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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.174818 (4 seq.)
>W1711585633
MNZX01000020
Unclassified
Candidatus Moranbacteria bacterium CG2_30_41_165 [MNZX]
13645
13721
+
Val
GAC
[ENA]
¡û
>W1511615802
LCNK01000002
Unclassified
Candidatus Wolfebacteria bacterium GW2011_GWC1_47_103 bacterium GW2011_GWC1_47_103 [LCNK]
82625
82701
+
Val
GAC
[ENA]
¡û
>W1511616570
LCOI01000005
Unclassified
Candidatus Wolfebacteria bacterium GW2011_GWA1_47_6 bacterium GW2011_GWA1_47_6 [LCOI]
4954
4878
-
Val
GAC
[ENA]
¡û
>W1511617435
LCPN01000066
Unclassified
Candidatus Wolfebacteria bacterium GW2011_GWE1_48_7 bacterium GW2011_GWE1_48_7 [LCPN]
1398
1322
-
Val
GAC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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