAT
[ENA]
¢þ
>WENV181723112
OGPW01001663
[OGPW] human gut metagenome; faeces
8219
8293
+
Ile2
CAT
[ENA]
¢þ
>WENV181727259
OGPZ01055035
[OGPZ] human gut metagenome; faeces
352
278
-
Ile2
CAT
[ENA]
¢þ
>WENV181755794
OGQS01018515
[OGQS] human gut metagenome; faeces
784
710
-
Ile2
CAT
[ENA]
¢þ
>WENV181764245
OGQX01054769
[OGQX] human gut metagenome; faeces
669
595
-
Ile2
CAT
[ENA]
¢þ
>WENV181770694
OGRB01018257
[OGRB] human gut metagenome; faeces
383
457
+
Ile2
CAT
[ENA]
¢þ
>WENV181781265
OGRJ01028485
[OGRJ] human gut metagenome; faeces
403
477
+
Ile2
CAT
[ENA]
¢þ
>WENV181786829
OGRN01006510
[OGRN] human gut metagenome; faeces
6171
6097
-
Ile2
CAT
[ENA]
¢þ
>WENV181793959
OGRR01026357
[OGRR] human gut metagenome; faeces
800
726
-
Ile2
CAT
[ENA]
¢þ
>WENV181797470
OGRU01004718
[OGRU] human gut metagenome; faeces
6495
6569
+
Ile2
CAT
[ENA]
¢þ
>WENV181829733
OGUN01052917
[OGUN] human gut metagenome; faeces
785
711
-
Ile2
CAT
[ENA]
¢þ
>WENV181898943
OGXT01029985
[OGXT] human gut metagenome; faeces
405
479
+
Ile2
CAT
[ENA]
¢þ
>WENV181913467
OGYE01008764
[OGYE] human gut metagenome; faeces
1020
1094
+
Ile2
CAT
[ENA]
¢þ
>WENV181938063
OGYW01002661
[OGYW] human gut metagenome; faeces
6487
6561
+
Ile2
CAT
[ENA]
¢þ
>WENV181945668
OGZB01036453
[OGZB] human gut metagenome; faeces
421
495
+
Ile2
CAT
[ENA]
¢þ
>W08010161
ABQP01000023
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [ABQP]
27205
27279
+
Met
CAT
[ENA]
¡û
>WENV182394573
OIEJ01000059
[OIEJ] human gut metagenome; human gut
45522
45448
-
Ile2
CAT
[ENA]
¢þ
>WENV182400311
OIEQ01000045
[OIEQ] human gut metagenome; human gut
63522
63448
-
Ile2
CAT
[ENA]
¢þ
>WENV182401387
OIER01001448
[OIER] human gut metagenome; human gut
352
278
-
Ile2
CAT
[ENA]
¢þ
>WENV182403643
OIEU01000071
[OIEU] human gut metagenome; human gut
5536
5610
+
Ile2
CAT
[ENA]
¢þ
>WENV182435180
OIJB01019471
[OIJB] human gut metagenome; human gut
38
112
+
Ile2
CAT
[ENA]
¢þ
>WENV182446605
OILA01008625
[OILA] human gut metagenome; human gut
698
624
-
Ile2
CAT
[ENA]
¢þ
>WENV182452983
OIMF01018483
[OIMF] human gut metagenome; human gut
720
646
-
Ile2
CAT
[ENA]
¢þ
>WENV182598646
OJJD01012008
[OJJD] metagenome; faeces
846
772
-
Ile2
CAT
[ENA]
¢þ
>WENV182778162
OJSC01028584
[OJSC] human gut metagenome; human gut
364
438
+
Ile2
CAT
[ENA]
¢þ
>WENV182779535
OJSD01004820
[OJSD] human gut metagenome; human gut
2802
2728
-
Ile2
CAT
[ENA]
¢þ
>WENV182794371
OJSP01008368
[OJSP] human gut metagenome; human gut
1466
1392
-
Ile2
CAT
[ENA]
¢þ
>WENV182796267
OJSQ01010998
[OJSQ] human gut metagenome; human gut
1737
1663
-
Ile2
CAT
[ENA]
¢þ
>WENV182802283
OJUG01008131
[OJUG] human gut metagenome; human gut
2501
2427
-
Ile2
CAT
[ENA]
¢þ
>WENV182805128
OJVC01000284
