This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.175623 (89 seq.)
>WENV180000567
FLNV01000653
[FLNV] bioreactor metagenome; Moose rumen
6563
6637
+
His
GTG
[ENA]
¡û
>WENV180000716
FLNV01001246
[FLNV] bioreactor metagenome; Moose rumen
4263
4337
+
His
GTG
[ENA]
¡û
>WENV180001189
FLNX01000222
[FLNX] bioreactor metagenome; Moose rumen
1760
1686
-
His
GTG
[ENA]
¡û
>WENV180001247
FLNX01000821
[FLNX] bioreactor metagenome; Moose rumen
297
221
-
His
GTG
[ENA]
¡û
>WENV180001260
FLNX01000948
[FLNX] bioreactor metagenome; Moose rumen
6450
6374
-
His
GTG
[ENA]
¡û
>WENV180001591
FLNX01002712
[FLNX] bioreactor metagenome; Moose rumen
51337
51411
+
His
GTG
[ENA]
¡û
>WENV180001794
FLNX01003185
[FLNX] bioreactor metagenome; Moose rumen
12324
12398
+
His
GTG
[ENA]
¡û
>WENV180002341
FLNY01001346
[FLNY] bioreactor metagenome; Moose rumen
2169
2244
+
His
GTG
[ENA]
¡û
>WENV180002440
FLNY01001929
[FLNY] bioreactor metagenome; Moose rumen
1484
1410
-
His
GTG
[ENA]
¡û
>WENV180002654
FLNY01003128
[FLNY] bioreactor metagenome; Moose rumen
34189
34263
+
His
GTG
[ENA]
¡û
>WENV180002689
FLNY01003398
[FLNY] bioreactor metagenome; Moose rumen
1286
1212
-
His
GTG
[ENA]
¡û
>WENV180563954
OCLD01008608
[OCLD] human gut metagenome; human gut
686
612
-
His
GTG
[ENA]
¡û
>WENV180658593
OCVV010780914
[OCVV] gut metagenome; gut
337
413
+
His
GTG
[ENA]
¡û
>WENV180658594
OCVV010780914
[OCVV] gut metagenome; gut
337
413
+
His
GTG
[ENA]
¡û
>WENV180661073
OCVV010986150
[OCVV] gut metagenome; gut
1003
929
-
His
GTG
[ENA]
¡û
>WENV180661074
OCVV010986150
[OCVV] gut metagenome; gut
1003
929
-
His
GTG
[ENA]
¡û
>WENV180665503
OCVV011189379
[OCVV] gut metagenome; gut
14
88
+
His
GTG
[ENA]
¡û
>WENV180665504
OCVV011189379
[OCVV] gut metagenome; gut
14
88
+
His
GTG
[ENA]
¡û
>WENV180665505
OCVV011189380
[OCVV] gut metagenome; gut
381
307
-
His
GTG
[ENA]
¡û
>WENV180665506
OCVV011189380
[OCVV] gut metagenome; gut
381
307
-
His
GTG
[ENA]
¡û
>WENV180665507
OCVV011189382
[OCVV] gut metagenome; gut
484
410
-
His
GTG
[ENA]
¡û
>WENV180665508
OCVV011189382
[OCVV] gut metagenome; gut
484
410
-
His
GTG
[ENA]
¡û
>WENV180666149
OCVV011204682
[OCVV] gut metagenome; gut
4
78
+
His
GTG
[ENA]
¡û
>WENV180666150
OCVV011204682
[OCVV] gut metagenome; gut
4
78
+
His
GTG
[ENA]
¡û
>WENV180666599
OCVV011215394
[OCVV] gut metagenome; gut
335
261
-
His
GTG
[ENA]
¡û
>WENV180666600
OCVV011215394
[OCVV] gut metagenome; gut
335
261
-
His
GTG
[ENA]
¡û
>WENV180667499
OCVV011236099
[OCVV] gut metagenome; gut
318
392
+
His
GTG
[ENA]
¡û
>WENV180667500
OCVV011236099
[OCVV] gut metagenome; gut
318
392
+
His
GTG
[ENA]
¡û
>WENV180668859
OCVV011268453
[OCVV] gut metagenome; gut
990
1064
+
His
GTG
[ENA]
¡û
>WENV180668860
OCVV011268453
[OCVV] gut metagenome; gut
