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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.179613 (7 seq.)
>C08008394
CP000910
Actinomycetota
Renibacterium salmoninarum ATCC 33209 [CP000910]
280728
280804
+
Leu
TAA
[Ensembl]
¡û
>C181176288
CP029236
Actinomycetota
Renibacterium salmoninarum H2 [CP029236]
280728
280804
+
Leu
TAA
-
¡û
>C181176330
CP029237
Actinomycetota
Renibacterium salmoninarum DJ2R [CP029237]
280727
280803
+
Leu
TAA
-
¡û
>W141531744
JHEL01000012
Actinomycetota
Curtobacterium sp. S6 [JHEL]
34249
34325
+
Leu
TAA
[ENA]
¡û
>C151075147
CP011005
Actinomycetota
Psychromicrobium lacuslunae IHBB 11108 [CP011005]
88709
88785
+
Leu
TAA
[Ensembl]
¡û
>W2010667311
JACBYQ010000002
Actinomycetota
Psychromicrobium silvestre DSM 102047 [JACBYQ]
1207591
1207665
+
Leu
TAA
[ENA]
¡û
>W1710695802
LAVU01000146
Gammaproteobacteria
Vibrio vulnificus [LAVU]
16006
16082
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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