tRNA genes clustered and arranged according to each identical group

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.166628 (95 seq.)
>W1711166955 LVVY01000057 Alphaproteobacteria Devosia elaeis S37 [LVVY] 3693 3769 + Met CAT [ENA] ¡û
>W1711175838 LWFA01000842 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 1352 1428 + Met CAT [ENA] ¡û
>W1711229665 LXYQ01000100 Alphaproteobacteria Roseovarius indicus [LXYQ] 159444 159520 + Met CAT [ENA] ¡û
>WENV014175 AACY020392497 Marine microbial communities from Global Ocean Sampling (GOS) 394 316 - Met CAT [ENA]
>WENV180041389 LLBZ010117100 [LLBZ] soil metagenome; soil from tomato rhizosphere 1266 1191 - Met CAT [ENA] ¡û
>WENV180378807 OBOO01153546 [OBOO] marine metagenome; ENVO 00002150 247 173 - Met CAT [ENA] ¡û
>WENV183700353 OZSS01198752 [OZSS] metagenome; Seawater sample 309 235 - Met CAT [ENA] ¡û
>WENV170122967 CENO01009049 [CENO] marine metagenome genome assembly TARA_033_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6967 7043 + Met CAT [ENA] ¡û
>WENV170138519 CENW01127464 [CENW] marine metagenome genome assembly TARA_032_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 759 685 - Met CAT [ENA] ¡û
>WENV170140032 CENX01050352 [CENX] marine metagenome genome assembly TARA_018_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4508 4582 + Met CAT [ENA] ¡û
>WENV170151215 CEOC01257693 [CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 601 677 + Met CAT [ENA] ¡û
>WENV170160241 CEOK01127012 [CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3 77 + Met CAT [ENA] ¡û
>WENV170170663 CEOQ01015671 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2532 2608 + Met CAT [ENA] ¡û
>WENV170179915 CEOW01031090 [CEOW] marine metagenome genome assembly TARA_058_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 484 410 - Met CAT [ENA] ¡û
>WENV170182067 CEOX01064903 [CEOX] marine metagenome genome assembly TARA_065_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 461 - Met CAT [ENA] ¡û
>WENV170183087 CEOY01056246 [CEOY] marine metagenome genome assembly TARA_056_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 233 159 - Met CAT [ENA] ¡û
>WENV170186175 CEPA01023352 [CEPA] marine metagenome genome assembly TARA_052_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 251 175 - Met CAT [ENA] ¡û
>WENV170197113 CEPK01101815 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2329 2405 + Met CAT [ENA] ¡û
>WENV170204978 CEPT01051809 [CEPT] marine metagenome genome assembly TARA_039_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 749 825 + Met CAT [ENA] ¡û
>WENV170211653 CEPW01093652 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 428 354 - Met CAT [ENA] ¡û
>WENV170211785 CEPW01108290 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 547 471 - Met CAT [ENA] ¡û
>WENV170252204 CEQT01262780 [CEQT] marine metagenome genome assembly TARA_072_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 111 187 + Met CAT [ENA] ¡û
>WENV170257477 CEQX01325688 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 538 614 + Met CAT [ENA] ¡û
>WENV170258064 CEQY01034097 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1195 1271 + Met CAT [ENA] ¡û
>WENV170342054 CETD01070139 [CETD] marine metagenome genome assembly TARA_110_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1035 959 - Met CAT [ENA] ¡û
>WENV170348715 CETG01387040 [CETG] marine metagenome genome assembly TARA_122_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 78 4 - Met CAT [ENA] ¡û
>WENV170351714 CETH01163761 [CETH] marine metagenome genome assembly TARA_122_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1492 1566 + Met CAT [ENA] ¡û
>WENV170358277 CETK01075494 [CETK] marine metagenome genome assembly TARA_111_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 691 767 + Met CAT [ENA] ¡û
