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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176229 (9 seq.)
>PHG181002327
KU737348
Herelleviridae
Bacillus phage Zuko (KU737348)
33857
33933
+
Glu
TTC
[ENA]
¡û
>PHG181002330
KU737349
Herelleviridae
Bacillus phage DIGNKC (KU737349)
33273
33349
+
Glu
TTC
[ENA]
¡û
>PHG181002587
KX147229
Herelleviridae
Bacillus phage Belinda (KX147229)
33307
33383
+
Glu
TTC
[ENA]
¡û
>PHG181003694
KX961629
Herelleviridae
Bacillus phage BJ4 (KX961629)
32334
32410
+
Glu
TTC
[ENA]
¡û
>PHG181003709
KX961632
Herelleviridae
Bacillus phage SBP8a (KX961632)
32768
32844
+
Glu
TTC
[ENA]
¡û
>PHG181005155
MF288919
Herelleviridae
Bacillus phage AaronPhadgers (MF288919)
33430
33506
+
Glu
TTC
[ENA]
¡û
>PHG181007247
MG763894
Herelleviridae
Bacillus phage HonestAbe (MG763894)
33071
33147
+
Glu
TTC
[ENA]
¡û
>PHG181008438
MH538193
Herelleviridae
Bacillus phage Saddex (MH538193)
33602
33678
+
Glu
TTC
[ENA]
¡û
>PHG14100510
HM144387
Myoviridae
Bacillus phage W.Ph. AO7543 (HM144387)
8195
8271
+
Glu
TTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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