990
1064
+
His
GTG
[ENA]
¡û
>WENV180670045
OCVV011291982
[OCVV] gut metagenome; gut
30924
30998
+
His
GTG
[ENA]
¡û
>WENV180670046
OCVV011291982
[OCVV] gut metagenome; gut
30924
30998
+
His
GTG
[ENA]
¡û
>WENV180672681
OCVV011331061
[OCVV] gut metagenome; gut
16
92
+
His
GTG
[ENA]
¡û
>WENV180672682
OCVV011331061
[OCVV] gut metagenome; gut
16
92
+
His
GTG
[ENA]
¡û
>WENV180679965
OCVV012418627
[OCVV] gut metagenome; gut
59
133
+
His
GTG
[ENA]
¡û
>WENV180679966
OCVV012418627
[OCVV] gut metagenome; gut
59
133
+
His
GTG
[ENA]
¡û
>WENV180680483
OCVV012546180
[OCVV] gut metagenome; gut
131
207
+
His
GTG
[ENA]
¡û
>WENV180680484
OCVV012546180
[OCVV] gut metagenome; gut
131
207
+
His
GTG
[ENA]
¡û
>WENV180681481
OCVV012774444
[OCVV] gut metagenome; gut
112
38
-
His
GTG
[ENA]
¡û
>WENV180681482
OCVV012774444
[OCVV] gut metagenome; gut
112
38
-
His
GTG
[ENA]
¡û
>WENV180681537
OCVV012779528
[OCVV] gut metagenome; gut
14
88
+
His
GTG
[ENA]
¡û
>WENV180681538
OCVV012779528
[OCVV] gut metagenome; gut
14
88
+
His
GTG
[ENA]
¡û
>WENV180683477
OCVV012841621
[OCVV] gut metagenome; gut
9941
9867
-
His
GTG
[ENA]
¡û
>WENV180683478
OCVV012841621
[OCVV] gut metagenome; gut
9941
9867
-
His
GTG
[ENA]
¡û
>WENV180683677
OCVV012844943
[OCVV] gut metagenome; gut
13177
13101
-
His
GTG
[ENA]
¡û
>WENV180683678
OCVV012844943
[OCVV] gut metagenome; gut
13177
13101
-
His
GTG
[ENA]
¡û
>WENV180684071
OCVV012852318
[OCVV] gut metagenome; gut
254
328
+
His
GTG
[ENA]
¡û
>WENV180684072
OCVV012852318
[OCVV] gut metagenome; gut
254
328
+
His
GTG
[ENA]
¡û
>WENV180684443
OCVV012857306
[OCVV] gut metagenome; gut
117
43
-
His
GTG
[ENA]
¡û
>WENV180684444
OCVV012857306
[OCVV] gut metagenome; gut
117
43
-
His
GTG
[ENA]
¡û
>WENV180685601
OCVV012874727
[OCVV] gut metagenome; gut
550
624
+
His
GTG
[ENA]
¡û
>WENV180685602
OCVV012874727
[OCVV] gut metagenome; gut
550
624
+
His
GTG
[ENA]
¡û
>WENV182422143
OIGV01000116
[OIGV] human gut metagenome; human gut
5701
5775
+
His
GTG
[ENA]
¡û
>WENV182428744
OIIB01000002
[OIIB] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV182432578
OIIP01000005
[OIIP] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV182476717
OIQI01000003
[OIQI] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV182477871
OIQM01000003
[OIQM] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV182480297
OIQX01000005
[OIQX] human gut metagenome; human gut
21991
21917
-
His
GTG
[ENA]
¡û
>WENV182484634
OIRN01000072
[OIRN] human gut metagenome; human gut
5730
5804
+
His
GTG
[ENA]
¡û
>WENV182488439
OISA01000001
[OISA] human gut metagenome; human gut
21991
21917
-
His
GTG
[ENA]
¡û
>WENV182492500
OISS01000004
[OISS] human gut metagenome; human gut
21991
21917
-
His
GTG
[ENA]
¡û
>WENV182494253
OISY01000057