>WENV170361242 CETL01329751 [CETL] marine metagenome genome assembly TARA_112_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1706 1632 - Met CAT [ENA] ¡û
>WENV170376392 CETU01062766 [CETU] marine metagenome genome assembly TARA_142_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 736 812 + Met CAT [ENA] ¡û
>WENV170381060 CETW01115802 [CETW] marine metagenome genome assembly TARA_052_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 216 142 - Met CAT [ENA] ¡û
>WENV170415341 CEUL01033184 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1598 1674 + Met CAT [ENA] ¡û
>WENV170416856 CEUL01147416 [CEUL] marine metagenome genome assembly TARA_124_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 873 949 + Met CAT [ENA] ¡û
>WENV170439889 CEUV01055879 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 177 103 - Met CAT [ENA] ¡û
>WENV170459426 CEVC01054001 [CEVC] marine metagenome genome assembly TARA_125_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 228 304 + Met CAT [ENA] ¡û
>WENV170474981 CEVH01189488 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 781 705 - Met CAT [ENA] ¡û
>WENV170479067 CEVK01162524 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 386 462 + Met CAT [ENA] ¡û
>WENV170484990 CEVN01064700 [CEVN] marine metagenome genome assembly TARA_142_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 988 1064 + Met CAT [ENA] ¡û
>WENV170490119 CEVP01235058 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 172 98 - Met CAT [ENA] ¡û
>WENV170497652 CEVS01204014 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 197 123 - Met CAT [ENA] ¡û
>WENV170498986 CEVT01100789 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 268 194 - Met CAT [ENA] ¡û
>WENV170509643 CEVY01049052 [CEVY] marine metagenome genome assembly TARA_065_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1081 1157 + Met CAT [ENA] ¡û
>WENV170521709 CEWG01029933 [CEWG] marine metagenome genome assembly TARA_102_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 181 105 - Met CAT [ENA] ¡û
>WENV170530133 CEWJ01274514 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1056 1132 + Met CAT [ENA] ¡û
>WENV170578637 FUFK010020290 [FUFK] metagenome; unknown 374 450 + Met CAT [ENA] ¡û
>WENV170587227 FUFK010476085 [FUFK] metagenome; unknown 1273 1347 + Met CAT [ENA] ¡û
>WENV170590756 FUFK010736675 [FUFK] metagenome; unknown 1724 1648 - Met CAT [ENA] ¡û
>WENV170594648 FUFK011408539 [FUFK] metagenome; unknown 402 326 - Met CAT [ENA] ¡û
>WENV170594784 FUFK011469805 [FUFK] metagenome; unknown 137 211 + Met CAT [ENA] ¡û
>WENV170679904 LFCJ01001331 [LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1 15294 15370 + Met CAT [ENA] ¡û
>WENV170682460 LFIK01000139 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 42729 42805 + Met CAT [ENA] ¡û
>WENV170683055 LFIK01004045 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 8476 8400 - Met CAT [ENA] ¡û
>WENV170683239 LFIK01007532 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 154 78 - Met CAT [ENA] ¡û
>WENV170702406 LKMJ01001778 [LKMJ] soda lake metagenome; sample PL-Br10; brine of Picturesque Lake 4093 4017 - Met CAT [ENA] ¡û
>WENV170739104 LULP01021708 [LULP] marine metagenome; Red Sea water column Station 149 - depth 25m 207 133 - Met CAT [ENA] ¡û
>WENV170804565 MDSW01049749 [MDSW] marine metagenome; seawater 6389 6313 - Met CAT [ENA] ¡û
>WENV170814074 MDSW01211264 [MDSW] marine metagenome; seawater 4115 4039 - Met CAT [ENA] ¡û
>WENV170832874 MDSZ01070163 [MDSZ] marine metagenome; seawater 17704 17778 + Met CAT [ENA] ¡û
>WENV170846620 MDTA01045762 [MDTA] marine metagenome; seawater 241 167 - Met CAT [ENA] ¡û
>WENV170864079 MDTB01100486 [MDTB] marine metagenome; seawater 9749 9823 + Met CAT [ENA] ¡û
>WENV170891942 MDTD01031650 [MDTD] marine metagenome; seawater 1975 2049 + Met CAT [ENA] ¡û
