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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.16408 (5 seq.)
>WENV170574082
FLYM01003811
[FLYM] hot springs metagenome; Sediment
19086
18995
-
His
GTG
[ENA]
¡û
>W1911075128
NMUE01000063
Thermoproteota
Pyrobaculum aerophilum YKB31 [NMUE]
7822
7913
+
His
GTG
[ENA]
¡û
>W1911075150
NMUF01000058
Thermoproteota
Pyrobaculum aerophilum YKB32 [NMUF]
6628
6537
-
His
GTG
[ENA]
¡û
>W2011004375
NMUE01000063
Thermoproteota
Pyrobaculum aerophilum YKB31 [NMUE]
7822
7913
+
His
GTG
[ENA]
¡û
>W2011004397
NMUF01000058
Thermoproteota
Pyrobaculum aerophilum YKB32 [NMUF]
6628
6537
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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