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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.176908 (43 seq.)
>C181097571
CP024205
Spirochaetota
Borrelia miyamotoi Izh-5 [CP024205]
273926
273851
-
Arg
TCG
-
¡û
>C181099354
CP024316
Spirochaetota
Borrelia miyamotoi Yekat-6 [CP024316]
273925
273850
-
Arg
TCG
-
¡û
>C181099385
CP024333
Spirochaetota
Borrelia miyamotoi Yekat-1 [CP024333]
273933
273858
-
Arg
TCG
-
¡û
>C181099417
CP024351
Spirochaetota
Borrelia miyamotoi Izh-16 [CP024351]
273830
273755
-
Arg
TCG
-
¡û
>C181099437
CP024371
Spirochaetota
Borrelia miyamotoi Izh-14 [CP024371]
632317
632392
+
Arg
TCG
-
¡û
>C181099479
CP024390
Spirochaetota
Borrelia miyamotoi Izh-4 [CP024390]
273911
273836
-
Arg
TCG
-
¡û
>C191019322
CP021872
Spirochaetota
Borrelia miyamotoi CA17-2241 [CP021872]
631563
631638
+
Arg
TCG
-
¡û
>C141006209
CP006647
Spirochaetota
Borrelia miyamotoi LB-2001 [CP006647]
632914
632989
+
Arg
TCG
[Ensembl]
¡û
>C151066324
CP010308
Spirochaetota
Borrelia miyamotoi CT14D4 [CP010308]
632913
632988
+
Arg
TCG
[Ensembl]
¡û
>C201179013
CP046388
Spirochaetota
Borrelia miyamotoi CZ-F190E [CP046388]
273743
273668
-
Arg
TCG
-
¡û
>C201179044
CP046389
Spirochaetota
Borrelia miyamotoi CZ-F1E [CP046389]
273743
273668
-
Arg
TCG
-
¡û
>C211018999
AP024371
Spirochaetota
Borrelia miyamotoi HT31 [AP024371]
632317
632392
+
Arg
TCG
-
¡û
>C211019030
AP024372
Spirochaetota
Borrelia miyamotoi HT24 [AP024372]
632435
632510
+
Arg
TCG
-
¡û
>C211019062
AP024373
Spirochaetota
Borrelia miyamotoi Hk004 [AP024373]
632058
632133
+
Arg
TCG
-
¡û
>C211019094
AP024374
Spirochaetota
Borrelia miyamotoi NB103/1 [AP024374]
632279
632354
+
Arg
TCG
-
¡û
>C211019125
AP024375
Spirochaetota
Borrelia miyamotoi MYK1 [AP024375]
631414
631489
+
Arg
TCG
-
¡û
>C211019156
AP024391
Spirochaetota
Borrelia miyamotoi MYK2 [AP024391]
632601
632676
+
Arg
TCG
-
¡û
>C211019187
AP024392
Spirochaetota
Borrelia miyamotoi MYK3 [AP024392]
632104
632179
+
Arg
TCG
-
¡û
>C211019219
AP024393
Spirochaetota
Borrelia miyamotoi MYK4 [AP024393]
632067
632142
+
Arg
TCG
-
¡û
>C211019251
AP024394
Spirochaetota
Borrelia miyamotoi MYK5 [AP024394]
632264
632339
+
Arg
TCG
-
¡û
>C211019282
AP024395
Spirochaetota
Borrelia miyamotoi M12C4 [AP024395]
632443
632518
+
Arg
TCG
-
¡û
>C211019313
AP024396
Spirochaetota
Borrelia miyamotoi M15A8 [AP024396]
632066
632141
+
Arg
TCG
-
¡û
>C211019344
AP024397
Spirochaetota
Borrelia miyamotoi M20E6 [AP024397]
632235
632310
+
Arg
TCG
-
¡û
>C211019375
AP024398
Spirochaetota
Borrelia miyamotoi Y14T1 [AP024398]
631752
631827
+
Arg
TCG
-
¡û
>C211019406
AP024399
Spirochaetota
Borrelia miyamotoi Y15T1 [AP024399]
631955
632030
+
Arg
TCG
-
¡û
>C211019438
AP024400
Spirochaetota
Borrelia miyamotoi Y14T18 [AP024400]
631042
631117
+
Arg
TCG
-
¡û
>C211019469
AP024401
Spirochaetota
Borrelia sp. HM tHM16w [AP024401]
637916
637991
+
Arg
TCG
-
¡û
>C211308841
CP072479
Spirochaetota
Borrelia miyamotoi LB-2001 [CP072479]
632928
633003
+
Arg
TCG
-
¡û
>C231044658
CP036557
Spirochaetota
Borrelia miyamotoi Yekat-76 [CP036557]
273962
273887
-
Arg
TCG
-
¡û
>C231044689
CP036914
Spirochaetota
Borrelia miyamotoi Yekat-21 [CP036914]
273986
273911
-
Arg
TCG
-
¡û
>C231044721
CP037058
Spirochaetota
Borrelia miyamotoi Yekat-19 [CP037058]
273964
273889
-
Arg
TCG
-
¡û
>C231044752
CP037215
Spirochaetota
Borrelia miyamotoi Yekat-17 [CP037215]
273965
273890
-
Arg
TCG
-
¡û
>C231044784
CP037471
Spirochaetota
Borrelia miyamotoi Yekat-18 [CP037471]
276398
276323
-
Arg
TCG
-
¡û
>C231561506
CP114624
Spirochaetota
Borrelia miyamotoi 483 [CP114624]
274315
274240
-
Arg
TCG
-
¡û
>C231561537
CP114637
Spirochaetota
Borrelia miyamotoi 410 [CP114637]
274370
274295
-
Arg
TCG
-
¡û
>C231561568
CP114650
Spirochaetota
Borrelia miyamotoi 1938 [CP114650]
274370
274295
-
Arg
TCG
-
¡û
>C231561600
CP114663
Spirochaetota
Borrelia miyamotoi 1995 [CP114663]
274223
274148
-
Arg
TCG
-
¡û
>C231561631
CP114676
Spirochaetota
Borrelia miyamotoi 1999 [CP114676]
274368
274293
-
Arg
TCG
-
¡û
>C231561662
CP114690
Spirochaetota
Borrelia miyamotoi LB-2001 [CP114690]
274370
274295
-
Arg
TCG
-
¡û
>C231561693
CP114703
Spirochaetota
Borrelia miyamotoi HT-31 [CP114703]
274033
273958
-
Arg
TCG
-
¡û
>C231561724
CP114720
Spirochaetota
Borrelia miyamotoi ZStrulll14-3 [CP114720]
274071
273996
-
Arg
TCG
-
¡û
>C231561755
CP114738
Spirochaetota
Borrelia miyamotoi CT14D4 [CP114738]
274368
274293
-
Arg
TCG
-
¡û
>C161003192
CP004217
Spirochaetota
Borrelia miyamotoi FR64b [CP004217]
273770
273695
-
Arg
TCG
[Ensembl]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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