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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180068 (154 seq.)
>W1711580497
MNTB01000032
Bacillota
Firmicutes bacterium CAG:321_26_22 [MNTB]
28300
28385
+
Leu
CAA
[ENA]
¡û
>WENV180212933
OBAO01000190
[OBAO] human gut metagenome; human gut
19187
19102
-
Leu
CAA
[ENA]
¡û
>WENV180321590
OBKR01000156
[OBKR] human gut metagenome; feces
41712
41797
+
Leu
CAA
[ENA]
¡û
>WENV180325691
OBKS01007034
[OBKS] human gut metagenome; human gut
1909
1824
-
Leu
CAA
[ENA]
¡û
>WENV180335931
OBLG01000411
[OBLG] human gut metagenome; human gut
43135
43050
-
Leu
CAA
[ENA]
¡û
>WENV180340729
OBLI01041281
[OBLI] pig gut metagenome; faeces
938
853
-
Leu
CAA
[ENA]
¡û
>WENV180517207
OCHD01000159
[OCHD] human gut metagenome; human gut
19187
19102
-
Leu
CAA
[ENA]
¡û
>WENV180532233
OCHL01000293
[OCHL] human gut metagenome; human gut
11210
11295
+
Leu
CAA
[ENA]
¡û
>WENV180546023
OCIU01000313
[OCIU] human gut metagenome; human gut
43135
43050
-
Leu
CAA
[ENA]
¡û
>WENV180741936
ODHH01001005
[ODHH] human metagenome; G_DNA_Stool
1152
1067
-
Leu
CAA
[ENA]
¡û
>WENV180760283
ODHZ01000474
[ODHZ] human metagenome; G_DNA_Stool
44596
44511
-
Leu
CAA
[ENA]
¡û
>WENV180770796
ODIH01000730
[ODIH] human metagenome; G_DNA_Stool
11
96
+
Leu
CAA
[ENA]
¡û
>WENV180818022
ODJQ01006412
[ODJQ] human metagenome; G_DNA_Stool
3860
3945
+
Leu
CAA
[ENA]
¡û
>WENV180885675
ODME01006593
[ODME] human metagenome; G_DNA_Stool
1084
999
-
Leu
CAA
[ENA]
¡û
>WENV180894128
ODMR01037734
[ODMR] human metagenome; G_DNA_Stool
44
129
+
Leu
CAA
[ENA]
¡û
>WENV180941535
ODTZ01006486
[ODTZ] human metagenome; G_DNA_Stool
1120
1035
-
Leu
CAA
[ENA]
¡û
>WENV180970144
ODUU01001604
[ODUU] human metagenome; G_DNA_Stool
17311
17396
+
Leu
CAA
[ENA]
¡û
>WENV180996870
ODVS01001377
[ODVS] human metagenome; G_DNA_Stool
3144
3229
+
Leu
CAA
[ENA]
¡û
>WENV181060756
ODYN01000190
[ODYN] human metagenome; G_DNA_Stool
43188
43273
+
Leu
CAA
[ENA]
¡û
>WENV181087933
OEBA01000080
[OEBA] human metagenome; G_DNA_Stool
66739
66824
+
Leu
CAA
[ENA]
¡û
>WENV181161858
OEIM01020447
[OEIM] human gut metagenome; human gut
470
385
-
Leu
CAA
[ENA]
¡û
>WENV181186508
OEMZ01001830
[OEMZ] gut metagenome; human stools
2801
2886
+
Leu
CAA
[ENA]
¡û
>WENV181334701
OFMC01000133
[OFMC] human gut metagenome; human gut
37723
37808
+
Leu
CAA
[ENA]
¡û
>WENV181346691
OFMM01000018
[OFMM] human gut metagenome; human gut
44755
44840
+
Leu
CAA
[ENA]
¡û
>WENV181349635
OFMO01000228
[OFMO] human gut metagenome; human gut
19182
19097
-
Leu
CAA
[ENA]
¡û
>WENV181355517
OFMT01002865
[OFMT] human gut metagenome; human gut
7906
7821
-
Leu
CAA
[ENA]
¡û
>WENV181366586
OFPS01006907
[OFPS] human gut metagenome; human gut
3347
3432
+
Leu
CAA
[ENA]
¡û
>WENV181398212
OFSD01037249
[OFSD] human gut metagenome; human gut
295
380
+
Leu
CAA
[ENA]
¡û
>WENV181446751
OGDU01000182
[OGDU] metagenome; Human gut stool
31147
31232
+
Leu
CAA
[ENA]
¡û
>WENV181478233