[OISY] human gut metagenome; human gut
11753
11827
+
His
GTG
[ENA]
¡û
>WENV182497613
OITM01000006
[OITM] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV182505095
OIUX01000005
[OIUX] human gut metagenome; human gut
21990
21916
-
His
GTG
[ENA]
¡û
>WENV182507898
OIVP01000003
[OIVP] human gut metagenome; human gut
21990
21916
-
His
GTG
[ENA]
¡û
>WENV182984278
OKZM01000001
[OKZM] human gut metagenome; human gut
21990
21916
-
His
GTG
[ENA]
¡û
>WENV183006861
OLDG01000001
[OLDG] human gut metagenome; human gut
21990
21916
-
His
GTG
[ENA]
¡û
>WENV183016322
OLES01000110
[OLES] human gut metagenome; human gut
21991
21917
-
His
GTG
[ENA]
¡û
>WENV183020194
OLFF01000002
[OLFF] human gut metagenome; human gut
78043
78117
+
His
GTG
[ENA]
¡û
>WENV183222206
OLQM01000363
[OLQM] human gut metagenome; faeces
8584
8658
+
His
GTG
[ENA]
¡û
>WENV183323841
OLVY01000947
[OLVY] human gut metagenome; feces
16615
16689
+
His
GTG
[ENA]
¡û
>WENV183379600
OLYC01050438
[OLYC] human gut metagenome; feces
660
586
-
His
GTG
[ENA]
¡û
>WENV183384343
OLYN01002670
[OLYN] human gut metagenome; feces
1791
1865
+
His
GTG
[ENA]
¡û
>WENV183658063
OQWM01000190
[OQWM] human gut metagenome; human gut
3951
3877
-
His
GTG
[ENA]
¡û
>WENV170775843
LXOW01095969
[LXOW] bovine gut metagenome; Cow rumen
813
739
-
His
GTG
[ENA]
¡û
>WENV170775877
LXOW01100082
[LXOW] bovine gut metagenome; Cow rumen
2863
2937
+
His
GTG
[ENA]
¡û
>WENV170777466
LXOW01285150
[LXOW] bovine gut metagenome; Cow rumen
42
116
+
His
GTG
[ENA]
¡û
>WENV170777523
LXOW01293677
[LXOW] bovine gut metagenome; Cow rumen
15807
15882
+
His
GTG
[ENA]
¡û
>WENV170777888
LXOW01333851
[LXOW] bovine gut metagenome; Cow rumen
13064
12988
-
His
GTG
[ENA]
¡û
>C231305956
CP091786
Bacteroidota
Prevotella sp. E9-3 [CP091786]
2253042
2253117
+
His
GTG
-
¡û
>C231306085
CP091788
Bacteroidota
Prevotella sp. E2-28 [CP091788]
1255269
1255195
-
His
GTG
-
¡û
>C231306113
CP091790
Bacteroidota
Prevotella sp. E13-3 [CP091790]
2560513
2560587
+
His
GTG
-
¡û
>C231306214
CP091792
Bacteroidota
Prevotella sp. E1-9 [CP091792]
2557238
2557314
+
His
GTG
-
¡û
>C231306266
CP091793
Bacteroidota
Prevotella sp. E1-a [CP091793]
2557212
2557288
+
His
GTG
-
¡û
>C231306340
CP091794
Bacteroidota
Prevotella sp. E15-14 [CP091794]
1074250
1074174
-
His
GTG
-
¡û
>W1710516566
FNCQ01000021
Bacteroidota
Prevotella communis BP1-148 [FNCQ]
33937
33861
-
His
GTG
[ENA]
¡û
>W1710524619
FNIW01000006
Bacteroidota
Prevotella communis BP1-145 [FNIW]
20735
20659
-
His
GTG
[ENA]
¡û
>W1710546780
FOCK01000006
Bacteroidota
Prevotella sp. ne3005 [FOCK]
69835
69909
+
His
GTG
[ENA]
¡û
>W1710572096
FOWK01000010
Bacteroidota
Prevotella sp. tf2-5 [FOWK]
65734
65658
-
His
GTG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK