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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.16440 (5 seq.)
>W1910439764
FWDK01000005
Actinomycetota
Varibaculum timonense Marseille-P3369 [FWDK]
61014
60923
-
Ser
GGA
[ENA]
¡û
>W2010273442
CABKUS020000013
Bacillota
Clostridiales bacterium [CABKUS]
102362
102271
-
Ser
GGA
[ENA]
¡û
>W2010284420
CABMKH010000005
Actinomycetota
Varibaculum timonense [CABMKH]
61014
60923
-
Ser
GGA
[ENA]
¡û
>W2010404887
FWDK01000005
Actinomycetota
Varibaculum timonense Marseille-P3369 [FWDK]
61014
60923
-
Ser
GGA
[ENA]
¡û
>W1510725088
CXYU01000014
Bacillota
Clostridiales bacterium mt11 [CXYU]
102362
102271
-
Ser
GGA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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