OGFF01019862
[OGFF] metagenome; Human gut stool
819
734
-
Leu
CAA
[ENA]
¡û
>WENV181505193
OGGK01005492
[OGGK] metagenome; Human gut stool
4311
4396
+
Leu
CAA
[ENA]
¡û
>WENV181586708
OGKG01002940
[OGKG] metagenome; Human gut stool
9927
9842
-
Leu
CAA
[ENA]
¡û
>WENV181598350
OGLB01000036
[OGLB] metagenome; Human gut stool
43330
43245
-
Leu
CAA
[ENA]
¡û
>WENV181601650
OGLG01000123
[OGLG] metagenome; Human gut stool
19172
19087
-
Leu
CAA
[ENA]
¡û
>WENV181603961
OGLI01003725
[OGLI] metagenome; Human gut stool
3962
4047
+
Leu
CAA
[ENA]
¡û
>WENV181611478
OGLR01015413
[OGLR] metagenome; Human gut stool
1048
963
-
Leu
CAA
[ENA]
¡û
>WENV181632129
OGMT01001723
[OGMT] metagenome; Human gut stool
9032
8947
-
Leu
CAA
[ENA]
¡û
>WENV181665451
OGOJ01001452
[OGOJ] human gut metagenome; faeces
13117
13202
+
Leu
CAA
[ENA]
¡û
>WENV181680142
OGOS01015972
[OGOS] human gut metagenome; faeces
945
1030
+
Leu
CAA
[ENA]
¡û
>WENV181688340
OGOX01033333
[OGOX] human gut metagenome; faeces
1221
1306
+
Leu
CAA
[ENA]
¡û
>WENV181705392
OGPK01006523
[OGPK] human gut metagenome; faeces
1026
941
-
Leu
CAA
[ENA]
¡û
>WENV181706769
OGPL01002299
[OGPL] human gut metagenome; faeces
1294
1379
+
Leu
CAA
[ENA]
¡û
>WENV181712496
OGPQ01000137
[OGPQ] human gut metagenome; faeces
27929
27844
-
Leu
CAA
[ENA]
¡û
>WENV181716214
OGPS01004026
[OGPS] human gut metagenome; faeces
208
123
-
Leu
CAA
[ENA]
¡û
>WENV181721735
OGPV01006775
[OGPV] human gut metagenome; faeces
356
271
-
Leu
CAA
[ENA]
¡û
>WENV181725655
OGPY01007176
[OGPY] human gut metagenome; faeces
3791
3876
+
Leu
CAA
[ENA]
¡û
>WENV181750678
OGQP01008732
[OGQP] human gut metagenome; faeces
2773
2858
+
Leu
CAA
[ENA]
¡û
>WENV181776854
OGRG01010874
[OGRG] human gut metagenome; faeces
830
745
-
Leu
CAA
[ENA]
¡û
>WENV181783756
OGRL01010081
[OGRL] human gut metagenome; faeces
1071
986
-
Leu
CAA
[ENA]
¡û
>WENV181789344
OGRO01014107
[OGRO] human gut metagenome; faeces
2220
2305
+
Leu
CAA
[ENA]
¡û
>WENV181833098
OGUQ01000330
[OGUQ] metagenome; Human gut stool
4896
4981
+
Leu
CAA
[ENA]
¡û
>WENV181864643
OGWU01001288
[OGWU] human gut metagenome; faeces
1146
1061
-
Leu
CAA
[ENA]
¡û
>WENV181880748
OGXG01006588
[OGXG] human gut metagenome; faeces
11
96
+
Leu
CAA
[ENA]
¡û
>WENV181884393
OGXJ01000182
[OGXJ] human gut metagenome; faeces
32003
31918
-
Leu
CAA
[ENA]
¡û
>WENV181894569
OGXR01000381
[OGXR] human gut metagenome; faeces
29026
28941
-
Leu
CAA
[ENA]
¡û
>WENV181904175
OGXX01007165
[OGXX] human gut metagenome; faeces
3026
3111
+
Leu
CAA
[ENA]
¡û
>WENV181909762
OGYC01000677
[OGYC] human gut metagenome; faeces
13059
12974
-
Leu
CAA
[ENA]
¡û
>WENV181912702
OGYE01000579
[OGYE] human gut metagenome; faeces
397
312
-
Leu
CAA
[ENA]
¡û
>WENV181925285
OGYM01000925
[OGYM] human gut metagenome; faeces
6183
6268
+
Leu
CAA
[ENA]
¡û
>WENV181926392
OGYN01000039
[OGYN] human gut metagenome; faeces
30995
30910
-
Leu
CAA
[ENA]
¡û
>WENV181928759
OGYO01003858
[OGYO] human gut metagenome; faeces
3788
3703
-
Leu
CAA
[ENA]
¡û
>WENV181942580
OGYZ01000503
[OGYZ] human gut metagenome; faeces
18422
18337
-
Leu
CAA
[ENA]
¡û
>WENV181954862
OGZK01000533
[OGZK] human gut metagenome; faeces
30651
30566
-
Leu
CAA
[ENA]
¡û
>WENV181960494
OGZO01000148
[OGZO] human gut metagenome; faeces
39854
39769
-
Leu
CAA
[ENA]
¡û
>WENV181968105
OGZW01000371
[OGZW] human gut metagenome; faeces
12652
12567
-
Leu
CAA
[ENA]
¡û
>WENV181989643
OHAO01022561
[OHAO] human gut metagenome; faeces
913
828
-
Leu
CAA
[ENA]
¡û
>WENV181991137
OHAQ01000412
[OHAQ] human gut metagenome; faeces
29725
29640
-
Leu
CAA
[ENA]
¡û
>WENV181992808
OHAR01003353
[OHAR] human gut metagenome; feces
1970
2055
+
Leu
CAA
[ENA]
¡û
>WENV182005397
OHBE01004339
[OHBE] human gut metagenome; faeces
4252
4167
-
Leu
CAA
[ENA]
¡û
>WENV182014581
OHBQ01000150
[OHBQ] human gut metagenome; feces
34499
34584
+
Leu
CAA
[ENA]
¡û
>WENV182024125
OHCF01003221
[OHCF] human gut metagenome; feces
2850
2935
+
Leu
CAA
[ENA]
¡û
>WENV182027530
OHCN01001403
[OHCN] human gut metagenome; feces
4510
4425
-
Leu
CAA
[ENA]
¡û
>WENV182090573
OHHC01002275
[OHHC] human gut metagenome; feces
1083
998
-
Leu
CAA
[ENA]
¡û
>WENV182091266
OHHD01015335
[OHHD] human gut metagenome; feces
969
884
-
Leu
CAA
[ENA]
¡û
>WENV182131267
OHKC01018459
[OHKC] human gut metagenome; feces
34
119
+
Leu
CAA
[ENA]
¡û
>WENV182134150
OHKH01000747
[OHKH] human gut metagenome; feces
10813
10898
+
Leu
CAA
[ENA]
¡û
>WENV182136541
OHKK01001517
[OHKK] human gut metagenome; feces
1066
981
-
Leu
CAA
[ENA]
¡û
>WENV182161789
OHMG01001134
[OHMG] human gut metagenome; feces
4541
4456
-
Leu
CAA
[ENA]
¡û
>WENV182244884
OHSJ01009554
[OHSJ] human gut metagenome; feces
1138
1223
+
Leu
CAA
[ENA]
¡û
>WENV182257209
OHTF01006772
[OHTF] human gut metagenome; feces
2360
2445
+
Leu
CAA
[ENA]
¡û
>WENV182277383
OHUR01002068
[OHUR] human gut metagenome; feces
4515
4430
-
Leu
CAA
[ENA]
¡û
>WENV182287716
OHVS01030098
[OHVS] human gut metagenome; feces
361
446
+
Leu
CAA
[ENA]
¡û
>WENV182310462
OHXM01001669
[OHXM] human gut metagenome; feces
3913
3828
-
Leu
CAA
[ENA]
¡û
>WENV182319765
OHYH01000648
[OHYH] human gut metagenome; feces
10198
10113
-
Leu
CAA
[ENA]
¡û
>WENV182397873
OIEN01000077
[OIEN] human gut metagenome; human gut
43131
43046
-
Leu
CAA
[ENA]
¡û
>WENV182527489
OIWU01000331
[OIWU] human gut metagenome; faeces
58022
58107
+
Leu
CAA
[ENA]
¡û
>WENV182609558
OJJV01011628
[OJJV] metagenome; faeces
953
868
-
Leu
CAA
[ENA]
¡û
>WENV182612805
OJJY01017119
[OJJY] metagenome; faeces
181
266
+
Leu
CAA
[ENA]
¡û
>WENV182653468
OJMI01000195
[OJMI] human gut metagenome; feces
44874
44789
-
Leu
CAA
[ENA]
¡û
>WENV182660075
OJMM01000039
[OJMM] human gut metagenome; feces
35520
35435
-
Leu
CAA
[ENA]
¡û
>WENV182663401
OJMO01009501
[OJMO] human gut metagenome; feces
277
192
-
Leu
CAA
[ENA]
¡û
>WENV182668369
OJNJ01000228
[OJNJ] human gut metagenome; feces
3434
3519
+
Leu
CAA
[ENA]
¡û
>WENV182702078
OJOQ01001333
[OJOQ] human gut metagenome; stool sample
5252
5167
-
Leu
CAA
[ENA]
¡û
>WENV182876590
OKRY01000452
[OKRY] human gut metagenome; faeces
5920
6005
+
Leu
CAA
[ENA]
¡û
>WENV182886416
OKSD01000192
[OKSD] human gut metagenome; faeces
17941
17856
-
Leu
CAA
[ENA]
¡û
>WENV182918410
OKTW01004261
[OKTW] human gut metagenome; feces
2754
2839
+
Leu
CAA
[ENA]
¡û
>WENV182935737
OKVA01000858
[OKVA] human gut metagenome; feces
4554
4469
-
Leu
CAA
[ENA]
¡û
>WENV183030019
OLFW01013086
[OLFW] human gut metagenome; faeces
558
643
+
Leu
CAA
[ENA]
¡û
>WENV183043092
OLGD01019805
[OLGD] human gut metagenome; faeces
1128
1043
-
Leu
CAA
[ENA]
¡û
>WENV183045946
OLGE01041445
[OLGE] human gut metagenome; faeces
923
838
-
Leu
CAA
[ENA]
¡û
>WENV183096860
OLNE01000351
[OLNE] human gut metagenome; faeces
32409
32494
+
Leu
CAA
[ENA]
¡û
>WENV183099528
OLNF01009667
[OLNF] human gut metagenome; faeces
1003
918
-
Leu
CAA
[ENA]
¡û
>WENV183107302
OLNM01002171
[OLNM] human gut metagenome; faeces
5278
5193
-
Leu
CAA
[ENA]
¡û
>WENV183111817
OLNO01066707
[OLNO] human gut metagenome; faeces
301
386
+
Leu
CAA
[ENA]
¡û
>WENV183115575
OLNQ01011967
[OLNQ] human gut metagenome; faeces
1517
1432
-
Leu
CAA
[ENA]
¡û
>WENV183123205
OLNW01000384
[OLNW] human gut metagenome; faeces
17069
16984
-
Leu
CAA
[ENA]
¡û
>WENV183128206
OLNZ01003387
[OLNZ] human gut metagenome; faeces
4224
4309
+
Leu
CAA
[ENA]
¡û
>WENV183163436
OLOW01012485
[OLOW] human gut metagenome; faeces
171
256
+
Leu
CAA
[ENA]
¡û
>WENV183176306
OLPF01004696
[OLPF] human gut metagenome; faeces
1264
1349
+
Leu
CAA
[ENA]
¡û
>WENV183181978
OLPI01045008
[OLPI] human gut metagenome; faeces
299
214
-
Leu
CAA
[ENA]
¡û
>WENV183192374
OLPS01000160
[OLPS] human gut metagenome; faeces
44880
44795
-
Leu
CAA
[ENA]
¡û
>WENV183196492
OLPU01001240
[OLPU] human gut metagenome; faeces
3060
3145
+
Leu
CAA
[ENA]
¡û
>WENV183207410
OLQA01014485
[OLQA] human gut metagenome; faeces
1129
1044
-
Leu
CAA
[ENA]
¡û
>WENV183208968
OLQB01009873
[OLQB] human gut metagenome; faeces
930
845
-
Leu
CAA
[ENA]
¡û
>WENV183222587
OLQM01001839
[OLQM] human gut metagenome; faeces
13038
12953
-
Leu
CAA
[ENA]
¡û
>WENV183230801
OLQT01008154
[OLQT] human gut metagenome; faeces
2803
2888
+
Leu
CAA
[ENA]
¡û
>WENV183231573
OLQU01000206
[OLQU] human gut metagenome; faeces
31011
30926
-
Leu
CAA
[ENA]
¡û
>WENV183233295
OLQV01000611
[OLQV] human gut metagenome; faeces
12498
12413
-
Leu
CAA
[ENA]
¡û
>WENV183246960
OLRF01001037
[OLRF] human gut metagenome; faeces
27073
26988
-
Leu
CAA
[ENA]
¡û
>WENV183250233
OLRH01000018
[OLRH] human gut metagenome; faeces
29905
29820
-
Leu
CAA
[ENA]
¡û
>WENV183253349
OLRI01057961
[OLRI] human gut metagenome; faeces
617
702
+
Leu
CAA
[ENA]
¡û
>WENV183265920
OLRT01000189
[OLRT] human gut metagenome; faeces
6221
6306
+
Leu
CAA
[ENA]
¡û
>WENV183280533
OLSB01005858
[OLSB] human gut metagenome; faeces
1138
1053
-
Leu
CAA
[ENA]
¡û
>WENV183283554
OLSD01000779
[OLSD] human gut metagenome; faeces
28514
28429
-
Leu
CAA
[ENA]
¡û
>WENV183296359
OLSL01037169
[OLSL] human gut metagenome; faeces
841
756
-
Leu
CAA
[ENA]
¡û
>WENV183304421
OLSQ01042164
[OLSQ] human gut metagenome; faeces
1132
1047
-
Leu
CAA
[ENA]
¡û
>WENV183319572
OLVV01004125
[OLVV] human gut metagenome; feces
1042
957
-
Leu
CAA
[ENA]
¡û
>WENV183329002
OLWA01086877
[OLWA] human gut metagenome; faeces
228
143
-
Leu
CAA
[ENA]
¡û
>WENV183332983
OLWD01021230
[OLWD] human gut metagenome; feces
933
848
-
Leu
CAA
[ENA]
¡û
>WENV183333641
OLWE01004735
[OLWE] human gut metagenome; feces
1002
917
-
Leu
CAA
[ENA]
¡û
>WENV183334667
OLWF01005100
[OLWF] human gut metagenome; feces
1045
960
-
Leu
CAA
[ENA]
¡û
>WENV183339184
OLWK01018533
[OLWK] human gut metagenome; feces
723
808
+
Leu
CAA
[ENA]
¡û
>WENV183340923
OLWL01079884
[OLWL] human gut metagenome; feces
1
86
+
Leu
CAA
[ENA]
¡û
>WENV183344862
OLWQ01011689
[OLWQ] human gut metagenome; feces
768
683
-
Leu
CAA
[ENA]
¡û
>WENV183346281
OLWS01003525
[OLWS] human gut metagenome; feces
1026
941
-
Leu
CAA
[ENA]
¡û
>WENV183348491
OLWU01053758
[OLWU] human gut metagenome; feces
551
636
+
Leu
CAA
[ENA]
¡û
>WENV183349923
OLWW01009723
[OLWW] human gut metagenome; feces
1061
976
-
Leu
CAA
[ENA]
¡û
>WENV183366448
OLXO01025271
[OLXO] human gut metagenome; feces
311
396
+
Leu
CAA
[ENA]
¡û
>WENV183381763
OLYJ01050166
[OLYJ] human gut metagenome; feces
400
485
+
Leu
CAA
[ENA]
¡û
>WENV183385326
OLYN01064431
[OLYN] human gut metagenome; feces
217
132
-
Leu
CAA
[ENA]
¡û
>WENV183556070
OOBN01062838
[OOBN] human gut metagenome; human gut
419
504
+
Leu
CAA
[ENA]
¡û
>WENV183565493
OOBZ01009359
[OOBZ] human gut metagenome; human gut
1142
1057
-
Leu
CAA
[ENA]
¡û
>WENV183601935
OODJ01008195
[OODJ] human gut metagenome; human gut
4197
4282
+
Leu
CAA
[ENA]
¡û
>WENV183634683
OOIG01090890
[OOIG] human gut metagenome; human gut
274
189
-
Leu
CAA
[ENA]
¡û
>WENV183771285
PPYE01454609
[PPYE] human gut metagenome; stool from patient with ulcerative colitis
9660
9575
-
Leu
CAA
[ENA]
¡û
>WENV170040733
CDYS01044393
[CDYS] gut metagenome; human stools
3284
3369
+
Leu
CAA
[ENA]
¡û
>WENV170042997
CDYU01023858
[CDYU] gut metagenome; human stools
1043
958
-
Leu
CAA
[ENA]
¡û
>WENV170059803
CDZH01061951
[CDZH] gut metagenome; human stools
10388
10303
-
Leu
CAA
[ENA]
¡û
>WENV170061132
CDZI01035797
[CDZI] gut metagenome; human stools
104
189
+
Leu
CAA
[ENA]
¡û
>WENV170074131
CDZS01041553
[CDZS] gut metagenome; human stools
1406
1321
-
Leu
CAA
[ENA]
¡û
>WENV170083666
CEAA01041146
[CEAA] gut metagenome; human stools
135
50
-
Leu
CAA
[ENA]
¡û
>WENV170102249
CEAX01008091
[CEAX] gut metagenome; human stools
7533
7618
+
Leu
CAA
[ENA]
¡û
>WENV170104981
CEAZ01057424
[CEAZ] gut metagenome; human stools
958
873
-
Leu
CAA
[ENA]
¡û
>WENV170106889
CEBY01019300
[CEBY] gut metagenome; human stools
831
746
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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