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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.179905 (7 seq.)
>W131195924
ASSY01000007
Actinomycetota
Adlercreutzia caecimuris B7 [ASSY]
5787
5702
-
Leu
TAG
[ENA]
¡û
>WENV181247485
OFFK01036852
[OFFK] mouse gut metagenome; faeces
1335
1250
-
Leu
TAG
[ENA]
¡û
>WENV181252567
OFFP01048384
[OFFP] mouse gut metagenome; faeces
88
173
+
Leu
TAG
[ENA]
¡û
>WENV181287610
OFGX01015494
[OFGX] mouse gut metagenome; faeces
772
857
+
Leu
TAG
[ENA]
¡û
>WENV181299713
OFHM01030675
[OFHM] mouse gut metagenome; faeces
1107
1022
-
Leu
TAG
[ENA]
¡û
>W2011346956
QZEA01000022
Actinomycetota
Enterorhabdus caecimuris 1xD42-21 [QZEA]
8002
7917
-
Leu
TAG
[ENA]
¡û
>W2011365700
RAYP01000466
Bacillota
Ruminococcus sp. 1xD21-23 [RAYP]
833
748
-
Leu
TAG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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