>WENV170894710 MDTD01069622 [MDTD] marine metagenome; seawater 11249 11173 - Met CAT [ENA] ¡û
>WENV170899410 MDTD01139330 [MDTD] marine metagenome; seawater 280 356 + Met CAT [ENA] ¡û
>WENV170903218 MDTD01198256 [MDTD] marine metagenome; seawater 2659 2735 + Met CAT [ENA] ¡û
>WENV170964032 MRWG01002191 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 8540 8616 + Met CAT [ENA] ¡û
>WENV025802 AACY020915193 Marine microbial communities from Global Ocean Sampling (GOS) 465 387 - Met CAT [ENA]
>W1810329478 PUHN01000048 Alphaproteobacteria Rhodobacteraceae bacterium WD3A24 [PUHN] 22644 22568 - Met CAT [ENA] ¡û
>W1810787292 QRDP01000004 Alphaproteobacteria Parasphingopyxis lamellibrachiae DSM 26725 [QRDP] 663151 663075 - Met CAT [ENA] ¡û
>SRA1013111 SRR020514.24412 Planktonic microbial communities from Sargasso Sea, BATS Station (SRP001048) 156 80 - Met CAT [SRA]
>W2110562767 JAGMWN010000001 Alphaproteobacteria Marivibrio halodurans CGMCC 1.15697 [JAGMWN] 527474 527550 + Met CAT [ENA] ¡û
>W2110570465 JAGSPC010000001 Alphaproteobacteria Erythrobacter sp. WH158 [JAGSPC] 1832254 1832330 + Met CAT [ENA] ¡û
>C211381459 CP080590 Alphaproteobacteria Devosia sp. SCS-3 [CP080590] 3334609 3334533 - Met CAT - ¡û
>C241035924 CP031598 Alphaproteobacteria Roseovarius indicus DSM 26383 [CP031598] 466653 466729 + Met CAT - ¡û
>C241095809 CP045389 Alphaproteobacteria Roseivivax sp. THAF30 [CP045389] 2972248 2972324 + Met CAT - ¡û
>C241148275 CP051130 Alphaproteobacteria Parasphingopyxis sp. CP4 [CP051130] 827426 827502 + Met CAT - ¡û
>C241148314 CP051131 Alphaproteobacteria Parasphingopyxis algicola JCM 31719 [CP051131] 587331 587407 + Met CAT - ¡û
>C241250609 CP123872 Alphaproteobacteria Temperatibacter marinus NBRC 110045 [CP123872] 3159939 3159863 - Met CAT - ¡û
>C241269850 CP126539 Alphaproteobacteria Devosia sp. RR2S18 [CP126539] 1019933 1020009 + Met CAT - ¡û
>W2310024489 BSNS01000012 Alphaproteobacteria Devosia nitrariae NBRC 112416 [BSNS] 212869 212793 - Met CAT [ENA] ¡û
>WENV040339 AACY022077534 Marine microbial communities from Global Ocean Sampling (GOS) 483 405 - Met CAT [ENA]
>W1511541930 JZEX01000061 Alphaproteobacteria Devosia geojensis BD-c194 [JZEX] 151829 151905 + Met CAT [ENA] ¡û
>WENV045279 AACY022502156 Marine microbial communities from Global Ocean Sampling (GOS) 328 252 - Met CAT [ENA]
>WENV047419 AACY022665552 Marine microbial communities from Global Ocean Sampling (GOS) 179 257 + Met CAT [ENA]
>WENV005220 AACY020145410 Marine microbial communities from Global Ocean Sampling (GOS) 3072 3150 + Met CAT [ENA]
>WENV060977 AACY023418270 Marine microbial communities from Global Ocean Sampling (GOS) 971 1049 + Met CAT [ENA]
>WENV062726 AACY023473771 Marine microbial communities from Global Ocean Sampling (GOS) 1257 1179 - Met CAT [ENA]
>W1610578294 LAXI01000006 Alphaproteobacteria Roseovarius indicus [LAXI] 24063 23987 - Met CAT [ENA] ¡û
>W1610977495 LVVY01000057 Alphaproteobacteria Devosia elaeis S37 [LVVY] 3693 3769 + Met CAT [ENA] ¡û
>W1610984151 LWFA01000842 Alphaproteobacteria Roseovarius sp. HI0049 [LWFA] 1352 1428 + Met CAT [ENA] ¡û
>W1611013535 LXYQ01000100 Alphaproteobacteria Roseovarius indicus [LXYQ] 159444 159520 + Met CAT [ENA] ¡û
>WENV081603 ABEF01052316 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 1570 1494 - Met CAT [ENA]
>W1710552350 FOGU01000002 Alphaproteobacteria Tranquillimonas rosea roseus [FOGU] 213553 213629 + Met CAT [ENA] ¡û
>W1710559864 FOMY01000007 Alphaproteobacteria Roseovarius indicus [FOMY] 252689 252765 + Met CAT [ENA] ¡û
>W1710573865 FOXV01000002 Alphaproteobacteria Roseivivax halotolerans [FOXV] 229727 229803 + Met CAT [ENA] ¡û
>W1710697167 LAXI01000006 Alphaproteobacteria Roseovarius indicus [LAXI] 24063 23987 - Met CAT [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK