This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.178612 (45 seq.)
>WENV180002633
FLNY01003072
[FLNY] bioreactor metagenome; Moose rumen
763
688
-
Val
TAC
[ENA]
¡û
>WENV180143311
OATX01019746
[OATX] human gut metagenome; faeces
941
866
-
Val
TAC
[ENA]
¡û
>WENV180321482
OBKR01000081
[OBKR] human gut metagenome; feces
74
149
+
Val
TAC
[ENA]
¡û
>WENV180321751
OBKR01000383
[OBKR] human gut metagenome; feces
5
80
+
Val
TAC
[ENA]
¡û
>WENV180771772
ODIH01009422
[ODIH] human metagenome; G_DNA_Stool
3614
3539
-
Val
TAC
[ENA]
¡û
>WENV180771773
ODIH01009422
[ODIH] human metagenome; G_DNA_Stool
3519
3444
-
Val
TAC
[ENA]
¡û
>WENV181074147
OEAO01003765
[OEAO] human metagenome; G_DNA_Tongue dorsum
102
178
+
Val
TAC
[ENA]
¡û
>WENV181489256
OGFT01000195
[OGFT] metagenome; Human gut stool
10346
10421
+
Val
TAC
[ENA]
¡û
>WENV181537570
OGHX01000012
[OGHX] metagenome; Human gut stool
9239
9164
-
Val
TAC
[ENA]
¡û
>WENV181622506
OGMG01002962
[OGMG] metagenome; Human gut stool
1895
1820
-
Val
TAC
[ENA]
¡û
>WENV181649216
OGNS01000081
[OGNS] metagenome; Human gut stool
84794
84719
-
Val
TAC
[ENA]
¡û
>WENV181794459
OGRS01000637
[OGRS] human gut metagenome; faeces
75
150
+
Val
TAC
[ENA]
¡û
>W08006261
ABIY02000092
Bacteroidota
Phocaeicola coprocola DSM 17136 [ABIY]
20283
20358
+
Val
TAC
[ENA]
¡û
>WENV181955685
OGZK01006164
[OGZK] human gut metagenome; faeces
71
146
+
Val
TAC
[ENA]
¡û
>WENV181981885
OHAG01009445
[OHAG] human gut metagenome; faeces
135
60
-
Val
TAC
[ENA]
¡û
>WENV182140284
OHKQ01000582
[OHKQ] human gut metagenome; feces
74
149
+
Val
TAC
[ENA]
¡û
>WENV182297696
OHWH01003610
[OHWH] human gut metagenome; feces
3444
3369
-
Val
TAC
[ENA]
¡û
>WENV182383529
OIDT01003688
[OIDT] human gut metagenome; feces
74
149
+
Val
TAC
[ENA]
¡û
>WENV182598187
OJJD01000211
[OJJD] metagenome; faeces
14078
14003
-
Val
TAC
[ENA]
¡û
>WENV182617570
OJKE01000042
[OJKE] metagenome; faeces
68570
68495
-
Val
TAC
[ENA]
¡û
>WENV182632975
OJKY01000021
[OJKY] metagenome; faeces
138285
138210
-
Val
TAC
[ENA]
¡û
>WENV182638396
OJLA01013531
[OJLA] metagenome; faeces
1057
1132
+
Val
TAC
[ENA]
¡û
>WENV183062910
OLIF01000060
[OLIF] metagenome; faeces
36543
36618
+
Val
TAC
[ENA]
¡û
>WENV183149684
OLOO01014758
[OLOO] human gut metagenome; faeces
96
171
+
Val
TAC
[ENA]
¡û
>WENV183289997
OLSG01038280
[OLSG] human gut metagenome; faeces
995
920
-
Val
TAC
[ENA]
¡û
>WENV183492351
OMGH01010778
[OMGH] human gut metagenome; human gut
74
149
+
Val
TAC
[ENA]
¡û
>WENV183547627
OOAW01000026
[OOAW] human gut metagenome; human gut
74
149
+
Val
TAC
[ENA]
¡û
>WENV183583076
OOCP01010359
[OOCP] human gut metagenome; human gut
97
172
+
Val
TAC
[ENA]
¡û
>WENV183613820
OODU01012887
[OODU] human gut metagenome; human gut
95
170
+
Val
TAC
[ENA]
¡û
>WENV183790034
PPYF01394907
[PPYF] human gut metagenome; stool from patient with Crohn's disease
1985
1910
-
Val
TAC
[ENA]
¡û
>WENV170055816
CDZF01022416
[CDZF] gut metagenome; human stools
59
134
+
Val
TAC
[ENA]
¡û
>WENV170080589
CDZX01006100
[CDZX] gut metagenome; human stools
2293
2218
-
Val
TAC
[ENA]
¡û
>WENV170084389
CEAB01014347
[CEAB] gut metagenome; human stools
35347
35422
+
Val
TAC
[ENA]
¡û
>WENV170084391
CEAB01014347
[CEAB] gut metagenome; human stools
35554
35631
+
Val
TAC
[ENA]
¡û
>WENV170084392
CEAB01014347
[CEAB] gut metagenome; human stools
35649
35724
+
Val
TAC
[ENA]
¡û
>WENV170087327
CEAC01040121
[CEAC] gut metagenome; human stools
97762
97687
-
Val
TAC
[ENA]
¡û
>WENV170087697
CEAD01016093
[CEAD] gut metagenome; human stools
2337
2260
-
Val
TAC
[ENA]
¡û
>WENV170087698
CEAD01016093
[CEAD] gut metagenome; human stools
2242
2167
-
Val
TAC
[ENA]
¡û
>WENV170105276
CEBV01001092
[CEBV] gut metagenome; human stools
35265
35340
+
Val
TAC
[ENA]
¡û
>WENV170105492
CEBV01011670
[CEBV] gut metagenome; human stools
72729
72654
-
Val
TAC
[ENA]
¡û
>W1810826880
QSJG01000021
Bacteroidota
Phocaeicola plebeius AM31-10 [QSJG]
6964
6889
-
Val
TAC
[ENA]
¡û
>W2010263041
CABKNL020000023
Bacteroidota
Bacteroides coprocola [CABKNL]
20283
20358
+
Val
TAC
[ENA]
¡û
>W2110767939
SDWG01000009
Bacteroidota
Bacteroidales bacterium SW292 [SDWG]
100024
99947
-
Val
TAC
[ENA]
¡û
>W2110767940
SDWG01000009
Bacteroidota
Bacteroidales bacterium SW292 [SDWG]
99916
99839
-
Val
TAC
[ENA]
¡û
>WENV085462
BABD01000066
Gut microbiome of Human (healthy human sample In-D, Adult, Male)
2754
2677
-
Val
TAC
[ENA]
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK