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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.174836 (15 seq.)
>W1711007489
LQPE01000148
Actinomycetota
Mycobacterium kyorinense [LQPE]
1304
1380
+
Arg
TCT
[ENA]
¡û
>W1711772537
MVHL01000043
Actinomycetota
Mycobacterium bouchedurhonense [MVHL]
32010
31934
-
Arg
TCT
[ENA]
¡û
>W1711773737
MVIL01000241
Actinomycetota
Mycobacterium timonense [MVIL]
492
568
+
Arg
TCT
[ENA]
¡û
>W1910598882
LBGZ01000006
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU466 [LBGZ]
27656
27581
-
Arg
TCT
[ENA]
¡û
>W1910658374
MBFQ01000039
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU462 [MBFQ]
6648
6573
-
Arg
TCT
[ENA]
¡û
>W2010769681
LBGZ01000006
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU466 [LBGZ]
27656
27581
-
Arg
TCT
[ENA]
¡û
>W2010805005
MBFQ01000039
Actinomycetota
Mycobacterium avium subsp. hominissuis OCU462 [MBFQ]
6648
6573
-
Arg
TCT
[ENA]
¡û
>W1710085454
BDNJ01000010
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNJ]
25557
25633
+
Arg
TCT
[ENA]
¡û
>W1710085651
BDNN01000030
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNN]
1248
1324
+
Arg
TCT
[ENA]
¡û
>W1710086109
BDNW01000057
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDNW]
5001
5077
+
Arg
TCT
[ENA]
¡û
>W1710086327
BDOA01000103
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOA]
1610
1686
+
Arg
TCT
[ENA]
¡û
>W1710086476
BDOD01000060
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOD]
19913
19989
+
Arg
TCT
[ENA]
¡û
>W1710086584
BDOF01000057
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOF]
15712
15636
-
Arg
TCT
[ENA]
¡û
>W1710086782
BDOJ01000028
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOJ]
12989
12913
-
Arg
TCT
[ENA]
¡û
>W1710086929
BDOM01000007
Actinomycetota
Mycobacterium avium subsp. hominissuis [BDOM]
7650
7726
+
Arg
TCT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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