[OJVC] human gut metagenome; human gut
5866
5940
+
Ile2
CAT
[ENA]
¢þ
>WENV182805393
OJVE01000165
[OJVE] human gut metagenome; human gut
17332
17258
-
Ile2
CAT
[ENA]
¢þ
>WENV182865275
OKQJ01000158
[OKQJ] human gut metagenome; human gut
2634
2708
+
Ile2
CAT
[ENA]
¢þ
>WENV182872164
OKRV01002402
[OKRV] human gut metagenome; faeces
6401
6327
-
Ile2
CAT
[ENA]
¢þ
>WENV182875582
OKRX01002313
[OKRX] human gut metagenome; faeces
6619
6693
+
Ile2
CAT
[ENA]
¢þ
>WENV182941678
OKVG01005263
[OKVG] human gut metagenome; human gut
2723
2649
-
Ile2
CAT
[ENA]
¢þ
>WENV182947131
OKVL01001776
[OKVL] human gut metagenome; human gut
6116
6190
+
Ile2
CAT
[ENA]
¢þ
>WENV182947763
OKVN01000051
[OKVN] human gut metagenome; human gut
19964
20038
+
Ile2
CAT
[ENA]
¢þ
>WENV182950847
OKVT01000065
[OKVT] human gut metagenome; human gut
7007
7081
+
Ile2
CAT
[ENA]
¢þ
>WENV182954169
OKWA01000090
[OKWA] human gut metagenome; human gut
66283
66209
-
Ile2
CAT
[ENA]
¢þ
>WENV183063386
OLIF01036268
[OLIF] metagenome; faeces
336
410
+
Ile2
CAT
[ENA]
¢þ
>WENV183083185
OLJB01024257
[OLJB] human gut metagenome; human gut
1269
1195
-
Ile2
CAT
[ENA]
¢þ
>WENV183096547
OLNE01000043
[OLNE] human gut metagenome; faeces
64944
64870
-
Ile2
CAT
[ENA]
¢þ
>WENV183106076
OLNL01001784
[OLNL] human gut metagenome; faeces
3894
3968
+
Ile2
CAT
[ENA]
¢þ
>WENV183115552
OLNQ01011318
[OLNQ] human gut metagenome; faeces
3985
4059
+
Ile2
CAT
[ENA]
¢þ
>WENV183119036
OLNT01001613
[OLNT] human gut metagenome; faeces
6092
6018
-
Ile2
CAT
[ENA]
¢þ
>WENV183126268
OLNY01008118
[OLNY] human gut metagenome; faeces
895
821
-
Ile2
CAT
[ENA]
¢þ
>WENV183133926
OLOC01001588
[OLOC] human gut metagenome; faeces
6339
6413
+
Ile2
CAT
[ENA]
¢þ
>WENV183159783
OLOU01012364
[OLOU] human gut metagenome; faeces
210
136
-
Ile2
CAT
[ENA]
¢þ
>WENV183167699
OLOZ01000665
[OLOZ] human gut metagenome; faeces
7375
7449
+
Ile2
CAT
[ENA]
¢þ
>WENV183179401
OLPH01003717
[OLPH] human gut metagenome; faeces
6070
5996
-
Ile2
CAT
[ENA]
¢þ
>WENV183182227
OLPK01000074
[OLPK] human gut metagenome; faeces
64814
64740
-
Ile2
CAT
[ENA]
¢þ
>WENV183189026
OLPQ01000245
[OLPQ] human gut metagenome; faeces
1019
945
-
Ile2
CAT
[ENA]
¢þ
>WENV183206826
OLQA01003059
[OLQA] human gut metagenome; faeces
1011
937
-
Ile2
CAT
[ENA]
¢þ
>WENV183209234
OLQB01027536
[OLQB] human gut metagenome; faeces
1565
1639
+
Ile2
CAT
[ENA]
¢þ
>WENV183211540
OLQC01096231
[OLQC] human gut metagenome; faeces
486
560
+
Ile2
CAT
[ENA]
¢þ
>WENV183214961
OLQG01000006
[OLQG] human gut metagenome; faeces
76736
76662
-
Ile2
CAT
[ENA]
¢þ
>WENV183217229
OLQI01000091
[OLQI] human gut metagenome; faeces
42380
42306
-
Ile2
CAT
[ENA]
¢þ
>WENV183227502
OLQQ01000035
[OLQQ] human gut metagenome; faeces
44836
44762
-
Ile2
CAT
[ENA]
¢þ
>WENV183231383
OLQU01000032
[OLQU] human gut metagenome; faeces
67344
67418
+
Ile2
CAT
[ENA]
¢þ
>WENV183244923
OLRE01000711
[OLRE] human gut metagenome; faeces
6611
6685
+
Ile2
CAT
[ENA]
¢þ
>WENV183259914
OLRO01034847
[OLRO] human gut metagenome; faeces
1008
934
-
Ile2
CAT
[ENA]
¢þ
>WENV183264724
OLRS01000328
[OLRS] human gut metagenome; faeces
8643
8569
-
Ile2
CAT
[ENA]
¢þ
>WENV183266403
OLRT01002348
[OLRT] human gut metagenome; faeces
6117
6191
+
Ile2
CAT
[ENA]
¢þ
>WENV183270254
OLRV01004815
[OLRV] human gut metagenome; faeces
6852
6926
+
Ile2
CAT
[ENA]
¢þ
>WENV183297420
OLSM01002968
[OLSM] human gut metagenome; faeces
6101
6027
-
Ile2
CAT
[ENA]
¢þ
>WENV183306908
OLTD01000028
[OLTD] human gut metagenome; faeces
65062
64988
-
Ile2
CAT
[ENA]
¢þ
>WENV183314357
OLVR01001815
[OLVR] human gut metagenome; faeces
6434
6360
-
Ile2
CAT
[ENA]
¢þ
>WENV183329567
OLWB01000597
[OLWB] human gut metagenome; faeces
30246
30320
+
Ile2
CAT
[ENA]
¢þ
>WENV183338243
OLWJ01045127
[OLWJ] human gut metagenome; feces
421
347
-
Ile2
CAT
[ENA]
¢þ
>WENV183404437
OLZW01020255
[OLZW] human gut metagenome; feces
746
820
+
Ile2
CAT
[ENA]
¢þ
>WENV183501468
OMGS01000304
[OMGS] human gut metagenome; human gut
1495
1421
-
Ile2
CAT
[ENA]
¢þ
>WENV183522660
ONZR01000587
[ONZR] human gut metagenome; human gut
7171
7097
-
Ile2
CAT
[ENA]
¢þ
>WENV183527477
ONZW01000620
[ONZW] human gut metagenome; human gut
6314
6388
+
Ile2
CAT
[ENA]
¢þ
>WENV183528750
ONZX01005270
[ONZX] human gut metagenome; human gut
717
643
-
Ile2
CAT
[ENA]
¢þ
>WENV183559725
OOBT01000578
[OOBT] human gut metagenome; human gut
13169
13095
-
Ile2
CAT
[ENA]
¢þ
>WENV183560804
OOBU01000838
[OOBU] human gut metagenome; human gut
5817
5743
-
Ile2
CAT
[ENA]
¢þ
>WENV183562323
OOBW01000042
[OOBW] human gut metagenome; human gut
126912
126986
+
Ile2
CAT
[ENA]
¢þ
>WENV183567839
OOCB01001187
[OOCB] human gut metagenome; human gut
27326
27252
-
Ile2
CAT
[ENA]
¢þ
>WENV183575679
OOCI01005162
[OOCI] human gut metagenome; human gut
2536
2610
+
Ile2
CAT
[ENA]
¢þ
>WENV183580630
OOCN01000169
[OOCN] human gut metagenome; human gut
16601
16527
-
Ile2
CAT
[ENA]
¢þ
>WENV183581202
OOCN01005430
[OOCN] human gut metagenome; human gut
1127
1053
-
Ile2
CAT
[ENA]
¢þ
>WENV183590211
OOCX01000096
[OOCX] human gut metagenome; human gut
31405
31331
-
Ile2
CAT
[ENA]
¢þ
>WENV183612188
OODT01015923
[OODT] human gut metagenome; human gut
35
109
+
Ile2
CAT
[ENA]
¢þ
>WENV183655319
OQWD01013417
[OQWD] human gut metagenome; human gut
389
315
-
Ile2
CAT
[ENA]
¢þ
>WENV183751249
PPYE01006237
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
1277
1351
+
Ile2
CAT
[ENA]
¢þ
>WENV183762746
PPYE01281513
