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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.170245 (8 seq.)
>W2110082979
CAINHA010000233
Unclassified
Candidatus Collierbacteria bacterium [CAINHA]
2792
2717
-
His
GTG
[ENA]
¡û
>W2110084108
CAIOQA010000003
Unclassified
Candidatus Collierbacteria bacterium [CAIOQA]
246
170
-
His
GTG
[ENA]
¡û
>W2110086005
CAIRVF010000071
Unclassified
Candidatus Collierbacteria bacterium [CAIRVF]
91647
91722
+
His
GTG
[ENA]
¡û
>W2110086132
CAISAB010000085
Unclassified
Candidatus Collierbacteria bacterium [CAISAB]
4837
4762
-
His
GTG
[ENA]
¡û
>W2110086147
CAISAB010000101
Unclassified
Candidatus Collierbacteria bacterium [CAISAB]
76
1
-
His
GTG
[ENA]
¡û
>W2110086547
CAISLM010000094
Unclassified
Candidatus Collierbacteria bacterium [CAISLM]
585
660
+
His
GTG
[ENA]
¡û
>W2110088071
CAIUNK010000049
Unclassified
Candidatus Collierbacteria bacterium [CAIUNK]
954
1029
+
His
GTG
[ENA]
¡û
>W2110089339
CAIXAD010000121
Unclassified
Candidatus Collierbacteria bacterium [CAIXAD]
2832
2757
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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