This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.166508 (10 seq.)
>WENV180689067
OCZA010494218
[OCZA] marine metagenome; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
18
94
+
Ile2
CAT
[ENA]
¡û
>WENV170125916
CENP01076702
[CENP] marine metagenome genome assembly TARA_030_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
340
264
-
Met
CAT
[ENA]
¡û
>WENV170790227
MDSV01062571
[MDSV] marine metagenome; seawater
739
663
-
Met
CAT
[ENA]
¡û
>WENV170800425
MDSV01229868
[MDSV] marine metagenome; seawater
423
347
-
Met
CAT
[ENA]
¡û
>WENV170813187
MDSW01195417
[MDSW] marine metagenome; seawater
1831
1907
+
Met
CAT
[ENA]
¡û
>WENV170846737
MDTA01047704
[MDTA] marine metagenome; seawater
603
679
+
Met
CAT
[ENA]
¡û
>WENV170859049
MDTB01030949
[MDTB] marine metagenome; seawater
16434
16510
+
Met
CAT
[ENA]
¡û
>WENV170870928
MDTB01199472
[MDTB] marine metagenome; seawater
3392
3468
+
Met
CAT
[ENA]
¡û
>WENV170931481
MDTG01185358
[MDTG] marine metagenome; seawater
354
278
-
Met
CAT
[ENA]
¡û
>WENV038255
AACY021920038
Marine microbial communities from Global Ocean Sampling (GOS)
854
778
-
Met
CAT
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK