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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.173246 (6 seq.)
>W1711394210
MEPZ01000042
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYB1_FULL_39_21 [MEPZ]
104045
104121
+
Pro
GGG
[ENA]
¡û
>W1711394300
MEQC01000039
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYC1_FULL_39_130 [MEQC]
104039
104115
+
Pro
GGG
[ENA]
¡û
>W1711394361
MEQE01000041
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYC12_FULL_39_17 [MEQE]
2595
2519
-
Pro
GGG
[ENA]
¡û
>W1711394383
MEQF01000047
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYC2_FULL_39_8 [MEQF]
2235
2159
-
Pro
GGG
[ENA]
¡û
>W1711394469
MEQH01000039
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYD1_FULL_39_84 [MEQH]
104046
104122
+
Pro
GGG
[ENA]
¡û
>W1711394606
MEQL01000041
Bdellovibrionota
Bdellovibrionales bacterium RIFOXYD12_FULL_39_22 [MEQL]
104032
104108
+
Pro
GGG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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