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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.180130 (4 seq.)
>WENV180763658
ODIA01002785
[ODIA] human metagenome; G_DNA_Tongue dorsum
1867
1785
-
Leu
TAA
[ENA]
¡û
>WENV180790726
ODIT01033138
[ODIT] human metagenome; G_DNA_Tongue dorsum
610
692
+
Leu
TAA
[ENA]
¡û
>WENV180821771
ODJS01054481
[ODJS] human metagenome; G_DNA_Tongue dorsum
175
93
-
Leu
TAA
[ENA]
¡û
>WENV180856826
ODKZ01089782
[ODKZ] human metagenome; G_DNA_Tongue dorsum
199
281
+
Leu
TAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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