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
1145
1219
+
Ile2
CAT
[ENA]
¢þ
>WENV170104024
CEAZ01017251
[CEAZ] gut metagenome; human stools
301
375
+
Met
CAT
[ENA]
¢þ
>WENV170636200
JFBN01075773
[JFBN] chicken gut metagenome; ceca of Broiler chicken
362
436
+
Met
CAT
[ENA]
¢þ
>WENV170637467
JFBN01323352
[JFBN] chicken gut metagenome; ceca of Broiler chicken
2340
2266
-
Met
CAT
[ENA]
¢þ
>C181071735
CP022723
Actinomycetota
Bifidobacterium bifidum S6 [CP022723]
768192
768266
+
Met
CAT
-
¡û
>C191000958
AP018131
Actinomycetota
Bifidobacterium bifidum LMG 13195 JCM 7004 [AP018131]
366415
366341
-
Met
CAT
-
¡û
>C191000998
AP018132
Actinomycetota
Bifidobacterium bifidum TMC 3115 [AP018132]
826652
826578
-
Met
CAT
-
¡û
>W141523767
JGYO01000001
Actinomycetota
Bifidobacterium bifidum [JGYO]
76188
76114
-
Met
CAT
[ENA]
¡û
>W141524238
JGYX01000004
Actinomycetota
Bifidobacterium pullorum gallinarum [JGYX]
22351
22277
-
Met
CAT
[ENA]
¡û
>W141524833
JGZJ01000010
Actinomycetota
Bifidobacterium pullorum [JGZJ]
266097
266171
+
Met
CAT
[ENA]
¡û
>W141525078
JGZO01000023
Actinomycetota
Bifidobacterium scardovii [JGZO]
265422
265348
-
Met
CAT
[ENA]
¡û
>C191207979
LR134344
Actinomycetota
Bifidobacterium bifidum NCTC13001 [LR134344]
1013413
1013487
+
Met
CAT
-
¡û
>W1910829208
MWWX01000004
Actinomycetota
Bifidobacterium lemurum DSM 28807 [MWWX]
59140
59214
+
Met
CAT
[ENA]
¡û
>W1910873805
NDXI01000006
Actinomycetota
Bifidobacterium bifidum 1 G1971 [NDXI]
74951
74877
-
Met
CAT
[ENA]
¡û
>W1911078323
NMWU01000009
Actinomycetota
Bifidobacterium margollesii 61 [NMWU]
10717
10643
-
Met
CAT
[ENA]
¡û
>W1810069545
PEBK01000009
Actinomycetota
Bifidobacterium simiarum TRI 7 [PEBK]
69400
69326
-
Met
CAT
[ENA]
¡û
>W1810541416
QDIH01000001
Actinomycetota
Bifidobacterium bifidum DS33_23 [QDIH]
15201
15127
-
Met
CAT
[ENA]
¡û
>W1810541493
QDII01000034
Actinomycetota
Bifidobacterium bifidum DS31_23 [QDII]
4132
4206
+
Met
CAT
[ENA]
¡û
>W1810541680
QDIM01000034
Actinomycetota
Bifidobacterium bifidum DS26_23 [QDIM]
15210
15136
-
Met
CAT
[ENA]
¡û
>W1810542218
QDIX01000020
Actinomycetota
Bifidobacterium bifidum DS32_23 [QDIX]
1790
1716
-
Met
CAT
[ENA]
¡û
>W1810542363
QDJA01000013
Actinomycetota
Bifidobacterium bifidum DS25_23 [QDJA]
43998
43924
-
Met
CAT
[ENA]
¡û
>W1810792877
QRJI01000001
Actinomycetota
Bifidobacterium bifidum AM18-29 [QRJI]
497483
497557
+
Met
CAT
[ENA]
¡û
>W1810793084
QRJM01000001
Actinomycetota
Bifidobacterium bifidum AM18-12AC [QRJM]
497736
497810
+
Met
CAT
[ENA]
¡û
>W1810793234
QRJP01000001
Actinomycetota
Bifidobacterium bifidum AM18-1 [QRJP]
497526
497600
+
Met
CAT
[ENA]
¡û
>W1810795946
QRLK01000003
Actinomycetota
Bifidobacterium bifidum AM12-9 [QRLK]
275516
275590
+
Met
CAT
