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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.169927 (8 seq.)
>W131178641
ARLS01000036
Deinococcota
Deinococcus apachensis DSM 19763 [ARLS]
9568
9492
-
Ile
GAT
[ENA]
¡û
>W1911597476
PNOR01000007
Deinococcota
Deinococcus planocerae XY-FW106 [PNOR]
128524
128448
-
Ile
GAT
[ENA]
¡û
>W1810003532
BFAG01000003
Deinococcota
Deinococcus aerius TR0125 [BFAG]
309944
309868
-
Ile
GAT
[ENA]
¡û
>W2010702349
JACHHG010000008
Deinococcota
Deinobacterium chartae DSM 21458 [JACHHG]
153906
153982
+
Ile
GAT
[ENA]
¡û
>W2011206375
PNOR01000007
Deinococcota
Deinococcus planocerae XY-FW106 [PNOR]
128524
128448
-
Ile
GAT
[ENA]
¡û
>W2110614226
JAHKSN010000011
Deinococcota
Deinococcus sp. SYSU M49105 [JAHKSN]
127863
127787
-
Ile
GAT
[ENA]
¡û
>C11107164
CP002454
Deinococcota
Deinococcus maricopensis DSM 21211 [CP002454]
573955
573879
-
Ile
GAT
[Ensembl]
¡û
>C131003570
CP003382
Deinococcota
Deinococcus peraridilitoris DSM 19664 [CP003382]
1868368
1868444
+
Ile
GAT
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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