[ENA]
¡û
>W1810796337
QRLR01000002
Actinomycetota
Bifidobacterium bifidum AM12-10 [QRLR]
72093
72019
-
Met
CAT
[ENA]
¡û
>W1810798813
QRNM01000023
Actinomycetota
Bifidobacterium bifidum AF45-10 [QRNM]
31418
31344
-
Met
CAT
[ENA]
¡û
>W1810814812
QSAO01000002
Actinomycetota
Bifidobacterium bifidum AF11-25B [QSAO]
256772
256698
-
Met
CAT
[ENA]
¡û
>W1810822332
QSGB01000002
Actinomycetota
Bifidobacterium bifidum AM42-15AC [QSGB]
70172
70098
-
Met
CAT
[ENA]
¡û
>W1810824923
QSHW01000002
Actinomycetota
Bifidobacterium bifidum AM36-1AC [QSHW]
523596
523670
+
Met
CAT
[ENA]
¡û
>W1810832033
QSOS01000002
Actinomycetota
Bifidobacterium bifidum TM07-4AC [QSOS]
483757
483831
+
Met
CAT
[ENA]
¡û
>W1810832458
QSPA01000011
Actinomycetota
Bifidobacterium bifidum TM06-5 [QSPA]
7736
7810
+
Met
CAT
[ENA]
¡û
>W1810832859
QSPI01000013
Actinomycetota
Bifidobacterium bifidum TM06-10 [QSPI]
7748
7822
+
Met
CAT
[ENA]
¡û
>W1810833298
QSPQ01000005
Actinomycetota
Bifidobacterium bifidum TM05-15 [QSPQ]
65243
65169
-
Met
CAT
[ENA]
¡û
>W1810833880
QSQB01000002
Actinomycetota
Bifidobacterium bifidum TM04-12 [QSQB]
483945
484019
+
Met
CAT
[ENA]
¡û
>W1810834016
QSQE01000001
Actinomycetota
Bifidobacterium bifidum TM02-17 [QSQE]
269325
269399
+
Met
CAT
[ENA]
¡û
>W1810834068
QSQF01000001
Actinomycetota
Bifidobacterium bifidum TM02-15 [QSQF]
43311
43237
-
Met
CAT
[ENA]
¡û
>W1810836190
QSRS01000002
Actinomycetota
Bifidobacterium bifidum TF07-22 [QSRS]
428436
428510
+
Met
CAT
[ENA]
¡û
>W1810836887
QSSD01000001
Actinomycetota
Bifidobacterium bifidum TF06-14AC [QSSD]
501119
501193
+
Met
CAT
[ENA]
¡û
>W1810837731
QSSS01000006
Actinomycetota
Bifidobacterium bifidum TF05-1 [QSSS]
66565
66491
-
Met
CAT
[ENA]
¡û
>C151000238
AP012323
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [AP012323]
1660087
1660013
-
Met
CAT
[Ensembl]
¡û
>C151000526
AP012331
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [AP012331]
769607
769681
+
Met
CAT
[Ensembl]
¡û
>C151068332
CP010412
Actinomycetota
Bifidobacterium bifidum BF3 [CP010412]
1724959
1724885
-
Met
CAT
-
¡û
>C11102310
CP001840
Actinomycetota
Bifidobacterium bifidum PRL2010 [CP001840]
1656092
1656018
-
Met
CAT
[Ensembl]
¡û
>C11102357
CP002220
Actinomycetota
Bifidobacterium bifidum S17 [CP002220]
1633071
1632997
-
Met
CAT
[Ensembl]
¡û
>W1511364962
JSDS01000001
Actinomycetota
Bifidobacterium bifidum 156B [JSDS]
64150
64076
-
Met
CAT
[ENA]
¡û
>W1511365016
JSDT01000001
Actinomycetota
Bifidobacterium bifidum 324B [JSDT]
489148
489222
+
Met
CAT
[ENA]
¡û
>W1511365068
JSDU01000001
Actinomycetota
Bifidobacterium bifidum 85B [JSDU]
243547
243473
-
Met
CAT
[ENA]
¡û
>W1511365120
JSDV01000001
Actinomycetota
Bifidobacterium bifidum A8 [JSDV]
67911
67837
-
Met
CAT
[ENA]
¡û
>W1511365156
JSDW01000001
Actinomycetota
Bifidobacterium bifidum IPLA 20015 [JSDW]
64482
64408
-
Met
CAT
[ENA]
¡û
>W1511365205
JSDX01000002
Actinomycetota
Bifidobacterium bifidum IPLA 20017 [JSDX]
7119
7045
-
Met
CAT
[ENA]
¡û
>W1511365263
JSDY01000001
Actinomycetota
Bifidobacterium bifidum LMG 11582 [JSDY]
250435
250361
-
Met
CAT
[ENA]
¡û
>W1511365305
JSDZ01000001
Actinomycetota
Bifidobacterium bifidum LMG 11583 [JSDZ]
72521
72447
-
Met
CAT
[ENA]
¡û
>W1511365354
JSEA01000002
Actinomycetota
Bifidobacterium bifidum LMG 13195 [JSEA]
42446
42372
-
Met
CAT
[ENA]
¡û
>W1511365399
JSEB01000001
Actinomycetota
Bifidobacterium bifidum LMG 13200 [JSEB]
73189
73115
-
Met
CAT
[ENA]
¡û
>W1511437578
JULC01000081
Actinomycetota
Bifidobacterium scardovii 981_BLON [JULC]
2848
2922
+
Met
CAT
[ENA]
¡û
>W1511592032
LBIB01000008
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [LBIB]
40652
40578
-
Met
CAT
[ENA]
¡û
>C121001438
CP001361
Actinomycetota
Bifidobacterium bifidum BGN4 [CP001361]
1648824
1648750
-
Met
CAT
[Ensembl]
¡û
>W1610045679
BBBT01000004
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
11148
11222
+
Met
CAT
[ENA]
¡û
>W1610098214
CYXQ01000008
Actinomycetota
Bifidobacterium bifidum [CYXQ]
64377
64303
-
Met
CAT
[ENA]
¡û
>W121077177
AKCA01000001
Actinomycetota
Bifidobacterium bifidum NCIMB 41171 [AKCA]
1461678
1461604
-
Met
CAT
[ENA]
¡û
>W1610518632
JDTN01000023
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [JDTN]
26130
26056
-
Met
CAT
[ENA]
¡û
>W1610519779
JDUM01000007
Actinomycetota
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 [JDUM]
74863
74789
-
Met
CAT
[ENA]
¡û
>W1610519843
JDUN01000021
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
22138
22212
+
Met
CAT
[ENA]
¡û
>W1610921342
LSUI01000023
Actinomycetota
Bifidobacterium bifidum [LSUI]
42160
42086
-
Met
CAT
[ENA]
¡û
>W1610921441
LSUL01000008
Actinomycetota
Bifidobacterium bifidum [LSUL]
45660
45586
-
Met
CAT
[ENA]
¡û
>W1710042520
BBBT01000004
Actinomycetota
Bifidobacterium bifidum JCM 1254 [BBBT]
11148
11222
+
Met
CAT
[ENA]
¡û
>W1710082916
BDIS01000016
Actinomycetota
Bifidobacterium lemurum [BDIS]
58592
58668
+
Met
CAT
[ENA]
¡û
>W1710100969
CYXQ01000008
Actinomycetota
Bifidobacterium bifidum [CYXQ]
64377
64303
-
Met
CAT
[ENA]
¡û
>W1710558363
FOLU01000002
Actinomycetota
Bifidobacterium bifidum [FOLU]
234951
235025
+
Met
CAT
[ENA]
¡û
>W1710614152
JDTN01000023
Actinomycetota
Bifidobacterium scardovii JCM 12489 = DSM 13734 [JDTN]
26130
26056
-
Met
CAT
[ENA]
¡û
>W1710615256
JDUN01000021
Actinomycetota
Bifidobacterium pullorum DSM 20670 [JDUN]
22138
22212
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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